FFCP PHASE1:Mm9::chr4:128916456..128916472,-: Difference between revisions
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{{FFCP|EntrezGene=97130|HGNC=|UniProt=A2A7S8|association_with_transcript=-38bp_to_ENSMUST00000097873_5end|description=CAGE_peak_5_at_C77080_5end|id=chr4:128916456..128916472,-|ontology_enrichment_celltype=CL:0000117!1.66e-07!23;CL:0000337!1.66e-07!23;CL:0000221!4.17e-07!44;CL:0000133!4.17e-07!44;CL:0002319!9.68e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-07,44;CL:0000133,1.40e-07,44;CL:0000117,4.07e-07,23;CL:0000337,4.07e-07,23;CL:0002319,4.24e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.92e-11!102;UBERON:0000924!1.92e-11!102;UBERON:0006601!1.92e-11!102;UBERON:0001017!9.30e-11!73;UBERON:0005743!9.30e-11!73;UBERON:0001049!2.54e-10!52;UBERON:0005068!2.54e-10!52;UBERON:0006241!2.54e-10!52;UBERON:0007135!2.54e-10!52;UBERON:0000073!6.08e-10!75;UBERON:0001016!6.08e-10!75;UBERON:0000033!1.29e-09!63;UBERON:0002616!3.21e-09!49;UBERON:0000955!1.23e-08!50;UBERON:0006238!1.23e-08!50;UBERON:0002346!4.54e-08!71;UBERON:0003075!4.54e-08!71;UBERON:0007284!4.54e-08!71;UBERON:0003056!4.05e-07!49;UBERON:0002780!5.77e-07!39;UBERON:0001890!5.77e-07!39;UBERON:0006240!5.77e-07!39;UBERON:0003080!7.08e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.13e-11,95;UBERON:0000924,2.13e-11,95;UBERON:0006601,2.13e-11,95;UBERON:0001017,1.03e-09,73;UBERON:0000073,2.20e-09,54;UBERON:0010371,2.79e-09,73;UBERON:0001016,3.99e-09,75;UBERON:0001049,2.25e-08,52;UBERON:0005068,2.25e-08,52;UBERON:0006241,2.25e-08,52;UBERON:0007135,2.25e-08,52|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,0.90739263392049,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0,0,0.86152399231815,0.430942465371778,0.570070258369122,1.00812051903972,0.665191531965914,3.17515336729816,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,6.25913075478431,2.18025156380447,1.97717564461025,2.3331587888914,3.21968769738334,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,3.1691570175309,2.71075625655306,7.11435836888911,0,0,0,2.09720077362883,1.92109152660777,0.933206510776299,1.08004750665353,0.630974884054146,4.57041575046086,1.98781686856452,0.857435594504678,0.958454710182364,0,3.30347642998166,1.27687338085188,1.38245879930619,1.84640802822271,2.56165402086747,1.04182674111352,2.51264699101243,1.68828783009504,2.75036845998258,1.47314292736834,1.99320353118744,0.931997229126503,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0,0,0.60289056221049,0.470354828542819,0.376999773989026,3.95511948374998,0.289198713839823,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.449371918214468,0.457500602818626,0.251308704225729,1.04294592115366,1.02286182932132,0.41557608911912,1.46017136760982,1.2220723662038,0.497627882440372,2.27450482590307,0,0.910843100738926,0.919608417733892,1.26043490863744,1.05493372485001,1.2246569847239,0.512454881139399,0.843315521037559,0.258703370739016,1.29340795759705,2.26927296201383,1.40760899331159,2.84954452155847,2.78047249225598,3.1342694986995,3.08673204611915,1.39323986772945,0,0.257347907114715,0,0,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.925602677324269,0,0.268273401399619,0.116765342367169,0,0,0,0,0.219550115291051,0,0.210289948564127,1.44066457330998,0.330418782983798,0.528901133327089,1.06644125267617,1.85789337488351,1.15980715189884,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.597423819763102,1.32767530667157,1.37098215131675,0,2.24016460629846,1.35766741017338,3.43665517462561,1.70738650235495,0.738050739898011,1.56998727841375,0.370191491765402,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.814824882210129,0.509235257325564,0.938760993154008,0.837531287209079,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,1.12385412991454,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0,0.395287777946524,0,0.425820255624806,0.890328018336276,2.11753047159649,0.659880491890142,0,0.728341908464944,2.11626489875326,1.50884063804718,0.590603785761546,0,0.516856586336442,0.363533729477506,1.42598951353889,0,0,0,1.02131