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FFCP PHASE1:Mm9::chr4:130348428..130348582,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:130348428..130348582,+
|DHSsupport=NA
|short_description=p1@Sdc3
|DPIdataset=NA
|description=CAGE_peak_1_at_Sdc3_5end
|association_with_transcript=0bp_to_ENSMUST00000070478,NM_011520,uc008uzr.1_5end
|EntrezGene=20970
|EntrezGene=20970
|HGNC=
|HGNC=
|MCL_coexpression_id=1801
|TSSclassifier=NA
|UniProt=Q64519,B1ASF5
|UniProt=Q64519,B1ASF5
|association_with_transcript=0bp_to_ENSMUST00000070478,NM_011520,uc008uzr.1_5end
|cluster_id=chr4:130348428..130348582,+
|description=CAGE_peak_1_at_Sdc3_5end
|id=chr4:130348428..130348582,+
|ontology_enrichment_celltype=CL:0000117!3.71e-12!23;CL:0000337!3.71e-12!23;CL:0000055!2.44e-11!50;CL:0002319!2.57e-11!43;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0000540!3.27e-11!33;CL:0000047!3.27e-11!33;CL:0000031!3.27e-11!33;CL:0000404!3.27e-11!33;CL:0000393!9.11e-11!39;CL:0000211!9.11e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-12,23;CL:0000337,3.69e-12,23;CL:0002319,2.55e-11,43;CL:0000221,2.73e-11,44;CL:0000133,2.73e-11,44;CL:0000540,3.25e-11,33;CL:0000047,3.25e-11,33;CL:0000031,3.25e-11,33;CL:0000404,3.25e-11,33;CL:0000393,9.07e-11,39;CL:0000211,9.07e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.27e-19,75;UBERON:0001017,2.43e-18,73;UBERON:0010314,3.40e-15,92;UBERON:0000073,1.25e-14,54;UBERON:0004121,1.34e-14,95;UBERON:0000924,1.34e-14,95;UBERON:0006601,1.34e-14,95;UBERON:0001049,8.86e-14,52;UBERON:0005068,8.86e-14,52;UBERON:0006241,8.86e-14,52;UBERON:0007135,8.86e-14,52;UBERON:0002020,4.40e-13,34;UBERON:0002346,2.49e-12,64;UBERON:0003075,2.49e-12,64;UBERON:0007284,2.49e-12,64;UBERON:0000955,7.61e-11,47;UBERON:0006238,7.61e-11,47;UBERON:0002616,1.92e-10,46;UBERON:0000025,2.24e-10,114;UBERON:0003528,4.43e-10,29;UBERON:0002791,4.43e-10,29;UBERON:0001893,4.43e-10,29;UBERON:0010371,7.63e-10,73;UBERON:0004111,1.86e-09,122;UBERON:0003080,4.83e-09,40;UBERON:0002780,1.22e-08,39;UBERON:0001890,1.22e-08,39;UBERON:0006240,1.22e-08,39;UBERON:0003056,5.33e-08,49;UBERON:0000922,1.15e-07,320;UBERON:0000479,2.10e-07,349
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3,19.2615187056947,1.12738587736838,35.584937958467,31.6025716773056,51.9184672878607,47.9182945102382,52.8832672786136,73.2309169149505,41.665403150064,12.5831213310853,7.48910774560619,8.64090018773596,34.4452121484714,33.2469353075869,26.9102707771847,13.7716072356463,17.7236428710807,16.2918710920637,13.4618903462365,15.5074003533306,14.8420681423777,18.213426790545,17.6445823989471,27.9704117723089,21.7438762107145,23.0247497297691,58.4964389727245,8.43546622821446,6.6388253891012,8.562115434568,94.6629010757733,106.040598629918,47.2531190609544,20.5793643915903,25.5801773058035,151.353493821374,151.447002810861,165.566803383986,171.337622796657,76.7292422143119,90.6472676867641,91.1280375312938,108.527409977037,95.6130482956672,108.21190515613,17.3324870465575,71.8244772121856,52.4152169665192,79.0096830471956,50.7263853559717,63.7936974321549,67.563005251691,68.6096740605518,81.1925600267293,79.5996217055962,71.2276832691574,82.0524585029432,80.2507719016892,87.7144587946709,93.2752015839159,86.6854518135194,88.6515093478145,85.651693885885,81.1809224582514,70.8026805846451,68.2309812246977,58.9219676449,75.5842722133007,74.9987509822815,74.7228480497725,78.6915853392591,80.3053800911472,69.9765432424662,73.3342214767654,65.6536457839554,86.8408332668955,82.7437651954733,74.8892809000532,83.8208310816076,83.3356559438531,157.380664100906,90.7654640768185,81.4361294843051,80.5323878009831,97.7219986699454,92.5152664125482
