FFCP PHASE1:Mm9::chr4:129419424..129419433,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:129419424..129419433,-
|short_description=p4@Khdrbs1
|description=CAGE_peak_4_at_Khdrbs1_5end
|association_with_transcript=92bp_to_uc008uyc.1,uc008uyd.1,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20218 | |EntrezGene=20218 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=Q60749 | |UniProt=Q60749 | ||
|association_with_transcript=92bp_to_uc008uyc.1,uc008uyd.1,uc008uye.1_5end | |||
|cluster_id=chr4:129419424..129419433,- | |||
|description=CAGE_peak_4_at_Khdrbs1_5end | |||
|id=chr4:129419424..129419433,- | |||
|ontology_enrichment_celltype=CL:0000791!3.50e-07!9;CL:0000789!3.50e-07!9;CL:0002420!3.50e-07!9;CL:0002419!3.50e-07!9;CL:0000790!3.50e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-18,9;CL:0000789,1.21e-18,9;CL:0002420,1.21e-18,9;CL:0002419,1.21e-18,9;CL:0000790,1.21e-18,9;CL:0000624,8.55e-17,8;CL:0000838,3.02e-16,12;CL:0000084,6.69e-15,11;CL:0000827,6.69e-15,11;CL:0000542,7.96e-15,13;CL:0000051,7.96e-15,13;CL:0000893,8.34e-13,6;CL:0002489,8.34e-13,6;CL:0000898,8.34e-13,6;CL:0000809,8.34e-13,6;CL:0000810,8.34e-13,6;CL:0000895,8.34e-13,6;CL:0000808,8.34e-13,6;CL:0000894,8.34e-13,6;CL:0000806,8.34e-13,6;CL:0000807,8.34e-13,6;CL:0000805,8.34e-13,6;CL:0002425,8.34e-13,6;CL:0002436,8.34e-13,6;CL:0002427,8.34e-13,6;CL:0002428,8.34e-13,6;CL:0002429,8.34e-13,6;CL:0002433,8.34e-13,6;CL:0002431,8.34e-13,6;CL:0002432,8.34e-13,6;CL:0000738,8.06e-11,17;CL:0002087,8.06e-11,17;CL:0000988,3.35e-08,32;CL:0002032,3.35e-08,32;CL:0000037,3.35e-08,32;CL:0000837,3.35e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.18e-12!23;UBERON:0000974!9.18e-12!23;UBERON:0004807!9.18e-12!23;UBERON:0005058!9.18e-12!23;UBERON:0003351!9.18e-12!23;UBERON:0009113!9.18e-12!23;UBERON:0003295!9.18e-12!23;UBERON:0009722!9.18e-12!23;UBERON:0005562!9.18e-12!23;UBERON:0007690!9.18e-12!23;UBERON:0006562!1.12e-10!24;UBERON:0003408!1.12e-10!24;UBERON:0001557!1.12e-10!24;UBERON:0001042!1.12e-10!24;UBERON:0008814!1.12e-10!24;UBERON:0009145!1.12e-10!24;UBERON:0000072!1.27e-09!27;UBERON:0004177!3.13e-09!29;UBERON:0000153!7.71e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.11e-31,23;UBERON:0000974,3.11e-31,23;UBERON:0004807,3.11e-31,23;UBERON:0005058,3.11e-31,23;UBERON:0003351,3.11e-31,23;UBERON:0009113,3.11e-31,23;UBERON:0003295,3.11e-31,23;UBERON:0009722,3.11e-31,23;UBERON:0005562,3.11e-31,23;UBERON:0007690,3.11e-31,23;UBERON:0006562,1.02e-29,24;UBERON:0003408,1.02e-29,24;UBERON:0001557,1.02e-29,24;UBERON:0001042,1.02e-29,24;UBERON:0008814,1.02e-29,24;UBERON:0009145,1.02e-29,24;UBERON:0000072,7.71e-26,27;UBERON:0004177,1.06e-23,29;UBERON:0005057,1.06e-23,29;UBERON:0000077,8.59e-21,35;UBERON:0007811,5.07e-20,36;UBERON:0000153,1.21e-17,43;UBERON:0000065,2.81e-15,41;UBERON:0002390,6.19e-15,45;UBERON:0003061,6.19e-15,45;UBERON:0001004,8.54e-15,42;UBERON:0002193,1.12e-13,48;UBERON:0002405,1.12e-13,48;UBERON:0003929,1.40e-12,55;UBERON:0002368,4.36e-11,60;UBERON:0000490,1.24e-10,66;UBERON:0002530,7.89e-10,65;UBERON:0005911,5.86e-09,69;UBERON:0000949,2.26e-08,72;UBERON:0003081,1.44e-07,87;UBERON:0001041,4.95e-07,80 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,3.09895976259783,16.1907030474417,20.8317428426574,2.39705155515707,2.6324812468461,2.05440875917447,2.27293046289393,0.333109761815663,0,0.699561878128147,0.630924330716475,0.822686601634433,0.42438965179803,1.53077922271926,0.496454756004426,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,1.00669563634642,6.5282592781021,2.68875039313971,0,0,1.03134418455488,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0,0.220868540951614,0.367472397644862,0.479227355091182,0.919218786610021,0,0.127687338085188,0.307213066512487,0.527545150920775,0.365950574409639,0.52091337055676,0.558365998002762,0,0.15279824777681,0.294628585473668,0,0.559198337475902,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0.340860645156116,0,0,0.281686839553361,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.776813650941515,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.251333182659351,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,1.04723353406728,0,0.958520996047362,2.39961092397363,1.27070227073065,0.149790639404823,2.28750301409313,1.13088916901578,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.407357455401265,0.124406970610093,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.816437989815934,0.640568601424249,1.12442069471675,0,1.29340795759705,0.378212160335639,0.527853372491847,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