FFCP PHASE1:Mm9::chr10:79862175..79862221,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:79862175..79862221,-
|short_description=p1@Mbd3
|description=CAGE_peak_1_at_Mbd3_5end
|association_with_transcript=2bp_to_NM_013595,uc007gdb.1_5end
|Entr...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17192 | |EntrezGene=17192 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2D8 | |UniProt=Q9Z2D8 | ||
|association_with_transcript=2bp_to_NM_013595,uc007gdb.1_5end | |||
|cluster_id=chr10:79862175..79862221,- | |||
|description=CAGE_peak_1_at_Mbd3_5end | |||
|id=chr10:79862175..79862221,- | |||
|ontology_enrichment_celltype=CL:0000221!2.77e-15!44;CL:0000133!2.77e-15!44;CL:0002319!8.79e-15!43;CL:0000055!3.92e-14!50;CL:0002321!1.13e-12!70;CL:0000220!1.13e-12!70;CL:0000548!3.64e-10!115;CL:0000004!3.64e-10!115;CL:0000255!3.64e-10!115;CL:0000117!2.50e-09!23;CL:0000337!2.50e-09!23;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33;CL:0000393!4.76e-09!39;CL:0000211!4.76e-09!39;CL:0002371!8.32e-09!118;CL:0000144!5.24e-08!121;CL:0000012!5.24e-08!121;CL:0000333!2.88e-07!10;CL:0000095!2.88e-07!10;CL:0000243!2.88e-07!10;CL:0000123!2.88e-07!10;CL:0000125!2.88e-07!10;CL:0000030!2.88e-07!10;CL:0000339!2.88e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.77e-15,44;CL:0000133,2.77e-15,44;CL:0002319,8.79e-15,43;CL:0002321,1.13e-12,70;CL:0000117,2.50e-09,23;CL:0000337,2.50e-09,23;CL:0000540,3.56e-09,33;CL:0000047,3.56e-09,33;CL:0000031,3.56e-09,33;CL:0000404,3.56e-09,33;CL:0000393,4.76e-09,39;CL:0000211,4.76e-09,39;CL:0000333,2.88e-07,10;CL:0000095,2.88e-07,10;CL:0000243,2.88e-07,10;CL:0000123,2.88e-07,10;CL:0000125,2.88e-07,10;CL:0000030,2.88e-07,10;CL:0000339,2.88e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.02e-08!75;UBERON:0001016!6.02e-08!75;UBERON:0001017!3.09e-07!73;UBERON:0005743!3.09e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.02e-08,75;UBERON:0001017,3.09e-07,73 | |||
|phase1_expression=21.780243206252,4.53668029931169,5.91499011206397,6.0492842261366,9.5170188689806,18.1309613664841,14.9512089981136,11.6210991097419,3.801295498095,2.80877431586392,8.56089841127525,6.78063351460359,13.1824562047028,11.4520727168887,6.66219523631325,9.11138703254217,9.09430441566591,8.04428521663506,9.04955261797876,9.76096199135469,14.627445905984,14.3971879241284,10.9703911438353,8.15961356246374,11.4704640533585,7.46501553349526,10.7690499039769,13.3592164265251,6.08074942260396,8.31699428207772,13.7472916606289,17.14582818341,19.0670084151217,0,15.0202842270663,16.2909952451323,15.7210404322024,5.02237956884289,8.5946887897618,5.75876118371178,4.1176204162171,6.14740936462601,8.25367600152961,9.56815816614387,12.6721164024393,15.9685674380663,35.9900018400098,28.5612954858385,25.9229695626677,21.1928589990969,21.6978953519312,27.3129872293446,12.080347636157,13.0565185562042,17.4768775554081,19.294457702696,11.4613375975503,13.4074743992135,17.601532094785,18.5146842745212,17.1134478946668,29.4794742900145,34.6824970483344,41.3953869949444,25.7105254267413,51.8650483910653,35.9520132622086,45.3377600279434,23.226473157099,19.7108669964268,20.4015212510841,25.1372866275347,18.7738259808871,15.923803897944,26.0699681169603,20.2228133054205,11.0115880999389,20.3022867555448,18.7399970572617,16.8814448294648,27.0803425063133,18.2319679