|phase1_expression=54.7709057098395,0,0,0.60492842261366,0,0.503637815735669,0.934450562382103,4.13194635013044,3.09735188733667,2.57470978954193,1.19852577757853,0.638177271962691,3.0816131387617,2.53519167015092,65.6226230776856,37.0529739323381,23.785103856357,18.9277299214943,21.6640805097067,24.1902101524877,54.2576191163825,5.46100231604869,4.4403964153619,2.07990149631429,1.14704640533585,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,1.67412652294763,2.3440060335714,3.66466620781659,0.588231488031014,2.04913645487534,3.39857247121808,30.3411331321141,26.4593790482933,30.2852141066775,90.7573959443725,34.665999864491,27.9001452072779,12.4435135407541,36.1164967793435,66.1261796078869,2.68452169692378,2.17608642603403,2.35265659399725,147.666916284634,115.759509735258,128.402350977083,222.750423406417,221.11822933571,200.290723507953,43.3721001048489,16.0073063300005,725.769121987448,1008.64368981831,888.100143682625,490.445380918629,416.108424663244,99.4383382038301,106.924703158699,105.793455559745,361.919797239619,297.289056120872,96.2777681829539,82.4271050756833,100.194847740492,135.442533629248,153.607867716481,145.618993526919,337.233237726106,332.832047425566,277.646826506753,154.109015448762,122.119486376875,137.060028255799,343.242302076823,319.197308351589,210.63137378259,131.915028786407,202.909638886719,58.8424912064406,86.90281157512,1.3599426674155,7.01614149129162,16.8941868536394,9.85659151614138,43.9591035012383,59.6506129023202,42.3451187502676,56.8876714961648,62.6753218006228,214.305217281911,193.651982177051,255.984013135199,14.5048997477513,18.2419103142071,11.1215377903252,38.2515997058851,271.107964178589,251.906309993008,95.2434443946086,193.944509684834,236.842115681972,222.768062736776,201.076689202055,261.512176557055,34.360100515078,62.7561209032417,118.537813961283,116.14859826224,91.8700716795237,94.0657991082331,13.0474232852686,117.697880398642,91.5282108774799,9.45191104271788,1.07833612055328,1.19980546198682,0.254140454146129,138.706132088866,107.970142265196,289.884590324378,134.887672469207,114.304809426658,152.100848617598,110.648541412211,106.931332042832,104.875076224308,30.8321765289083,43.7719060243866,34.2216764991911,29.4274693674845,58.7002543165438,46.1156742577288,72.7310175927695,63.2881778207158,60.9061209638237,60.0191820114516,49.149502388688,62.0267942950447,66.5095249339727,72.7729831659548,66.1752453156923,82.8840156322756,67.9081050146213,28.8599686886815,0,0,0.284163499395593,38.1111421465323,44.5599513964083,43.0348326891826,52.0838418287463,43.4848952161762,44.5831956244523,39.2982366628189,46.9478452449334,48.224086397641,49.2033951241307,57.1302774995251,68.0978000185188,57.1641950833049,64.5477338955689,56.0982830418354,96.9436662880627,260.451573931969,1.65209391491899,10.5780226665418,46.2835503661458,42.4993109504602,47.4232257665303,31.8659968904881,33.3567065767305,38.2353508486244,17.5575752771469,29.3164139408739,25.6361912976275,32.4299049427076,27.4899362837959,20.6728463990471,19.0201483889731,13.9398891278057,39.450923398241,40.6724704890635,42.8289395557706,26.0673699642002,31.614255408323,47.6222217055263,39.3963626284123,36.6073166989413,28.887765922813,21.2243121945497,68.1841042300442,20.8556382145118,28.8941722816408,37.7768348806554,54.3665125321188,46.0648375127116,36.9207485083059,59.8407965897686,60.8007100406383,53.5394755716759,63.258010872036,146.62353338139,100.476130742889,86.1293973799651,72.4765550628525,68.0245365122348,85.7254802373046,29.7501516479661,39.9264192282963,30.0448801822083,30.0403517809283,32.6637202011541,53.7978628402391,51.3201493866011,72.669801432954,84.1565820665345,92.962130127315,73.2469016779349,79.7804616220438,75.9407557552936,443.32637478146,587.962044208025,24.0964493779328,27.5936746304732,160.71114057778,146.631819926846,21.3115428989678,44.687354115174,60.8930863473375,60.1275666216823,50.8399218649405,55.6797299229446,53.0260844316098,58.5968418732