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FFCP PHASE1:Mm9::chr10:79479441..79479478,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70719
|EntrezGene=70719
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-5bp_to_ENSMUST00000140974_5end
|association_with_transcript=-5bp_to_ENSMUST00000140974_5end
|cluster_id=chr10:79479441..79479478,+
|description=CAGE_peak_1_at_Hmha1_5end
|description=CAGE_peak_1_at_Hmha1_5end
|id=chr10:79479441..79479478,+
|id=chr10:79479441..79479478,+
|ontology_enrichment_celltype=CL:0000988!8.29e-15!32;CL:0002032!8.29e-15!32;CL:0000037!8.29e-15!32;CL:0000566!8.29e-15!32;CL:0000837!8.29e-15!32;CL:0002031!2.45e-13!25;CL:0000049!1.85e-09!19;CL:0002320!3.59e-09!46;CL:0000134!3.59e-09!46;CL:0000763!2.07e-08!16;CL:0000738!2.32e-08!17;CL:0002087!2.32e-08!17;CL:0000838!1.99e-07!12;CL:0000839!3.13e-07!13;CL:0000084!8.10e-07!11;CL:0000827!8.10e-07!11
|ontology_enrichment_celltype=CL:0000988!8.29e-15!32;CL:0002032!8.29e-15!32;CL:0000037!8.29e-15!32;CL:0000566!8.29e-15!32;CL:0000837!8.29e-15!32;CL:0002031!2.45e-13!25;CL:0000049!1.85e-09!19;CL:0002320!3.59e-09!46;CL:0000134!3.59e-09!46;CL:0000763!2.07e-08!16;CL:0000738!2.32e-08!17;CL:0002087!2.32e-08!17;CL:0000838!1.99e-07!12;CL:0000839!3.13e-07!13;CL:0000084!8.10e-07!11;CL:0000827!8.10e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000988,6.77e-15,32;CL:0002032,6.77e-15,32;CL:0000037,6.77e-15,32;CL:0000837,6.77e-15,32;CL:0002031,2.05e-13,25;CL:0000049,1.64e-09,19;CL:0002320,2.28e-09,46;CL:0000134,2.28e-09,46;CL:0000763,1.86e-08,16;CL:0000738,2.09e-08,17;CL:0002087,2.09e-08,17;CL:0000838,1.82e-07,12;CL:0000839,2.87e-07,13;CL:0000084,7.47e-07,11;CL:0000827,7.47e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.87e-21!70;UBERON:0002193!2.29e-19!48;UBERON:0002390!4.23e-18!45;UBERON:0003061!4.23e-18!45;UBERON:0005057!5.63e-12!51;UBERON:0004177!3.73e-10!29;UBERON:0003081!1.16e-09!88;UBERON:0001041!3.49e-09!92;UBERON:0002384!3.59e-09!46;UBERON:0000077!4.93e-09!97;UBERON:0002371!6.13e-09!16;UBERON:0001474!3.13e-08!22;UBERON:0004765!3.13e-08!22;UBERON:0001434!3.13e-08!22;UBERON:0000926!3.47e-08!193;UBERON:0004120!3.47e-08!193;UBERON:0006603!3.47e-08!193;UBERON:0003408!7.08e-08!24;UBERON:0002370!1.27e-07!23;UBERON:0000974!1.27e-07!23;UBERON:0004807!1.27e-07!23;UBERON:0005058!1.27e-07!23;UBERON:0003351!1.27e-07!23;UBERON:0009113!1.27e-07!23;UBERON:0003295!1.27e-07!23;UBERON:0009722!1.27e-07!23;UBERON:0005562!1.27e-07!23;UBERON:0007690!1.27e-07!23;UBERON:0006562!2.17e-07!24;UBERON:0001557!2.17e-07!24;UBERON:0001042!2.17e-07!24;UBERON:0008814!2.17e-07!24;UBERON:0009145!2.17e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.37e-20,48;UBERON:0002405,9.37e-20,48;UBERON:0002390,1.78e-18,45;UBERON:0003061,1.78e-18,45;UBERON:0004177,1.90e-10,29;UBERON:0005057,1.90e-10,29;UBERON:0001041,5.50e-10,80;UBERON:0000077,6.73e-10,35;UBERON:0002384,2.28e-09,46;UBERON:0003081,2.42e-09,87;UBERON:0002371,5.48e-09,16;UBERON:0001474,3.16e-08,22;UBERON:0004765,3.16e-08,22;UBERON:0001434,3.16e-08,22;UBERON:0003408,3.85e-08,24;UBERON:0002370,6.92e-08,23;UBERON:0000974,6.92e-08,23;UBERON:0004807,6.92e-08,23;UBERON:0005058,6.92e-08,23;UBERON:0003351,6.92e-08,23;UBERON:0009113,6.92e-08,23;UBERON:0003295,6.92e-08,23;UBERON:0009722,6.92e-08,23;UBERON:0005562,6.92e-08,23;UBERON:0007690,6.92e-08,23;UBERON:0006562,1.21e-07,24;UBERON:0001557,1.21e-07,24;UBERON:0001042,1.21e-07,24;UBERON:0008814,1.21e-07,24;UBERON:0009145,1.21e-07,24
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8.69353173144857,14.6392330851922,9.15758121336325,7.93163002592544,7.02200945649509,4.51801474093653,1.84130094602871,1.14579102687879,3.09335728218638,0.685082519770642,3.7769694869485,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0.103787347584177,3.99024873401031,4.78054096111576,2.91728060481953,3.5634237646757,5.33146174505041,5.55616819504038,3.7086310303001,5.13470735346904,6.06473308233114,3.29523089857312,6.41329560712659,4.96299989590377,4.86591158277006,4.93945033018274,5.23923060411381,4.28772005995965,4.62982129112892,6.59337441285291,4.71036544430071,8.57173130963539,4.61437096014278,5.24559617884106,2.90692833264657,6.21121910741182,4.73841804193388,4.93905526756486,7.10288220882176,4.07412341537585,6.73370725989286,4.27086065247027,3.94017929502254,5.32000356120596,4.95797891795091,6.36591816237767,1.74867404556562,8.4215379040347,8.16510005383534,7.46024495068489,10.3677966986172,12.9845987947436