881726136,1.8006109403131,1.55230420539305,1.71469628025274,1.41872186913819,2.14042581122485,1.64549020602121,1.2178597964584,1.87737366450968,4.44847348814022,0.441056796109924,1.81374878235628,4.19807509409354,1.74907482291652,1.43246812803764,1.47726809770555,0,1.29797711407357,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,1.89801596148681,1.01659733563424,1.72808545314882,1.46361807210128,1.31017538247707,1.21377911746339,0.661227645802687,1.83229159388821,0.518459893167171,0,0,1.49516546043979,0.330916980914195,0.388902376688095,0.774958940866387,0.844780627453891,0.469428954583016,0.5208175393758,0.314578033277133,0.241584120826006,0,0,1.21635129174099,1.54066435747241,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,1.58711268530648,3.99574716073316,2.6017018416748,3.18980771091749,1.35232715822533,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0,0.900642406448441,3.62513927187364,1.55328093525546,0.726511433089237,1.19707462020309,1.87806966329548,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,1.92551525755089,0,0.760437899670719,0.943131706930381,0.468207537349412,1.08842759088278,1.09127391015665,0.952587382566147,0.463537303779422,0,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.476872379894642,1.0174249164263,0.846984423737976,0.507687647350059,1.09756783723664,0,0.543216455383447,0.561142271657738,0.355905054372522,1.47756723563345,0.409231043169689,1.23949472948773,1.35034627686799,1.24905288968973,1.16965804222704,1.71896843238639,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p5@C77080}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=97130 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2A7S8 | |||
|association_with_transcript=-38bp_to_ENSMUST00000097873_5end | |||
|cluster_id=chr4:128916456..128916472,- | |||
|description=CAGE_peak_5_at_C77080_5end | |||
|id=chr4:128916456..128916472,- | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-07!23;CL:0000337!1.66e-07!23;CL:0000221!4.17e-07!44;CL:0000133!4.17e-07!44;CL:0002319!9.68e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-07,44;CL:0000133,1.40e-07,44;CL:0000117,4.07e-07,23;CL:0000337,4.07e-07,23;CL:0002319,4.24e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.92e-11!102;UBERON:0000924!1.92e-11!102;UBERON:0006601!1.92e-11!102;UBERON:0001017!9.30e-11!73;UBERON:0005743!9.30e-11!73;UBERON:0001049!2.54e-10!52;UBERON:0005068!2.54e-10!52;UBERON:0006241!2.54e-10!52;UBERON:0007135!2.54e-10!52;UBERON:0000073!6.08e-10!75;UBERON:0001016!6.08e-10!75;UBERON:0000033!1.29e-09!63;UBERON:0002616!3.21e-09!49;UBERON:0000955!1.23e-08!50;UBERON:0006238!1.23e-08!50;UBERON:0002346!4.54e-08!71;UBERON:0003075!4.54e-08!71;UBERON:0007284!4.54e-08!71;UBERON:0003056!4.05e-07!49;UBERON:0002780!5.77e-07!39;UBERON:0001890!5.77e-07!39;UBERON:0006240!5.77e-07!39;UBERON:0003080!7.08e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.13e-11,95;UBERON:0000924,2.13e-11,95;UBERON:0006601,2.13e-11,95;UBERON:0001017,1.03e-09,73;UBERON:0000073,2.20e-09,54;UBERON:0010371,2.79e-09,73;UBERON:0001016,3.99e-09,75;UBERON:0001049,2.25e-08,52;UBERON:0005068,2.25e-08,52;UBERON:0006241,2.25e-08,52;UBERON:0007135,2.25e-08,52 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,0.90739263392049,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0,0,0.86152399231815,0.430942465371778,0.570070258369122,1.00812051903972,0.665191531965914,3.17515336729816,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,6.25913075478431,2.18025156380447,1.97717564461025,2.3331587888914,3.21968769738334,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,3.1691570175309,2.71075625655306,7.11435836888911,0,0,0,2.09720077362883,1.92109152660777,0.933206510776299,1.08004750665353,0.630974884054146,4.57041575046086,1.98781686856452,0.857435594504678,0.958454710182364,0,3.30347642998166,1.27687338085188,1.38245879930619,1.84640802822271,2.56165402086747,1.04182674111352,2.51264699101243,1.68828783009504,2.75036845998258,1.47314292736834,1.99320353118744,0.931997229126503,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