883,88.248732965127,87.9690132313049,85.7774478143956,134.312310264315,47.2660483743535,56.9809931735217,65.6434446194912,56.7497223025522,10.619611067197,23.7925023431882,24.1858845571801,18.6719028958339,41.637566896189,39.0442637888788,31.2698234733548,30.900367005588,28.8762876491624,26.5470876666085,16.8669773719998,22.6898195146011,23.4903327970114,39.6134406868882,41.0067027591332,41.3670477610973,43.9803779432838,56.8996528150605,42.6181963359493,77.9430269733374,26.5179030111993,28.3854974957519,16.7601582521771,47.3223545942048,33.2616718993565,34.0164896594799,20.6514155125426,21.502457866603,18.3632927076806,209.716016573886,126.615322671209,44.9923372159825,68.5219751267933,52.5547995043088,68.7571965436757,94.2566073610873,4.9293744698218,3.91864066506242,3.73139929271944,41.0508365746499,43.179863123825,53.2697003872344,45.9022698492655,48.9266612673857,46.5112260779358,51.3833159726167,76.8677138245624,28.0078857922912,24.2380000055653,19.2615187056947,1.12738587736838,35.584937958467,31.6025716773056,51.9184672878607,47.9182945102382,52.8832672786136,73.2309169149505,41.665403150064,12.5831213310853,7.48910774560619,8.64090018773596,34.4452121484714,33.2469353075869,26.9102707771847,13.7716072356463,17.7236428710807,16.2918710920637,13.4618903462365,15.5074003533306,14.8420681423777,18.213426790545,17.6445823989471,27.9704117723089,21.7438762107145,23.0247497297691,58.4964389727245,8.43546622821446,6.6388253891012,8.562115434568,94.6629010757733,106.040598629918,47.2531190609544,20.5793643915903,25.5801773058035,151.353493821374,151.447002810861,165.566803383986,171.337622796657,76.7292422143119,90.6472676867641,91.1280375312938,108.527409977037,95.6130482956672,108.21190515613,17.3324870465575,71.8244772121856,52.4152169665192,79.0096830471956,50.7263853559717,63.7936974321549,67.563005251691,68.6096740605518,81.1925600267293,79.5996217055962,71.2276832691574,82.0524585029432,80.2507719016892,87.7144587946709,93.2752015839159,86.6854518135194,88.6515093478145,85.651693885885,81.1809224582514,70.8026805846451,68.2309812246977,58.9219676449,75.5842722133007,74.9987509822815,74.7228480497725,78.6915853392591,80.3053800911472,69.9765432424662,73.3342214767654,65.6536457839554,86.8408332668955,82.7437651954733,74.8892809000532,83.8208310816076,83.3356559438531,157.380664100906,90.7654640768185,81.4361294843051,80.5323878009831,97.7219986699454,92.5152664125482
|short_description=p1@Sdc3
}}
}}

Latest revision as of 10:07, 26 September 2015

Short description:p1@Sdc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sdc3_5end
Coexpression cluster:MCL_coexpression_mm9:1801
Association with transcript: 0bp_to_ENSMUST00000070478, NM_011520, uc008uzr.1_5end
EntrezGene:Sdc3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Sdc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G754.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A165.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A354.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B790.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C234.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C436.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C466.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1147.67
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5128.40
Mouse Granule cells, donor1.CNhs12131.11713-123C3222.75
Mouse Granule cells, donor2.CNhs12357.11731-123E3221.12
Mouse Granule cells, donor3.CNhs12108.11636-122C7200.29
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7725.77
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71008.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2888.10
Mouse Microglia, donor1.CNhs12629.11718-123C8490.45
Mouse Microglia, donor2.CNhs12634.11736-123E8416.11