|phase1_expression=1.28119077683835,0,0,0,0,0,0,447.670562371945,76.1666986840517,69.2830997913101,13.6974374580404,10.9287857823611,522.847029209902,585.192173792769,47.3015861778241,58.1104017408801,31.4802845157666,244.798640317992,224.319213378989,215.165553461601,17.9441342218757,75.6597048150746,61.3819504476498,23.3588937278374,21.3350631392468,0,0,0,2.09025761402011,4.53654233567875,5.54326276638262,78.1087728355346,54.7407660950267,15.8481681015439,0,0.166234645358492,0,288.368293577729,145.328374081427,174.333406743275,381.174004244097,365.429334452768,273.827839109571,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,248.150474359392,498.323791561794,428.183500107499,1.02903774414379,1.71920063963254,2.57836046138721,0.809265843438391,0,0.633831403506179,0,0,140.384355895898,151.296553472747,162.699946322657,58.4220215510889,36.1165207002261,0.311068836925433,0.675029691658453,0.210324961351382,1.71390590642282,3.53389665522582,0.857435594504678,0.0958454710182364,0,3.30347642998166,2.29837208553338,1.99688493233117,0.131886287730194,0.274462930807229,0,2.51264699101243,2.25105044012672,2.90316670775939,1.76777151284201,1.28134512719193,1.86399445825301,2.87759534666099,0.377857800533928,74.4951735963312,24.0918685554788,0,0.539703191637817,2.59910566979068,0.896053774194671,19.1004411379183,0,0,0,0.14084341977668,0,0,0,0,0,0,16.5566625592637,211.293313056092,14.1020032111584,2.4287945747259,2.43572382649713,2.7673859670727,2.71300752994721,4.11560474974967,2.89033160058254,0.741584903203122,15.6167305473505,103.499434578135,9.05894359705491,38.8681072490293,38.3051449976825,5.59175283654366,0.585561594023094,1.25668024088073,12.7728527604296,43.1334448221313,31.7948447426506,43.3309474319151,2.39665023047716,4.11750542536764,0.376963056338593,3.99795936442236,2.30143911597297,2.49345653471472,2.27137768294861,4.58277137326423,52.126520685629,3.53811861807145,1.68353484709179,1.30120442962704,0.459804208866946,1.62055916824814,1.50704817835715,1.08858398642125,1.15302348256365,1.78033276663485,1.81092359517311,1.07783996466421,1.13463648100692,1.75951124163949,2.84954452155847,2.50242524303038,3.83077383174383,3.08673204611915,0.59710280045548,39.3239384895411,45.8079274664193,69.3358938525246,2.48550927042602,3.04883877975425,0.540186184383045,1.42046841351126,1.18058539048442,1.69693824176116,0.465067889500816,1.3413670069981,3.38619492864792,1.48103864922132,4.43252153013557,5.91802309684747,7.01759939641595,7.02560368931362,9.39444931322602,3.99550902271842,1.44066457330998,14.8688452342709,3.43785736662608,1.49301775374664,1.62565670302307,1.67527699718721,1.4117846723634,1.11189021922435,1.52180500890047,4.2707615539006,1.81168850196412,7.79139147280835,5.17286827306992,4.48417400373976,8.08937467788799,4.10662294761919,6.17337947088538,0.948339504765408,1.71372768914593,1.1270773567308,1.01825663922657,0.581857461502877,1.68325967736765,1.64414996523069,2.95220295959204,1.72698600625512,2.46794327843601,10.9687472022245,14.6823693030163,14.1522476481506,12.5922782935518,19.0688514105193,23.153007336232,23.9348300674535,28.4819176076303,28.6979351391813,14.8263163121564,24.4405951096503,25.6777253891267,14.3537329632698,11.6186283855671,7.17589654087649,10.1313139486307,48.7748422039836,1.70542270593436,1.46668478797823,1.86719594352707,2.81628297946203,7.03526281255626,6.42717830392237,8.00047956216975,13.5566223931324,12.8449519996289,16.9022054776936,34.9028860344522,39.717545829156,32.5460381808401,180.949540727127,131.625175484128,11.3105782794378,19.591508987636,4.33486592967038,1.99259867206745,0,7.32165688892682,0,0,0,0,0,0,0,0,0,3.53453448063988,7.09700426041343,3.91744328067962,3.58351310577867,16.9919226661712,11.9470624505967,1.45668381692989,3.02323556964751,2.64047111658257,1.77181135728464,2.45948118355142,4.9101375701962,7.99774204850512,5.70395