0,0,0.60289056221049,0.470354828542819,0.376999773989026,3.95511948374998,0.289198713839823,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.449371918214468,0.457500602818626,0.251308704225729,1.04294592115366,1.02286182932132,0.41557608911912,1.46017136760982,1.2220723662038,0.497627882440372,2.27450482590307,0,0.910843100738926,0.919608417733892,1.26043490863744,1.05493372485001,1.2246569847239,0.512454881139399,0.843315521037559,0.258703370739016,1.29340795759705,2.26927296201383,1.40760899331159,2.84954452155847,2.78047249225598,3.1342694986995,3.08673204611915,1.39323986772945,0,0.257347907114715,0,0,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.925602677324269,0,0.268273401399619,0.116765342367169,0,0,0,0,0.219550115291051,0,0.210289948564127,1.44066457330998,0.330418782983798,0.528901133327089,1.06644125267617,1.85789337488351,1.15980715189884,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.597423819763102,1.32767530667157,1.37098215131675,0,2.24016460629846,1.35766741017338,3.43665517462561,1.70738650235495,0.738050739898011,1.56998727841375,0.370191491765402,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.814824882210129,0.509235257325564,0.938760993154008,0.837531287209079,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,1.12385412991454,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0,0.395287777946524,0,0.425820255624806,0.890328018336276,2.11753047159649,0.659880491890142,0,0.728341908464944,2.11626489875326,1.50884063804718,0.590603785761546,0,0.516856586336442,0.363533729477506,1.42598951353889,0,0,0,1.02131881726136,1.8006109403131,1.55230420539305,1.71469628025274,1.41872186913819,2.14042581122485,1.64549020602121,1.2178597964584,1.87737366450968,4.44847348814022,0.441056796109924,1.81374878235628,4.19807509409354,1.74907482291652,1.43246812803764,1.47726809770555,0,1.29797711407357,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,1.89801596148681,1.01659733563424,1.72808545314882,1.46361807210128,1.31017538247707,1.21377911746339,0.661227645802687,1.83229159388821,0.518459893167171,0,0,1.49516546043979,0.330916980914195,0.388902376688095,0.774958940866387,0.844780627453891,0.469428954583016,0.5208175393758,0.314578033277133,0.241584120826006,0,0,1.21635129174099,1.54066435747241,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,1.58711268530648,3.99574716073316,2.6017018416748,3.18980771091749,1.35232715822533,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0,0.900642406448441,3.62513927187364,1.55328093525546,0.726511433089237,1.19707462020309,1.87806966329548,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,1.92551525755089,0,0.760437899670719,0.943131706930381,0.468207537349412,1.08842759088278,1.09127391015665,0.952587382566147,0.463537303779422,0,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.476872379894642,1.0174249164263,0.846984423737976,0.507687647350059,1.09756783723664,0,0.543216455383447,0.561142271657738,0.355905054372522,1.47756723563345,0.409231043169689,1.23949472948773,1.35034627686799,1.24905288968973,1.16965804222704,1.71896843238639,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p5@C77080 | |||
}} |
Latest revision as of 09:16, 26 September 2015
Short description: | p5@C77080 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_C77080_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENSMUST00000097873_5end |
EntrezGene: | C77080 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.40e-07 | 44 |
neurectodermal cell | 1.40e-07 | 44 |
CNS neuron (sensu Vertebrata) | 4.07e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.07e-07 | 23 |
neural cell | 4.24e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.13e-11 | 95 |
ectoderm | 2.13e-11 | 95 |
presumptive ectoderm | 2.13e-11 | 95 |
central nervous system | 1.03e-09 | 73 |
regional part of nervous system | 2.20e-09 | 54 |
ecto-epithelium | 2.79e-09 | 73 |
nervous system | 3.99e-09 | 75 |
neural tube | 2.25e-08 | 52 |
neural rod | 2.25e-08 | 52 |
future spinal cord | 2.25e-08 | 52 |
neural keel | 2.25e-08 | 52 |