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D599.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5106.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9105.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1361.92
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5297.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D296.28
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F282.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6100.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3153.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7145.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4337.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4332.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8277.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4154.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5122.12
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6137.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6343.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6319.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1210.63
Mouse Schwann, donor1.CNhs12507.11728-123D9131.92
Mouse Schwann, donor2.CNhs12573.11746-123F9202.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G358.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F786.90
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I759.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E342.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I856.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G662.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1214.31
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8193.65
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6255.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.25
accessory axillary lymph node, adult.CNhs10475.1063-29H9271.11
adrenal gland, adult.CNhs10508.49-24D7251.91
adrenal gland, embryo E14.CNhs11038.406-44C595.24
adrenal gland, embryo E16.CNhs11004.1254-43D6193.94
adrenal gland, embryo E17.CNhs11043.1263-45I1236.84
adrenal gland, embryo E18.CNhs11026.1262-18F5222.77
adrenal gland, neonate N00.CNhs11191.1311-23C1201.08
adrenal gland, neonate N25.CNhs11223.1377-27I3261.51
amnion, adult pregnant day17.5.CNhs10488.583-22A834.36
aorta, adult.CNhs10498.46-23H162.76
bone (os femoris), adult.CNhs10483.56-12G2118.54
bone (os femoris), neonate N02.CNhs11227.1985-43F5116.15
bone (os femoris), neonate N16.CNhs11225.1525-43A691.87
bone (os femoris), neonate N20.CNhs11195.1350-25C394.07
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B2117.70
cerebellum, neonate N30.CNhs11135.1395-42I291.53
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A4138.71
corpus striatum, adult.CNhs10487.19-21D8107.97
corpus striatum, neonate N00.CNhs11226.630-43F1289.88
cortex, adult.CNhs10473.12-14D5134.89
cortex, neonate N30.CNhs11107.1392-42F2114.30
diencephalon, adult.CNhs10482.20-12F2152.10
diencephalon, neonate N30.CNhs11201.1388-42B2110.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1106.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2104.88
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G443.77
eyeball, embryo E12.CNhs11016.345-16C634.22
eyeball, embryo E14.CNhs10521.399-16E229.43
eyeball, embryo E15.CNhs10593.426-16C958.70
eyeball, embryo E17.CNhs11023.1261-18D446.12
eyeball, neonate N00.CNhs11207.633-15C672.73
eyeball, neonate N01.CNhs11140.1532-43E763.29
eyeball, neonate N02.CNhs11205.1551-44G860.91
eyeball, neonate N16.CNhs11188.777-19A260.02
forelimb, embryo E11.CNhs10596.335-25E249.15
forelimb, embryo E12.CNhs10600.359-14H262.03
forelimb, embryo E13.CNhs10589.384-1E266.51
forelimb, embryo E14.CNhs10577.413-26A872.77
forelimb, embryo E15.CNhs11007.437-20E766.18
forelimb, embryo E17.CNhs10598.1517-43C482.88
forelimb, embryo E18.CNhs11008.1520-43B567.91
