FFCP PHASE1:Mm9::chr7:25230607..25230629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210145 | |EntrezGene=210145 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z720 | |UniProt=D3Z720 | ||
|association_with_transcript=71bp_to_NM_199013,uc009fpp.1_5end | |association_with_transcript=71bp_to_NM_199013,uc009fpp.1_5end | ||
|cluster_id=chr7:25230607..25230629,- | |||
|description=CAGE_peak_2_at_Irgc1_5end | |description=CAGE_peak_2_at_Irgc1_5end | ||
|id=chr7:25230607..25230629,- | |id=chr7:25230607..25230629,- | ||
|ontology_enrichment_celltype=CL:0000553!1.51e-11!6;CL:0000556!1.51e-11!6;CL:0000414!2.27e-08!11;CL:0000050!1.57e-07!9 | |ontology_enrichment_celltype=CL:0000553!1.51e-11!6;CL:0000556!1.51e-11!6;CL:0000414!2.27e-08!11;CL:0000050!1.57e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.16e-27,6;CL:0000556,3.16e-27,6;CL:0000050,3.59e-18,9;CL:0000839,1.42e-12,13;CL:0000763,3.32e-10,16;CL:0002027,1.79e-09,3;CL:0002006,1.79e-09,3;CL:0002024,1.79e-09,3;CL:0002031,3.84e-09,25;CL:0000049,1.40e-08,19;CL:0000945,6.29e-08,1;CL:0000236,6.29e-08,1;CL:0000826,6.29e-08,1;CL:0000988,4.67e-07,32;CL:0002032,4.67e-07,32;CL:0000037,4.67e-07,32;CL:0000837,4.67e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.99e-10!6;UBERON:0004457!1.99e-10!6;UBERON:0000042!1.99e-10!6;UBERON:0004854!1.99e-10!6;UBERON:0009034!1.99e-10!6;UBERON:0002095!1.99e-10!6;UBERON:0004782!1.99e-10!6;UBERON:0003281!1.99e-10!6;UBERON:0009664!1.99e-10!6;UBERON:0002296!1.99e-10!6;UBERON:0005602!1.99e-10!6;UBERON:0001179!1.99e-10!6;UBERON:0006293!1.99e-10!6;UBERON:0003887!1.83e-08!10;UBERON:0002465!1.39e-07!3 | |ontology_enrichment_uberon=UBERON:0002106!1.99e-10!6;UBERON:0004457!1.99e-10!6;UBERON:0000042!1.99e-10!6;UBERON:0004854!1.99e-10!6;UBERON:0009034!1.99e-10!6;UBERON:0002095!1.99e-10!6;UBERON:0004782!1.99e-10!6;UBERON:0003281!1.99e-10!6;UBERON:0009664!1.99e-10!6;UBERON:0002296!1.99e-10!6;UBERON:0005602!1.99e-10!6;UBERON:0001179!1.99e-10!6;UBERON:0006293!1.99e-10!6;UBERON:0003887!1.83e-08!10;UBERON:0002465!1.39e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.65e-10,22;UBERON:0004765,2.65e-10,22;UBERON:0001434,2.65e-10,22;UBERON:0002371,3.32e-10,16;UBERON:0002106,5.47e-10,6;UBERON:0004457,5.47e-10,6;UBERON:0000042,5.47e-10,6;UBERON:0004854,5.47e-10,6;UBERON:0009034,5.47e-10,6;UBERON:0002095,5.47e-10,6;UBERON:0004782,5.47e-10,6;UBERON:0003281,5.47e-10,6;UBERON:0009664,5.47e-10,6;UBERON:0002296,5.47e-10,6;UBERON:0005602,5.47e-10,6;UBERON:0001179,5.47e-10,6;UBERON:0006293,5.47e-10,6;UBERON:0002193,6.25e-10,48;UBERON:0002405,6.25e-10,48;UBERON:0002390,2.12e-08,45;UBERON:0003061,2.12e-08,45;UBERON:0000029,9.86e-08,1;UBERON:0001097,9.86e-08,1;UBERON:0003968,9.86e-08,1;UBERON:0001467,9.86e-08,1;UBERON:0002204,5.74e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,8.70643649776252,0,45.4265518115862,34.141493967829,24.1902101524877,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,30.2008690903925,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.69663344023778,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,0.941842285023455,1.77702496037333,4.80434163733698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,8.70643649776252,0,45.4265518115862,34.141493967829,24.1902101524877,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,30.2008690903925,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.69663344023778,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,0.941842285023455,1.77702496037333,4.80434163733698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Irgc1 | |short_description=p2@Irgc1 | ||
}} | }} |
Latest revision as of 09:28, 26 September 2015
Short description: | p2@Irgc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Irgc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 71bp_to_NM_199013, uc009fpp.1_5end |
EntrezGene: | Irgc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.16e-27 | 6 |
megakaryocyte | 3.16e-27 | 6 |
megakaryocyte-erythroid progenitor cell | 3.59e-18 | 9 |
myeloid lineage restricted progenitor cell | 1.42e-12 | 13 |
myeloid cell | 3.32e-10 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.79e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.79e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.79e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 3.84e-09 | 25 |
common myeloid progenitor | 1.40e-08 | 19 |
lymphocyte of B lineage | 6.29e-08 | 1 |
B cell | 6.29e-08 | 1 |
pro-B cell | 6.29e-08 | 1 |
hematopoietic cell | 4.67e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.67e-07 | 32 |
hematopoietic stem cell | 4.67e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.67e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.65e-10 | 22 |
skeletal element | 2.65e-10 | 22 |
skeletal system | 2.65e-10 | 22 |
bone marrow | 3.32e-10 | 16 |
spleen | 5.47e-10 | 6 |
cavity lining | 5.47e-10 | 6 |
serous membrane | 5.47e-10 | 6 |
gastrointestinal system mesentery | 5.47e-10 | 6 |
stomach region | 5.47e-10 | 6 |
mesentery | 5.47e-10 | 6 |
gastrointestinal system serosa | 5.47e-10 | 6 |
mesentery of stomach | 5.47e-10 | 6 |
gut mesentery | 5.47e-10 | 6 |
dorsal mesentery | 5.47e-10 | 6 |
dorsal mesogastrium | 5.47e-10 | 6 |
peritoneal cavity | 5.47e-10 | 6 |
spleen primordium | 5.47e-10 | 6 |
hemolymphoid system | 6.25e-10 | 48 |
immune system | 6.25e-10 | 48 |
hematopoietic system | 2.12e-08 | 45 |
blood island | 2.12e-08 | 45 |
lymph node | 9.86e-08 | 1 |
axillary lymph node | 9.86e-08 | 1 |
peripheral lymph node | 9.86e-08 | 1 |
shoulder | 9.86e-08 | 1 |
musculoskeletal system | 5.74e-07 | 32 |