694866,26.2432019061298,25.8870800614573,22.6141406709679,10.606629077052,16.0879999302986,14.7255562201987,20.5217983932929,19.2707478272303,6.66688324013859,11.185510400758,9.51959867190851,17.2705021324101,11.0461990966104,8.06448396775204,16.5724415755467,22.1559419351475,27.797102492507,24.3804306412135,19.9997656082886,17.9657068380045,45.8649431471962,78.2173373468664,13.8554266247177,12.1612735428047,11.62706223534,11.6467557313441,4.40194402200192,11.1331604298619,17.6955033301459,7.91610243611567,16.3737003051802,15.8258772580254,6.46737889246376,13.6976584549346,6.92145909656247,5.63937491987655,3.5384422077995,16.6619855445831,11.4837589599405,7.27312879702833,3.72783522436244,8.19786231632332,13.4045892360611,4.85368404896324,8.98613433794402,24.5960119707297,11.5633906636489,11.0845073159569,6.40500843946077,12.6910895633993,12.5153510538439,19.4343747571051,13.2984348518118,14.2772311499627,15.2759045775474,8.9573018839267,11.1198013710817,7.57590681191306,11.5807194236806,16.0931473103431,12.6043490863744,11.0014517020072,9.0488543871266,8.96796041993949,14.1489604085191,5.17406741478031,17.0298714416945,10.4008344092301,10.7330185740009,12.4941567483718,8.61946472599353,9.4028084960985,10.0833246839892,12.5391588095651,8.42655824775882,12.610047448621,16.76564646434,12.0132948070591,15.4787199587523,15.3052752241863,11.1270025725049,17.1184881620241,12.3413690309903,13.7195027402741,12.8771232671817,13.8950757416932,20.5699812391851,16.0884114797513,13.0520783368828,12.7193989060039,7.90380415047782,14.4942932261202,11.3556572224629,11.7311258112384,2.97376904685418,4.49565963328025,11.9441420299731,11.6118335930219,9.14958975386863,6.85723983719365,7.78323153457046,5.51654315726422,8.0669940462567,9.55253937399263,8.04272668160862,9.15199771389294,9.35827618171777,6.29173586057955,6.48414149624083,7.76650965692032,12.5180814629034,14.738058126655,2.25415471346161,10.1825663922657,7.5641469995374,9.67874314486396,12.2678882021059,12.251642282307,9.10592621479974,12.7099078839455,12.1545577105731,11.0117769772622,16.7075145846223,13.7165888554761,13.1859078902527,9.40590923034426,12.9859184408524,10.0693648107784,7.94462611197673,14.0026320725922,8.62609239164127,14.5134969590716,15.9139213288426,13.3866805311969,13.6342034276653,17.8504102904446,8.12914036733061,18.9491411770485,11.7334783038259,14.7678224624414,13.6120344007331,11.3904255060435,9.52174563544055,13.8544889979037,8.6699329258405,10.1873757238436,9.40783135079174,10.651115456523,14.1601685130034,11.1379775107764,12.0633027151418,8.15858525728064,11.3105782794378,16.0043312856745,9.31193421929193,12.8932855251423,12.131185957874,16.915552122693,19.2460013843917,15.2271110275689,12.2791336707695,11.4705023017225,13.3679204449436,17.5507449089076,14.1683745586213,9.9366991689846,9.48690667071656,9.96096080907602,9.08416545332919,19.0530195923963,13.3567306669932,8.24850614862677,23.8941249011933,10.9251286269742,13.6045600634138,12.6365403436452,14.4697927511579,14.4494519533646,13.6966995379157,13.0872142611902,14.2598951353889,13.5895805912401,28.4630243152497,26.8152412445286,9.87274856685985,13.8647042404109,20.8267480890235,15.2179294872431,10.2857335512519,11.9507107793387,14.973960874793,14.6143175575008,11.7335854031855,10.8034356140548,13.8932890774626,12.8611277294354,7.75029248140347,12.1832108354875,19.0995750405018,13.7878355785851,7.28702091574627,12.0526446306831,9.7396402054776,13.4151464176095,7.9633646768976,7.15800136617826,10.2520670790769,8.46479240864134,8.32894306969891,9.93655311497972,9.39759821870082,4.77335309007557,13.6024477239888,11.5892096262304,11.