gonad, embryo E13.CNhs11044.1564-45I628.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E938.11
heart, embryo E12.CNhs11015.353-12F544.56
heart, embryo E13.CNhs11013.376-3I943.03
heart, embryo E14.CNhs10597.403-26D452.08
heart, embryo E15.CNhs11017.431-16C843.48
heart, embryo E16.CNhs11021.457-17C644.58
heart, embryo E17.CNhs11025.479-18E539.30
heart, embryo E18.CNhs11030.1283-20G346.95
heart, neonate N00.CNhs11213.639-21E348.22
heart, neonate N03.CNhs11221.1349-25I249.20
heart, neonate N10.CNhs11118.749-24G157.13
heart, neonate N16.CNhs11209.782-15G168.10
heart, neonate N20.CNhs11127.821-26I657.16
heart, neonate N25.CNhs11196.1351-25D364.55
heart, neonate N30.CNhs11202.1390-42D256.10
hippocampus, adult.CNhs10478.13-16E896.94
hippocampus, neonate N00.CNhs11228.627-43G1260.45
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I546.28
intestine, embryo E13.CNhs11010.381-16D542.50
intestine, embryo E15.CNhs10602.976-16D847.42
intestine, embryo E16.CNhs10585.463-22H431.87
intestine, embryo E17.CNhs10582.482-18D333.36
intestine, embryo E18.CNhs10526.1289-20F738.24
intestine, neonate N00.CNhs11126.644-26D117.56
intestine, neonate N01.CNhs11192.1322-23E929.32
intestine, neonate N06.CNhs11102.688-20B825.64
intestine, neonate N07.CNhs11095.720-20F232.43
intestine, neonate N10.CNhs11098.755-23A527.49
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I939.45
kidney, embryo E15.CNhs10997.434-16F840.67
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I226.07
kidney, embryo E18.CNhs11001.1288-20C731.61
kidney, neonate N00.CNhs11214.646-21G747.62
kidney, neonate N10.CNhs11206.758-6D539.40
kidney, neonate N20.CNhs11113.832-19I136.61
kidney, neonate N25.CNhs11122.1353-25F328.89
kidney, neonate N30.CNhs11203.1385-42H121.22
liver, adult pregnant day01.CNhs10466.508-5B268.18
liver, embryo E12.CNhs10601.355-15F820.86
liver, embryo E13.CNhs10524.378-3H628.89
liver, embryo E14.CNhs10594.409-16E137.78
liver, embryo E15.CNhs10520.433-16D754.37
liver, embryo E16.CNhs10523.462-17F546.06
liver, embryo E17.CNhs10510.481-18A336.92
liver, embryo E18.CNhs10579.499-43G459.84
liver, neonate N00.CNhs11117.641-24F460.80
liver, neonate N03.CNhs11123.1345-25G253.54
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H2146.62
liver, neonate N10.CNhs11115.751-24B9100.48
liver, neonate N20.CNhs11220.823-25A386.13
liver, neonate N25.CNhs11198.1368-26H172.48
liver, neonate N30.CNhs11106.1382-42D168.02
lung, adult.CNhs10474.28-22B185.73
lung, embryo E12.CNhs10522.354-16G229.75
lung, embryo E14.CNhs10604.404-26F839.93
lung, embryo E15.CNhs11020.432-17C530.04
lung, embryo E16.CNhs10998.458-17B630.04
lung, embryo E17.CNhs10605.480-44A632.66
lung, embryo E18.CNhs10583.1287-20I653.80
lung, neonate N00.CNhs11224.640-42C651.32
lung, neonate N06.CNhs11212.683-20E572.67
lung, neonate N07.CNhs11111.715-19A384.16
lung, neonate N10.CNhs11219.750-23E692.96
lung, neonate N20.CNhs11109.822-18A473.25
lung, neonate N25.CNhs11119.1359-25C779.78
lung, neonate N30.CNhs11133.1394-42H275.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1443.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1587.96
mammary gland, adult lactating day02.CNhs10480.595-22B624.10
mammary gland, adult pregnant day19.CNhs10476.588-5H227.59
medulla oblongata, adult.CNhs10477.17-12C2160.71
medulla oblongata, neonate N30.CNhs11200.1396-42A3146.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E160.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E260.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E350.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D755.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D853.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D958.60
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D488.25
