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FFCP PHASE1:Mm9::chr10:80500045..80500084,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=106947
|EntrezGene=106947
|HGNC=
|HGNC=
|MCL_coexpression_id=866
|TSSclassifier=NA
|UniProt=Q99K24
|UniProt=Q99K24
|association_with_transcript=0bp_to_ENSMUST00000059551_5end
|association_with_transcript=0bp_to_ENSMUST00000059551_5end
|cluster_id=chr10:80500045..80500084,-
|description=CAGE_peak_1_at_Slc39a3_5end
|description=CAGE_peak_1_at_Slc39a3_5end
|id=chr10:80500045..80500084,-
|id=chr10:80500045..80500084,-
|ontology_enrichment_celltype=CL:0002321!3.69e-09!70;CL:0000220!3.69e-09!70;CL:0000055!6.44e-07!50
|ontology_enrichment_celltype=CL:0002321!3.69e-09!70;CL:0000220!3.69e-09!70;CL:0000055!6.44e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002321,3.69e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.26e-13!75;UBERON:0001016!1.26e-13!75;UBERON:0000955!1.36e-13!50;UBERON:0006238!1.36e-13!50;UBERON:0001049!2.00e-13!52;UBERON:0005068!2.00e-13!52;UBERON:0006241!2.00e-13!52;UBERON:0007135!2.00e-13!52;UBERON:0002616!3.51e-13!49;UBERON:0001017!3.65e-13!73;UBERON:0005743!3.65e-13!73;UBERON:0004121!2.98e-12!102;UBERON:0000924!2.98e-12!102;UBERON:0006601!2.98e-12!102;UBERON:0002020!2.81e-11!34;UBERON:0002346!2.01e-10!71;UBERON:0003075!2.01e-10!71;UBERON:0007284!2.01e-10!71;UBERON:0000033!2.41e-10!63;UBERON:0002791!6.01e-10!29;UBERON:0003528!6.01e-10!29;UBERON:0001893!6.01e-10!29;UBERON:0003080!2.41e-09!40;UBERON:0002780!6.26e-09!39;UBERON:0001890!6.26e-09!39;UBERON:0006240!6.26e-09!39;UBERON:0000956!3.55e-08!21;UBERON:0001869!3.55e-08!21;UBERON:0000203!3.55e-08!21;UBERON:0002619!1.18e-07!17;UBERON:0007023!2.67e-07!51;UBERON:0003056!4.35e-07!49;UBERON:0002021!5.02e-07!10;UBERON:0000411!5.02e-07!10;UBERON:0001950!5.02e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-14,54;UBERON:0001016,1.25e-13,75;UBERON:0001049,2.00e-13,52;UBERON:0005068,2.00e-13,52;UBERON:0006241,2.00e-13,52;UBERON:0007135,2.00e-13,52;UBERON:0001017,3.65e-13,73;UBERON:0000955,5.05e-12,47;UBERON:0006238,5.05e-12,47;UBERON:0002616,1.26e-11,46;UBERON:0004121,1.55e-11,95;UBERON:0000924,1.55e-11,95;UBERON:0006601,1.55e-11,95;UBERON:0002020,2.81e-11,34;UBERON:0003528,6.01e-10,29;UBERON:0002791,6.01e-10,29;UBERON:0001893,6.01e-10,29;UBERON:0002346,7.34e-10,64;UBERON:0003075,7.34e-10,64;UBERON:0007284,7.34e-10,64;UBERON:0003080,2.41e-09,40;UBERON:0002780,6.26e-09,39;UBERON:0001890,6.26e-09,39;UBERON:0006240,6.26e-09,39;UBERON:0010371,9.02e-09,73;UBERON:0000956,3.55e-08,21;UBERON:0001869,3.55e-08,21;UBERON:0000203,3.55e-08,21;UBERON:0002619,1.17e-07,17;UBERON:0007023,2.67e-07,51;UBERON:0011216,3.38e-07,194;UBERON:0003056,4.35e-07,49;UBERON:0002021,5.02e-07,10;UBERON:0000411,5.02e-07,10;UBERON:0001950,5.02e-07,10
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40828328,3.78018692876304,3.55450103224597,5.02233896616208,4.18079473792944,4.95920734352016,7.85267825952089,5.18459893167171,4.97071450469541,11.2738587736838,2.0932316446157,2.48187735685646,1.55560950675238,4.39143399824286,2.87225413334323,3.87278887530988,4.29674469985035,3.04092098834561,4.59009829569411,6.04863013141517,4.10814456816632,3.24360344464263,3.18403967210964,3.37794139742267,3.04345382634718,1.58945083825012,3.4856680360791,4.57837534241189,2.82706059854813,4.03896075271499,2.31900225814733,3.50848370663109,3.65604998233252,3.3894301632655,6.80191150845634,2.44184548711471,0.897138566094757,1.34307693091263,7.92077335531981,7.3196165425961,5.31139710375069,5.78794623513478,5.01572104035363,11.8597886