0,0,0.162137619091711,0,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.948339504765408,0.456994050438915,0,0.203651327845314,0.581857461502877,0.771494018793504,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0,0.287696137450811,1.13494658742525,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0.321101179975584,0.468846746368813,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0,0.566153061577665,0.809621403349789,1.16902343164525,0,0.642642632843614,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,0,0,0.164549020602121,0.608929898229199,0.704015124191131,0.42366414172764,0.441056796109924,0,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,2.37969801991397,1.6794174278839,3.59319931891502,0,0.632671987162271,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,4.50954350947352,0.897099276263873,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0.704143431874524,0,1.25831213310853,2.65742532908607,2.01621004380506,6.00421129193539,0.810900861160657,0.513554785824136,1.29920822977795,2.32734704367726,2.98022032171897,4.56742708175882,3.54454865218985,4.54349024766664,5.71551049912499,5.34378781225255,7.01696741326217,4.52195655709548,6.89573722871257,0,0.221985953374065,0.358855426437903,0.335769232728157,0.386379188064381,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0,0.214871054048298,1.14772999241306,0,0.231867835620421 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,3.09895976259783,16.1907030474417,20.8317428426574,2.39705155515707,2.6324812468461,2.05440875917447,2.27293046289393,0.333109761815663,0,0.699561878128147,0.630924330716475,0.822686601634433,0.42438965179803,1.53077922271926,0.496454756004426,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,1.00669563634642,6.5282592781021,2.68875039313971,0,0,1.03134418455488,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0,0.220868540951614,0.367472397644862,0.479227355091182,0.919218786610021,0,0.127687338085188,0.307213066512487,0.527545150920775,0.365950574409639,0.52091337055676,0.558365998002762,0,0.15279824777681,0.294628585473668,0,0.559198337475902,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0.340860645156116,0,0,0.281686839553361,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.776813650941515,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.251333182659351,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,1.04723353406728,0,0.958520996047362,2.39961092397363,1.27070227073065,0.149790639404823,2.28750301409313,1.13088916901578,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.407357455401265,0.124406970610093,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.816437989815934,0.640568601424249,1.12442069471675,0,1.29340795759705,0.378212160335639,0.527853372491847,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0,0,0.162137619091711,0,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.948339504765408,0.456994050438915,0,0.203651327845314,0.581857461502877,0.771494018793504,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0,0.287696137450811,1.13494658742525,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0.321101179975584,0.468846746368813,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0,0.566153061577665,0.809621403349789,1.16902343164525,0,0.642642632843614,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,0,0,0.164549020602121,0.608929898229199,0.704015124191131,0.42366414172764,0.441056796109924,0,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,2.37969801991397,1.6794174278839,3.59319931891502,0,0.632671987162271,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,4.50954350947352,0.897099276263873,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0.704143431874524,0,1.25831213310853,2.65742532908607,2.01621004380506,6.00421129193539,0.810900861160657,0.513554785824136,1.29920822977795,2.32734704367726,2.98022032171897,4.56742708175882,3.54454865218985,4.54349024766664,5.71551049912499,5.34378781225255,7.01696741326217,4.52195655709548,6.89573722871257,0,0.221985953374065,0.358855426437903,0.335769232728157,0.386379188064381,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0,0.214871054048298,1.14772999241306,0,0.231867835620421 | ||
|short_description=p4@Khdrbs1 | |||
}} | }} |
Latest revision as of 09:43, 26 September 2015
Short description: | p4@Khdrbs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Khdrbs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 92bp_to_uc008uyc.1, uc008uyd.1, uc008uye.1_5end |
EntrezGene: | Khdrbs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data