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D587.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D685.78
olfactory brain, adult.CNhs10489.18-22I9134.31
ovary, adult.CNhs10507.91-2I747.27
ovary, embryo E18.CNhs11040.505-44H756.98
ovary, neonate N00.CNhs11217.1299-22I465.64
oviduct, adult pregnant day01.CNhs10500.988-6G656.75
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F423.79
pancreas, embryo E15.CNhs11042.1556-45F224.19
pancreas, embryo E16.CNhs11003.460-26E518.67
pancreas, embryo E17.CNhs10599.1558-45G341.64
pancreas, embryo E18.CNhs10580.1535-43I739.04
pancreas, neonate N00.CNhs11105.645-26G931.27
pancreas, neonate N01.CNhs11138.1531-43D730.90
pancreas, neonate N02.CNhs11139.1539-43D828.88
pancreas, neonate N16.CNhs11136.787-43B626.55
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G823.49
pituitary gland, embryo E12.CNhs11018.346-16E639.61
pituitary gland, embryo E13.CNhs11009.370-44C741.01
pituitary gland, embryo E14.CNhs11037.398-44A541.37
pituitary gland, embryo E15.CNhs10592.427-16B943.98
pituitary gland, embryo E16.CNhs11036.449-43F656.90
pituitary gland, embryo E17.CNhs11039.1265-44F542.62
pituitary gland, neonate N00.CNhs11190.1308-22E977.94
placenta, adult pregnant day10.CNhs10472.539-13I726.52
placenta, adult pregnant day17.CNhs10464.577-18G328.39
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C347.32
skin, neonate N00.CNhs11124.650-25G433.26
skin, neonate N03.CNhs11215.662-22H334.02
skin, neonate N06.CNhs11097.693-20I520.65
skin, neonate N10.CNhs11108.762-6C421.50
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C9209.72
spleen, adult.CNhs10465.25-2G2126.62
spleen, embryo E16.CNhs11035.461-43C144.99
spleen, embryo E18.CNhs11011.1271-21F268.52
spleen, neonate N10.CNhs11116.752-24D152.55
spleen, neonate N20.CNhs11112.824-19H168.76
spleen, neonate N25.CNhs11099.1354-25G394.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H641.05
stomach, embryo E12.CNhs10588.356-43E343.18
stomach, embryo E15.CNhs10603.1252-16G853.27
stomach, embryo E16.CNhs11022.459-17D445.90
stomach, embryo E17.CNhs11006.1035-18D548.93
stomach, embryo E18.CNhs10999.1286-20C646.51
stomach, neonate N03.CNhs11193.1340-24B851.38
stomach, neonate N07.CNhs11210.718-18A976.87
stomach, neonate N25.CNhs11104.1355-25E428.01
stomach, neonate N30.CNhs11134.1386-42I124.24
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F535.58
testis, embryo E15.CNhs11034.443-27C531.60
testis, embryo E16.CNhs11033.470-26G551.92
testis, embryo E17.CNhs11029.486-18I547.92
testis, embryo E18.CNhs11027.503-18G552.88
testis, neonate N00.CNhs11189.1300-22B773.23
testis, neonate N07.CNhs11222.726-26I441.67
testis, neonate N10.CNhs11204.763-44D912.58
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B534.45
thymus, embryo E14.CNhs11041.402-44I433.25
thymus, embryo E15.CNhs11005.430-45I226.91
thymus, embryo E16.CNhs11002.456-26C513.77
thymus, embryo E17.CNhs10581.478-18C117.72
thymus, embryo E18.CNhs10595.1273-19G416.29
thymus, neonate N02.CNhs11181.1541-43F813.46
thymus, neonate N03.CNhs11137.2104-43C715.51
thymus, neonate N06.CNhs11197.681-26C414.84
thymus, neonate N07.CNhs11211.713-19D318.21
thymus, neonate N10.CNhs11194.748-24E417.64
thymus, neonate N20.CNhs11186.820-7A227.97
thymus, neonate N25.CNhs11125.1362-25G721.74
thymus, neonate N30.CNhs11132.1393-42G223.02
tongue, adult.CNhs10499.32-1B458.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E494.66
uterus, adult pregnant day19.CNhs10497.590-15F5106.04
uterus, adult.CNhs10509.92-27E547.25
vagina, adult.CNhs10502.89-27D520.58
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1151.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2151.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3165.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7171.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A590.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A691.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7108.53
