FFCP PHASE1:Mm9::chr7:26101992..26102011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269878 | |EntrezGene=269878 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P60882 | |UniProt=P60882 | ||
|association_with_transcript=-171bp_to_ENSMUST00000128119,NM_001160400,uc009fsj.2_5end | |association_with_transcript=-171bp_to_ENSMUST00000128119,NM_001160400,uc009fsj.2_5end | ||
|cluster_id=chr7:26101992..26102011,+ | |||
|description=CAGE_peak_4_at_Megf8_5end | |description=CAGE_peak_4_at_Megf8_5end | ||
|id=chr7:26101992..26102011,+ | |id=chr7:26101992..26102011,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.49e-13!50;CL:0000221!9.67e-13!44;CL:0000133!9.67e-13!44;CL:0002319!1.52e-12!43;CL:0000393!4.30e-10!39;CL:0000211!4.30e-10!39;CL:0000540!2.54e-08!33;CL:0000047!2.54e-08!33;CL:0000031!2.54e-08!33;CL:0000404!2.54e-08!33;CL:0000117!9.96e-07!23;CL:0000337!9.96e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.68e-13,44;CL:0000133,3.68e-13,44;CL:0002319,6.49e-13,43;CL:0000393,3.33e-10,39;CL:0000211,3.33e-10,39;CL:0000540,4.30e-08,33;CL:0000047,4.30e-08,33;CL:0000031,4.30e-08,33;CL:0000404,4.30e-08,33;CL:0002321,9.04e-08,70;CL:0002453,2.16e-07,8;CL:0000117,2.71e-07,23;CL:0000337,2.71e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.15e-22!102;UBERON:0000924!7.15e-22!102;UBERON:0006601!7.15e-22!102;UBERON:0001017!1.13e-19!73;UBERON:0005743!1.13e-19!73;UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0002346!5.48e-19!71;UBERON:0003075!5.48e-19!71;UBERON:0007284!5.48e-19!71;UBERON:0000033!1.83e-15!63;UBERON:0001049!1.76e-13!52;UBERON:0005068!1.76e-13!52;UBERON:0006241!1.76e-13!52;UBERON:0007135!1.76e-13!52;UBERON:0000955!5.60e-13!50;UBERON:0006238!5.60e-13!50;UBERON:0002616!1.96e-12!49;UBERON:0003056!5.44e-11!49;UBERON:0000025!6.21e-09!114;UBERON:0004111!2.02e-08!122;UBERON:0003080!4.72e-08!40;UBERON:0002780!1.43e-07!39;UBERON:0001890!1.43e-07!39;UBERON:0006240!1.43e-07!39;UBERON:0003076!3.95e-07!12;UBERON:0003057!3.95e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-19,73;UBERON:0001016,3.89e-19,75;UBERON:0004121,5.56e-19,95;UBERON:0000924,5.56e-19,95;UBERON:0006601,5.56e-19,95;UBERON:0010314,3.50e-18,92;UBERON:0002346,8.88e-18,64;UBERON:0003075,8.88e-18,64;UBERON:0007284,8.88e-18,64;UBERON:0010371,2.06e-15,73;UBERON:0000073,2.52e-15,54;UBERON:0001049,7.97e-14,52;UBERON:0005068,7.97e-14,52;UBERON:0006241,7.97e-14,52;UBERON:0007135,7.97e-14,52;UBERON:0000955,1.36e-11,47;UBERON:0006238,1.36e-11,47;UBERON:0002616,5.55e-11,46;UBERON:0003056,6.67e-11,49;UBERON:0000025,9.89e-09,114;UBERON:0004111,1.44e-08,122;UBERON:0003076,1.63e-08,12;UBERON:0003057,1.63e-08,12;UBERON:0003080,1.53e-07,40;UBERON:0002780,5.28e-07,39;UBERON:0001890,5.28e-07,39;UBERON:0006240,5.28e-07,39 | |||
|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,2.26614272356039,1.72340783073175,1.65192076945513,8.60630478782843,3.48840250208714,6.59058548203415,5.05517737593137,3.21968769738334,1.43752564364972,0,0,0,1.28629718017973,2.0057340795713,1.54701627683233,2.63011399117477,0.528990979272033,0.633831403506179,1.69422266034566,2.66788438833342,0.449949858640699,1.97773272513395,0,4.19440154725767,5.37905627450176,1.24427534770173,0.945041568321835,1.47227472945967,3.42781181284564,3.53389665522582,1.34739879136449,1.53352753629178,0,5.50579404996943,1.65993539510744,2.30409799884365,2.37395317914349,2.19570344645783,2.08365348222704,1.3959149950069,3.37657566019008,2.44477196442896,2.06240009831567,3.13217697758026,1.3047961207771,0.454357159999104,1.5870027622425,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,1.36344258062446,1.29893002301434,1.06001872353102,1.40843419776681,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.11418387971906,0.258937883647172,3.41416919849097,1.21439728736295,0.913396434936424,1.84492397804847,0.904335843315735,1.76383060703557,2.13633205260448,0.741584903203122,0.578397427679647,0,1.29413479957927,0.441683036920787,0,0,3.80615036115011,3.35114730901528,0.255457055208591,0.11981512450592,0,0,3.14560342750128,1.83000241127451,1.25654352112864,1.04294592115366,0.767146371990992,2.49345653471472,3.73154905055843,1.62942982160506,0.497627882440372,1.0108910337347,1.47309299120532,2.08192708740326,2.5289231487682,0.360124259610698,1.80845781402858,3.12967896096108,2.8185018462667,4.49768277886698,2.06962696591213,1.29340795759705,1.13463