949584,14.2700823317225,8.02053718815155,17.3571714167124,13.7016503954128,13.5970901530146,14.1754725048679,16.2115633160719,9.9691329976525,12.4262474820437,0.726511433089237,1.19707462020309,3.41467211508268,3.8897074730927,2.72497111416377,0.919217542250071,1.77797382241292,4.12070114477788,3.85103051510178,3.79045817645696,4.05566879824384,3.2066478035633,3.09016974650612,3.00918216302886,4.02048282689293,3.81034953026459,4.51948871184936,4.43691207066522,3.70877310722976,3.82717192349433,2.05721551431249,3.54951612318675,4.5302876089991,3.19762116591123,4.04670335785922,3.72304274723377,5.12198324043763,3.6829759601298,4.48153575691344,5.05028044491965,3.55905054372522,3.25064791839359,4.09231043169689,3.71848418846318,4.05103883060397,6.74488560432454,4.91256377735358,3.65280791882107,3.06061331310149,6.17655973534643,5.10109238364927
|phase1_expression=3.20297694209588,6.97950815278722,10.0099832665698,10.2837831844322,8.01433167914156,5.70789524500425,4.43864017131499,4.51931632045517,0.563154888606667,0.936258105287974,4.62288514208863,5.66382328866889,3.76641605848653,5.68232615723483,2.99798785634096,2.63217847606774,2.79824751251259,3.62781490161973,2.19383093769182,4.2438965179803,7.39876624314307,0.695036658406197,1.82839852397255,4.15980299262857,8.02932483735095,6.89078356938024,6.8921919385452,5.17130958446134,12.9215925230334,8.31699428207772,6.87364583031445,2.54012269383853,4.92051830067656,0,6.35473563452804,5.65197794218874,5.10423390655923,7.95210098400125,3.906676722619,6.28228492768558,6.47054636834116,6.14740936462601,9.71020706062307,4.90997590104751,6.2853697356099,7.89251034295231,12.5182615095686,10.4652075062614,5.93152693383074,8.55491555926847,8.53917171914711,11.5002051491977,1.34226084846189,5.07753499407941,3.02484419228218,7.97504251711436,10.8882707176728,9.7977697532714,7.08107613008592,5.81890077199236,8.87363964908651,7.11573517345177,9.78224275722253,16.1981949110652,21.7550599764734,22.7353636782752,12.583204641773,14.6002956022191,6.42875596312561,6.34527910158946,5.04779907243317,11.7116903605559,8.83474163806454,5.02212276781312,6.3258010872036,11.9498442259303,14.3150645299205,11.3641730895817,10.5988507946808,5.01167893374737,4.29991924931325,4.68822033501084,12.0048689570594,17.4456409109821,10.6958773443767,7.66034322231536,6.83384067835694,5.59198337475902,8.32988126665025,5.81901012822248,3.76823835312181,6.88339101585109,5.439770669662,9.71465744948071,7.79731700937203,2.24013443548668,6.31999890592883,13.6344258062446,10.9110121933205,14.8402621294343,4.08445917352373,23.0987659345772,7.64415719119937,21.3320010945999,4.32982082022428,5.06719730950197,7.07734223020697,4.11061966988616,1.8125651855302,8.90652834388949,3.99016251562112,3.95805121805784,5.76538743140146,6.63179618431539,4.70354828542819,13.4463252722753,8.89901883843746,4.33798070759735,3.5384422077995,2.91180329905337,5.30019644304944,3.87900202508178,7.45567044872489,7.61230072230023,10.2628886338593,7.40825460104915,0.718890747035522,2.39961092397363,0.762421362438388,10.0359728401231,12.3525162761029,8.79580464790051,12.5153510538439,10.9957646652042,11.6361304953354,11.5191296778108,2.64782346010822,3.23458123586242,6.82351447770922,9.25944165900485,2.08192708740326,5.28774840196988,1.44049703844279,3.91832526372859,3.12967896096108,2.3060469651273,3.93547243150861,10.0894314588216,1.5089759505299,1.89106080167819,2.63926686245923,6.57587197282724,2.22437799380478,4.87553033131033,4.11564272815887,2.7864797354589,2.1066395619397,2.57347907114715,2.84163499395593,2.07125772535