805415554,10.1131762539461,2.10837217149998,5.15677716240934,0.680879211507576,1.8006109403131,1.29358683782755,1.07168517515796,1.24138163549592,3.56737635204141,1.81003922662333,2.43571959291679,4.4587624532105,1.48282449604674,2.42581237860458,15.0046490176747,6.29711264114032,2.71408162176701,4.17803204010978,3.61109979439135,6.99554007911642,6.30446026835733,103.376882882701,28.6877746468879,43.5207139318822,50.8594833912666,100.06017469179,95.1717200539134,47.4239819682856,55.1408722155212,56.8001892336182,2.86401185404534,2.05618395827738,3.65975040828328,2.16010681643603,1.46361807210128,3.49380101993884,2.96701562046606,5.2898211664215,6.80565449158477,7.2584385043404,18.6401793926078,0.56369293868419,0.598066184175915,0.992750942742586,3.50012139019286,1.6790777052105,2.19642963138012,1.64300134104056,1.5624526181274,0.524296722128554,1.44950472495604,0.864090018773596,288.834164254155,21.0834223901771,38.5166089368102,60.2832618616969,100.075922878122,131.527056865197,155.65310712836,165.264580908352,169.926535262732,181.600820258865,214.053991045512,258.945589125522,287.673406504585,330.995386978203,3.62768613784338,0,0,0,8.69353173144857,14.6392330851922,9.15758121336325,7.93163002592544,7.02200945649509,4.51801474093653,1.84130094602871,1.14579102687879,3.09335728218638,0.685082519770642,3.7769694869485,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0.103787347584177,3.99024873401031,4.78054096111576,2.91728060481953,3.5634237646757,5.33146174505041,5.55616819504038,3.7086310303001,5.13470735346904,6.06473308233114,3.29523089857312,6.41329560712659,4.96299989590377,4.86591158277006,4.93945033018274,5.23923060411381,4.28772005995965,4.62982129112892,6.59337441285291,4.71036544430071,8.57173130963539,4.61437096014278,5.24559617884106,2.90692833264657,6.21121910741182,4.73841804193388,4.93905526756486,7.10288220882176,4.07412341537585,6.73370725989286,4.27086065247027,3.94017929502254,5.32000356120596,4.95797891795091,6.36591816237767,1.74867404556562,8.4215379040347,8.16510005383534,7.46024495068489,10.3677966986172,12.9845987947436
|short_description=p1@Hmha1
|short_description=p1@Hmha1
}}
}}

Latest revision as of 09:17, 26 September 2015

Short description:p1@Hmha1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmha1_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: -5bp_to_ENSMUST00000140974_5end
EntrezGene:Hmha1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hmha1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9447.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E776.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F269.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4522.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8585.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A358.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A531.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2244.80
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4224.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6215.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H275.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I961.38
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.34
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I378.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G654.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8288.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1145.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3174.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9381.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2365.43
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4273.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2248.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9498.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1428.18
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7140.38
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7151.30
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2162.70
Mouse Microglia, donor1.CNhs12629.11718-123C858.42
Mouse Microglia, donor2.CNhs12634.11736-123E836.12