648100692,0.879755620819744,1.09597866213787,0.278047249225598,2.43776516565517,0.411564272815887,0.995171334092466,0,0,0,1.65700618028402,1.17263029990548,1.08037236876609,1.18372367792605,0.393528463494808,0.154267112887378,0.465067889500816,1.3413670069981,1.05088808130453,0.658239399653922,0.492502392237286,0.972825714550269,1.31579988682799,1.09775057645525,0.805238512562231,0.630869845692382,1.23485534855141,0,0.264450566663544,1.06644125267617,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,1.70701110857774,0.799739588268102,2.25415471346161,1.01825663922657,1.35766741017338,0.841629838683823,0.948548056863859,0.885660887877613,0.784993639206874,0.987177311374404,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0,0.757736633841335,0.179397413521912,0,0.739012760666419,2.08440552947533,1.14075483509418,1.18821560042632,0.938760993154008,1.00503754465089,1.42826184531608,0.780534591431195,1.10344600874334,2.43611158613652,1.59454768657487,0.655453258862952,1.89953480052485,2.4590339958857,0,0,0.491764273019036,0.275936746304732,2.0871576698413,2.22702204525186,0.983609672260053,0.504941854408746,1.57754109708128,0.780877488593277,1.50796378412959,1.43381278771531,1.11399337041197,2.54768877709949,2.83367491172426,0.876767573733936,0.790575555893047,2.89189184779626,1.98716119291576,1.24645922567079,1.62886959353576,2.47455184458803,0,1.21390318077491,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0,0.948110273807448,1.05418608574999,0,3.74483566329167,0.720244376125241,2.71653235943784,1.71469628025274,1.41872186913819,3.21063871683727,1.81003922662333,2.13125464380219,0.23467170806371,0.42366414172764,0.441056796109924,0.49465875882444,0.484393280087717,0.301564624640779,0.477489376012546,1.14898629821543,0.582961673259701,1.29797711407357,0,1.857481811669,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0,1.89801596148681,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.648074866458964,0,2.25477175473676,1.79419855252775,1.15820943319968,2.33341426012857,1.80823752868824,1.520605129417,1.40828686374905,2.3436789271911,1.67774951081137,1.44950472495604,0.576060012515731,0.316011120628178,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.381034033274999,0.201652370273681,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.335769232728157,1.15913756419314,1.50145980360946,0.549454872801795,1.07184189539533,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,2.26571204492102,1.03552062350364,0.93408612825759,1.59609949360412,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.25269721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| |phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,2.26614272356039,1.72340783073175,1.65192076945513,8.60630478782843,3.48840250208714,6.59058548203415,5.05517737593137,3.21968769738334,1.43752564364972,0,0,0,1.28629718017973,2.0057340795713,1.54701627683233,2.63011399117477,0.528990979272033,0.633831403506179,1.69422266034566,2.66788438833342,0.449949858640699,1.97773272513395,0,4.19440154725767,5.37905627450176,1.24427534770173,0.945041568321835,1.47227472945967,3.42781181284564,3.53389665522582,1.34739879136449,1.53352753629178,0,5.50579404996943,1.65993539510744,2.30409799884365,2.37395317914349,2.19570344645783,2.08365348222704,1.3959149950069,3.37657566019008,2.44477196442896,2.06240009831567,3.13217697758026,1.3047961207771,0.454357159999104,1.5870027622425,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,1.36344258062446,1.29893002301434,1.06001872353102,1.40843419776681,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.11418387971906,0.258937883647172,3.41416919849097,1.21439728736295,0.913396434936424,1.84492397804847,0.904335843315735,1.76383060703557,2.13633205260448,0.741584903203122,0.578397427679647,0,1.29413479957927,0.441683036920787,0,0,3.80615036115011,3.35114730901528,0.255457055208591,0.11981512450592,0,0,3.14560342750128,1.83000241127451,1.25654352112864,1.04294592115366,0.767146371990992,2.49345653471472,3.73154905055843,1.62942982160506,0.497627882440372,1.0108910337347,1.47309299120532,2.08192708740326,2.5289231487682,0.360124259610698,1.80845781402858,3.12967896096108,2.8185018462667,4.49768277886698,2.06962696591213,1.29340795759705,1.13463648100692,0.879755620819744,1.09597866213787,0.278047249225598,2.43776516565517,0.411564272815887,0.995171334092466,0,0,