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| |phase1_expression=21.780243206252,4.53668029931169,5.91499011206397,6.0492842261366,9.5170188689806,18.1309613664841,14.9512089981136,11.6210991097419,3.801295498095,2.80877431586392,8.56089841127525,6.78063351460359,13.1824562047028,11.4520727168887,6.66219523631325,9.11138703254217,9.09430441566591,8.04428521663506,9.04955261797876,9.76096199135469,14.627445905984,14.3971879241284,10.9703911438353,8.15961356246374,11.4704640533585,7.46501553349526,10.7690499039769,13.3592164265251,6.08074942260396,8.31699428207772,13.7472916606289,17.14582818341,19.0670084151217,0,15.0202842270663,16.2909952451323,15.7210404322024,5.02237956884289,8.5946887897618,5.75876118371178,4.1176204162171,6.14740936462601,8.25367600152961,9.56815816614387,12.6721164024393,15.9685674380663,35.9900018400098,28.5612954858385,25.9229695626677,21.1928589990969,21.6978953519312,27.3129872293446,12.080347636157,13.0565185562042,17.4768775554081,19.294457702696,11.4613375975503,13.4074743992135,17.601532094785,18.5146842745212,17.1134478946668,29.4794742900145,34.6824970483344,41.3953869949444,25.7105254267413,51.8650483910653,35.9520132622086,45.3377600279434,23.226473157099,19.7108669964268,20.4015212510841,25.1372866275347,18.7738259808871,15.923803897944,26.0699681169603,20.2228133054205,11.0115880999389,20.3022867555448,18.7399970572617,16.8814448294648,27.0803425063133,18.2319679694866,26.2432019061298,25.8870800614573,22.6141406709679,10.606629077052,16.0879999302986,14.7255562201987,20.5217983932929,19.2707478272303,6.66688324013859,11.185510400758,9.51959867190851,17.2705021324101,11.0461990966104,8.06448396775204,16.5724415755467,22.1559419351475,27.797102492507,24.3804306412135,19.9997656082886,17.9657068380045,45.8649431471962,78.2173373468664,13.8554266247177,12.1612735428047,11.62706223534,11.6467557313441,4.40194402200192,11.1331604298619,17.6955033301459,7.91610243611567,16.3737003051802,15.8258772580254,6.46737889246376,13.6976584549346,6.92145909656247,5.63937491987655,3.5384422077995,16.6619855445831,11.4837589599405,7.27312879702833,3.72783522436244,8.19786231632332,13.4045892360611,4.85368404896324,8.98613433794402,24.5960119707297,11.5633906636489,11.0845073159569,6.40500843946077,12.6910895633993,12.5153510538439,19.4343747571051,13.2984348518118,14.2772311499627,15.2759045775474,8.9573018839267,11.1198013710817,7.57590681191306,11.5807194236806,16.0931473103431,12.6043490863744,11.0014517020072,9.0488543871266,8.96796041993949,14.1489604085191,5.17406741478031,17.0298714416945,10.4008344092301,10.7330185740009,12.4941567483718,8.61946472599353,9.4028084960985,10.0833246839892,12.5391588095651,8.42655824775882,12.610047448621,16.76564646434,12.0132948070591,15.4787199587523,15.3052752241863,11.1270025725049,17.1184881620241,12.3413690309903,13.7195027402741,12.8771232671817,13.8950757416932,20.5699812391851,16.0884114797513,13.0520783368828,12.7193989060039,7.90380415047782,14