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G374.50
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.56
accessory axillary lymph node, adult.CNhs10475.1063-29H9211.29
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H115.62
bone (os femoris), adult.CNhs10483.56-12G2103.50
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A638.87
bone (os femoris), neonate N20.CNhs11195.1350-25C338.31
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C743.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D443.33
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A252.13
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C839.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D245.81
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D569.34
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G15.92
heart, neonate N20.CNhs11127.821-26I67.02
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D29.39
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F814.68
liver, embryo E13.CNhs10524.378-3H614.15
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D719.07
liver, embryo E16.CNhs10523.462-17F523.15
liver, embryo E17.CNhs10510.481-18A323.93
liver, embryo E18.CNhs10579.499-43G428.48
liver, neonate N00.CNhs11117.641-24F428.70
liver, neonate N03.CNhs11123.1345-25G214.83
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H225.68
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A311.62
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B148.77
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E513.56
lung, neonate N07.CNhs11111.715-19A312.84
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A434.90
lung, neonate N25.CNhs11119.1359-25C739.72
lung, neonate N30.CNhs11133.1394-42H232.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1180.95
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1131.63
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H219.59
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G616.99
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C315.00
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G2103.38
spleen, embryo E16.CNhs11035.461-43C128.69
spleen, embryo E18.CNhs11011.1271-21F243.52
spleen, neonate N10.CNhs11116.752-24D150.86
spleen, neonate N20.CNhs11112.824-19H1100.06
spleen, neonate N25.CNhs11099.1354-25G395.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C647.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C955.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D356.80
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B5288.83
thymus, embryo E14.CNhs11041.402-44I421.08
thymus, embryo E15.CNhs11005.430-45I238.52
thymus, embryo E16.CNhs11002.456-26C560.28
thymus, embryo E17.CNhs10581.478-18C1100.08
thymus, embryo E18.CNhs10595.1273-19G4131.53
thymus, neonate N02.CNhs11181.1541-43F8155.65
thymus, neonate N03.CNhs11137.2104-43C7165.26
thymus, neonate N06.CNhs11197.681-26C4169.93
thymus, neonate N07.CNhs11211.713-19D3181.60
thymus, neonate N10.CNhs11194.748-24E4214.05
thymus, neonate N20.CNhs11186.820-7A2258.95
thymus, neonate N25.CNhs11125.1362-25G7287.67
thymus, neonate N30.CNhs11132.1393-42G2331.00
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F514.64
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system9.37e-2048
immune system9.37e-2048
hematopoietic system1.78e-1845
blood island1.78e-1845
hemopoietic organ1.90e-1029
immune organ1.90e-1029
foregut5.50e-1080
mixed endoderm/mesoderm-derived structure6.73e-1035
connective tissue2.28e-0946
lateral plate mesoderm2.42e-0987
bone marrow5.48e-0916
bone element3.16e-0822
skeletal element3.16e-0822
skeletal system3.16e-0822
gland of gut3.85e-0824
thymus6.92e-0823
neck6.92e-0823
respiratory system epithelium6.92e-0823
hemolymphoid system gland6.92e-0823
pharyngeal epithelium6.92e-0823
thymic region6.92e-0823
pharyngeal gland6.92e-0823
entire pharyngeal arch endoderm6.92e-0823
thymus primordium6.92e-0823
early pharyngeal endoderm6.92e-0823
pharynx1.21e-0724
upper respiratory tract1.21e-0724
chordate pharynx1.21e-0724
pharyngeal arch system1.21e-0724
pharyngeal region of foregut1.21e-0724
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