0,1.65700618028402,1.17263029990548,1.08037236876609,1.18372367792605,0.393528463494808,0.154267112887378,0.465067889500816,1.3413670069981,1.05088808130453,0.658239399653922,0.492502392237286,0.972825714550269,1.31579988682799,1.09775057645525,0.805238512562231,0.630869845692382,1.23485534855141,0,0.264450566663544,1.06644125267617,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,1.70701110857774,0.799739588268102,2.25415471346161,1.01825663922657,1.35766741017338,0.841629838683823,0.948548056863859,0.885660887877613,0.784993639206874,0.987177311374404,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0,0.757736633841335,0.179397413521912,0,0.739012760666419,2.08440552947533,1.14075483509418,1.18821560042632,0.938760993154008,1.00503754465089,1.42826184531608,0.780534591431195,1.10344600874334,2.43611158613652,1.59454768657487,0.655453258862952,1.89953480052485,2.4590339958857,0,0,0.491764273019036,0.275936746304732,2.0871576698413,2.22702204525186,0.983609672260053,0.504941854408746,1.57754109708128,0.780877488593277,1.50796378412959,1.43381278771531,1.11399337041197,2.54768877709949,2.83367491172426,0.876767573733936,0.790575555893047,2.89189184779626,1.98716119291576,1.24645922567079,1.62886959353576,2.47455184458803,0,1.21390318077491,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0,0.948110273807448,1.05418608574999,0,3.74483566329167,0.720244376125241,2.71653235943784,1.71469628025274,1.41872186913819,3.21063871683727,1.81003922662333,2.13125464380219,0.23467170806371,0.42366414172764,0.441056796109924,0.49465875882444,0.484393280087717,0.301564624640779,0.477489376012546,1.14898629821543,0.582961673259701,1.29797711407357,0,1.857481811669,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0,1.89801596148681,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.648074866458964,0,2.25477175473676,1.79419855252775,1.15820943319968,2.33341426012857,1.80823752868824,1.520605129417,1.40828686374905,2.3436789271911,1.67774951081137,1.44950472495604,0.576060012515731,0.316011120628178,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.381034033274999,0.201652370273681,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.335769232728157,1.15913756419314,1.50145980360946,0.549454872801795,1.07184189539533,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,2.26571204492102,1.03552062350364,0.93408612825759,1.59609949360412,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.25269721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| ||
|short_description=p4@Megf8 | |short_description=p4@Megf8 | ||
}} | }} |
Latest revision as of 10:34, 26 September 2015
Short description: | p4@Megf8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Megf8_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_ENSMUST00000128119, NM_001160400, uc009fsj.2_5end |
EntrezGene: | Megf8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.68e-13 | 44 |
neurectodermal cell | 3.68e-13 | 44 |
neural cell | 6.49e-13 | 43 |
electrically responsive cell | 3.33e-10 | 39 |
electrically active cell | 3.33e-10 | 39 |
neuron | 4.30e-08 | 33 |
neuronal stem cell | 4.30e-08 | 33 |
neuroblast | 4.30e-08 | 33 |
electrically signaling cell | 4.30e-08 | 33 |
embryonic cell | 9.04e-08 | 70 |
oligodendrocyte precursor cell | 2.16e-07 | 8 |
CNS neuron (sensu Vertebrata) | 2.71e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.41e-19 | 73 |
nervous system | 3.89e-19 | 75 |
ectoderm-derived structure | 5.56e-19 | 95 |
ectoderm | 5.56e-19 | 95 |
presumptive ectoderm | 5.56e-19 | 95 |
structure with developmental contribution from neural crest | 3.50e-18 | 92 |
neurectoderm | 8.88e-18 | 64 |
neural plate | 8.88e-18 | 64 |
presumptive neural plate | 8.88e-18 | 64 |
ecto-epithelium | 2.06e-15 | 73 |
regional part of nervous system | 2.52e-15 | 54 |
neural tube | 7.97e-14 | 52 |
neural rod | 7.97e-14 | 52 |
future spinal cord | 7.97e-14 | 52 |
neural keel | 7.97e-14 | 52 |
brain | 1.36e-11 | 47 |
future brain | 1.36e-11 | 47 |
regional part of brain | 5.55e-11 | 46 |
pre-chordal neural plate | 6.67e-11 | 49 |
tube | 9.89e-09 | 114 |
anatomical conduit | 1.44e-08 | 122 |
posterior neural tube | 1.63e-08 | 12 |
chordal neural plate | 1.63e-08 | 12 |
anterior neural tube | 1.53e-07 | 40 |
regional part of forebrain | 5.28e-07 | 39 |
forebrain | 5.28e-07 | 39 |
future forebrain | 5.28e-07 | 39 |