FFCP PHASE1:Mm9::chr17:35277182..35277194,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:35277182..35277194,+ to FFCP PHASE1:Mm9::chr17:35277182..35277194,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224727 | |EntrezGene=224727 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENSMUST00000173351_5end | |||
|cluster_id=chr17:35277182..35277194,+ | |||
|description=CAGE_peak_5_at_Bag6_5end | |||
|id=chr17:35277182..35277194,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.37e-13!50;CL:0002319!1.26e-12!43;CL:0000221!6.56e-12!44;CL:0000133!6.56e-12!44;CL:0000117!1.22e-11!23;CL:0000337!1.22e-11!23;CL:0000393!1.51e-11!39;CL:0000211!1.51e-11!39;CL:0000540!3.46e-10!33;CL:0000047!3.46e-10!33;CL:0000031!3.46e-10!33;CL:0000404!3.46e-10!33;CL:0002321!2.63e-07!70;CL:0000220!2.63e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.10e-15,43;CL:0000221,1.09e-14,44;CL:0000133,1.09e-14,44;CL:0000117,7.56e-14,23;CL:0000337,7.56e-14,23;CL:0000393,9.18e-14,39;CL:0000211,9.18e-14,39;CL:0000540,2.23e-12,33;CL:0000047,2.23e-12,33;CL:0000031,2.23e-12,33;CL:0000404,2.23e-12,33;CL:0002321,1.01e-11,70;CL:0000723,6.92e-09,91;CL:0000048,6.92e-09,91;CL:0000034,2.63e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.25e-13!73;UBERON:0005743!4.25e-13!73;UBERON:0000073!2.87e-12!75;UBERON:0001016!2.87e-12!75;UBERON:0002020!1.12e-10!34;UBERON:0001049!4.10e-09!52;UBERON:0005068!4.10e-09!52;UBERON:0006241!4.10e-09!52;UBERON:0007135!4.10e-09!52;UBERON:0004121!6.89e-09!102;UBERON:0000924!6.89e-09!102;UBERON:0006601!6.89e-09!102;UBERON:0000955!1.39e-08!50;UBERON:0006238!1.39e-08!50;UBERON:0002616!1.96e-08!49;UBERON:0002791!2.61e-08!29;UBERON:0003528!2.61e-08!29;UBERON:0001893!2.61e-08!29;UBERON:0002346!3.68e-08!71;UBERON:0003075!3.68e-08!71;UBERON:0007284!3.68e-08!71;UBERON:0003080!3.58e-07!40;UBERON:0002780!4.57e-07!39;UBERON:0001890!4.57e-07!39;UBERON:0006240!4.57e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.68e-14,73;UBERON:0001016,3.13e-13,75;UBERON:0002020,3.60e-13,34;UBERON:0000073,2.34e-11,54;UBERON:0003528,3.11e-10,29;UBERON:0002791,3.11e-10,29;UBERON:0001893,3.11e-10,29;UBERON:0001049,3.04e-09,52;UBERON:0005068,3.04e-09,52;UBERON:0006241,3.04e-09,52;UBERON:0007135,3.04e-09,52;UBERON:0004121,4.69e-09,95;UBERON:0000924,4.69e-09,95;UBERON:0006601,4.69e-09,95;UBERON:0002346,6.64e-08,64;UBERON:0003075,6.64e-08,64;UBERON:0007284,6.64e-08,64;UBERON:0000955,1.81e-07,47;UBERON:0006238,1.81e-07,47;UBERON:0000956,2.58e-07,21;UBERON:0001869,2.58e-07,21;UBERON:0000203,2.58e-07,21;UBERON:0002616,2.71e-07,46;UBERON:0003080,2.83e-07,40;UBERON:0002780,3.83e-07,39;UBERON:0001890,3.83e-07,39;UBERON:0006240,3.83e-07,39 | |||
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| ||
|short_description=p5@Bag6 | |||
}} | }} |
Latest revision as of 09:37, 26 September 2015
Short description: | p5@Bag6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bag6_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENSMUST00000173351_5end |
EntrezGene: | Bag6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.10e-15 | 43 |
ectodermal cell | 1.09e-14 | 44 |
neurectodermal cell | 1.09e-14 | 44 |
CNS neuron (sensu Vertebrata) | 7.56e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.56e-14 | 23 |
electrically responsive cell | 9.18e-14 | 39 |
electrically active cell | 9.18e-14 | 39 |
neuron | 2.23e-12 | 33 |
neuronal stem cell | 2.23e-12 | 33 |
neuroblast | 2.23e-12 | 33 |
electrically signaling cell | 2.23e-12 | 33 |
embryonic cell | 1.01e-11 | 70 |
somatic stem cell | 6.92e-09 | 91 |
multi fate stem cell | 6.92e-09 | 91 |
stem cell | 2.63e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.68e-14 | 73 |
nervous system | 3.13e-13 | 75 |
gray matter | 3.60e-13 | 34 |
regional part of nervous system | 2.34e-11 | 54 |
brain grey matter | 3.11e-10 | 29 |
regional part of telencephalon | 3.11e-10 | 29 |
telencephalon | 3.11e-10 | 29 |
neural tube | 3.04e-09 | 52 |
neural rod | 3.04e-09 | 52 |
future spinal cord | 3.04e-09 | 52 |
neural keel | 3.04e-09 | 52 |
ectoderm-derived structure | 4.69e-09 | 95 |
ectoderm | 4.69e-09 | 95 |
presumptive ectoderm | 4.69e-09 | 95 |
neurectoderm | 6.64e-08 | 64 |
neural plate | 6.64e-08 | 64 |
presumptive neural plate | 6.64e-08 | 64 |
brain | 1.81e-07 | 47 |
future brain | 1.81e-07 | 47 |
cerebral cortex | 2.58e-07 | 21 |
cerebral hemisphere | 2.58e-07 | 21 |
pallium | 2.58e-07 | 21 |
regional part of brain | 2.71e-07 | 46 |
anterior neural tube | 2.83e-07 | 40 |
regional part of forebrain | 3.83e-07 | 39 |
forebrain | 3.83e-07 | 39 |
future forebrain | 3.83e-07 | 39 |