.4942932261202,11.3556572224629,11.7311258112384,2.97376904685418,4.49565963328025,11.9441420299731,11.6118335930219,9.14958975386863,6.85723983719365,7.78323153457046,5.51654315726422,8.0669940462567,9.55253937399263,8.04272668160862,9.15199771389294,9.35827618171777,6.29173586057955,6.48414149624083,7.76650965692032,12.5180814629034,14.738058126655,2.25415471346161,10.1825663922657,7.5641469995374,9.67874314486396,12.2678882021059,12.251642282307,9.10592621479974,12.7099078839455,12.1545577105731,11.0117769772622,16.7075145846223,13.7165888554761,13.1859078902527,9.40590923034426,12.9859184408524,10.0693648107784,7.94462611197673,14.0026320725922,8.62609239164127,14.5134969590716,15.9139213288426,13.3866805311969,13.6342034276653,17.8504102904446,8.12914036733061,18.9491411770485,11.7334783038259,14.7678224624414,13.6120344007331,11.3904255060435,9.52174563544055,13.8544889979037,8.6699329258405,10.1873757238436,9.40783135079174,10.651115456523,14.1601685130034,11.1379775107764,12.0633027151418,8.15858525728064,11.3105782794378,16.0043312856745,9.31193421929193,12.8932855251423,12.131185957874,16.915552122693,19.2460013843917,15.2271110275689,12.2791336707695,11.4705023017225,13.3679204449436,17.5507449089076,14.1683745586213,9.9366991689846,9.48690667071656,9.96096080907602,9.08416545332919,19.0530195923963,13.3567306669932,8.24850614862677,23.8941249011933,10.9251286269742,13.6045600634138,12.6365403436452,14.4697927511579,14.4494519533646,13.6966995379157,13.0872142611902,14.2598951353889,13.5895805912401,28.4630243152497,26.8152412445286,9.87274856685985,13.8647042404109,20.8267480890235,15.2179294872431,10.2857335512519,11.9507107793387,14.973960874793,14.6143175575008,11.7335854031855,10.8034356140548,13.8932890774626,12.8611277294354,7.75029248140347,12.1832108354875,19.0995750405018,13.7878355785851,7.28702091574627,12.0526446306831,9.7396402054776,13.4151464176095,7.9633646768976,7.15800136617826,10.2520670790769,8.46479240864134,8.32894306969891,9.93655311497972,9.39759821870082,4.77335309007557,13.6024477239888,11.5892096262304,11.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| ||
|short_description=p1@Mbd3 | |||
}} | }} |
Latest revision as of 09:55, 26 September 2015
Short description: | p1@Mbd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mbd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_NM_013595, uc007gdb.1_5end |
EntrezGene: | Mbd3 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.77e-15 | 44 |
neurectodermal cell | 2.77e-15 | 44 |
neural cell | 8.79e-15 | 43 |
embryonic cell | 1.13e-12 | 70 |
CNS neuron (sensu Vertebrata) | 2.50e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-09 | 23 |
neuron | 3.56e-09 | 33 |
neuronal stem cell | 3.56e-09 | 33 |
neuroblast | 3.56e-09 | 33 |
electrically signaling cell | 3.56e-09 | 33 |
electrically responsive cell | 4.76e-09 | 39 |
electrically active cell | 4.76e-09 | 39 |
migratory neural crest cell | 2.88e-07 | 10 |
neuron associated cell | 2.88e-07 | 10 |
glial cell (sensu Vertebrata) | 2.88e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.88e-07 | 10 |
glial cell | 2.88e-07 | 10 |
glioblast | 2.88e-07 | 10 |
glioblast (sensu Vertebrata) | 2.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.02e-08 | 75 |
central nervous system | 3.09e-07 | 73 |