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A895.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9108.21
whole body, embryo E11.CNhs11014.324-5I817.33
whole body, embryo E12.CNhs10587.857-27C971.82
whole body, embryo E13.CNhs10512.372-23H252.42
whole body, embryo E14.5.CNhs10578.420-27D279.01
whole body, embryo E14.CNhs10519.395-14B150.73
whole body, embryo E16.CNhs10514.453-14F263.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G567.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G568.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G581.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G579.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G571.23
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G582.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G580.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G587.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G593.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G586.69
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G588.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G585.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G581.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G570.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G568.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G558.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G575.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G575.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G574.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G578.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G580.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G569.98
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G573.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G565.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G586.84
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G582.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G574.89
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G583.82
whole body, embryo E17.5.CNhs10513.490-9F983.34
whole body, embryo E17.CNhs10517.475-3I5157.38
whole body, embryo E18.CNhs10516.493-3B390.77
whole body, neonate N00.CNhs10525.657-19C281.44
whole body, neonate N01.CNhs10576.659-23C680.53
whole body, neonate N06.CNhs10515.692-21D197.72
whole body, neonate N10.CNhs10518.761-6B492.52





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.69e-1223
neuroblast (sensu Vertebrata)3.69e-1223
neural cell2.55e-1143
ectodermal cell2.73e-1144
neurectodermal cell2.73e-1144
neuron3.25e-1133
neuronal stem cell3.25e-1133
neuroblast3.25e-1133
electrically signaling cell3.25e-1133
electrically responsive cell9.07e-1139
electrically active cell9.07e-1139

Uber anatomy
Ontology termp-valuen
nervous system2.27e-1975
central nervous system2.43e-1873
structure with developmental contribution from neural crest3.40e-1592
regional part of nervous system1.25e-1454
ectoderm-derived structure1.34e-1495
ectoderm1.34e-1495
presumptive ectoderm1.34e-1495
neural tube8.86e-1452
neural rod8.86e-1452
future spinal cord8.86e-1452
neural keel8.86e-1452
gray matter4.40e-1334
neurectoderm2.49e-1264
neural plate2.49e-1264
presumptive neural plate2.49e-1264
brain7.61e-1147
future brain7.61e-1147
regional part of brain1.92e-1046
tube2.24e-10114
brain grey matter4.43e-1029
regional part of telencephalon4.43e-1029
telencephalon4.43e-1029
ecto-epithelium7.63e-1073
anatomical conduit1.86e-09122
anterior neural tube4.83e-0940
regional part of forebrain1.22e-0839
forebrain1.22e-0839
future forebrain1.22e-0839
pre-chordal neural plate5.33e-0849
embryo1.15e-07320
tissue2.10e-07349
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