502,1.17263029990548,1.62055855314913,1.42046841351126,1.57411385397923,1.69693824176116,2.32533944750408,1.87791380979733,1.98501082024188,3.94943639792353,4.59668899421467,5.6748166682099,6.72519942156529,4.83010253640311,5.50246316917524,10.9350773253346,4.52780294468852,8.59088835757875,2.64450566663544,1.2797295032114,3.0190767341857,4.25262622362908,2.8235693447268,3.7804267453628,4.1849637744763,10.4396393539793,5.10566759644434,7.79139147280835,6.76452004939913,6.04388670069272,3.59527763461689,6.70027954611552,6.77080329064848,1.32767530667157,2.17072173958485,4.50830942692322,2.44381593414377,2.32742984601151,3.29638353484497,4.36332106157375,6.34723636312289,6.59394656933774,6.91024117962083,5.92905254174298,2.50267658574141,4.32429789249047,3.59779379815766,1.82574109249653,4.3411888755435,3.8193877767213,1.72617682470486,2.91843408195064,3.84385978463314,2.87536413054709,1.86070473834252,3.74445207737473,6.06189307073068,5.20252499213545,2.8946611281802,9.60716588866344,2.27389694124582,2.93336957595647,2.8856664581782,3.28566347603903,4.52266895092903,4.76087281772027,4.87834119644497,4.88668946729192,3.10050565508285,4.78364305972461,8.1931657357869,8.11619414769709,7.37710198765709,9.04747703635634,8.15858525728064,4.42587845717133,6.62248191131358,8.66973185934077,7.2671245687166,5.57378814280696,6.05930225290495,2.52406575533005,5.0757036758563,3.44677436372478,2.15071918157297,3.34198011123591,3.39691836946599,2.02405350837447,5.26060544240361,1.97643888973262,8.9969968598106,4.68402281187286,4.62970569534864,3.90928702448583,6.92874516484649,3.98235415019888,2.42780636154981,3.32555912661226,4.52652191414155,4.72483028609236,4.61152721915891,4.13485269069154,3.99887102425256,4.9909632973861,7.58488219045958,6.32511651449993,3.09406629744561,7.48967132658334,1.8006109403131,3.75140182969988,3.85806663056866,3.01478397191865,5.35106452806212,5.43011767986999,7.00269382963578,2.58138878870081,6.99045833850607,5.07215315526412,4.28704257647848,4.35953952078945,4.52346936961169,4.41677672811605,4.76008609260678,7.28702091574627,8.71498919449395,2.73393409276564,4.95328483111734,2.22233432843654,3.20226376907975,2.7338845544205,2.28778173206523,0.679913719975421,1.11961161858926,1.24379976423981,4.77335309007557,3.16335993581135,3.65975040828328,3.78018692876304,3.55450103224597,5.02233896616208,4.18079473792944,4.95920734352016,7.85267825952089,5.18459893167171,4.97071450469541,11.2738587736838,2.0932316446157,2.48187735685646,1.55560950675238,4.39143399824286,2.87225413334323,3.87278887530988,4.29674469985035,3.04092098834561,4.59009829569411,6.04863013141517,4.10814456816632,3.24360344464263,3.18403967210964,3.37794139742267,3.04345382634718,1.58945083825012,3.4856680360791,4.57837534241189,2.82706059854813,4.03896075271499,2.31900225814733,3.50848370663109,3.65604998233252,3.3894301632655,6.80191150845634,2.44184548711471,0.897138566094757,1.34307693091263,7.92077335531981,7.3196165425961,5.31139710375069,5.78794623513478,5.01572104035363,11.8597886949584,14.2700823317225,8.02053718815155,17.3571714167124,13.7016503954128,13.5970901530146,14.1754725048679,16.2115633160719,9.9691329976525,12.4262474820437,0.726511433089237,1.19707462020309,3.41467211508268,3.8897074730927,2.72497111416377,0.919217542250071,1.77797382241292,4.12070114477788,3.85103051510178,3.79045817645696,4.05566879824384,3.2066478035633,3.09016974650612,3.00918216302886,4.02048282689293,3.81034953026459,4.51948871184936,4.43691207066522,3.70877310722976,3.82717192349433,2.05721551431249,3.54951612318675,4.5302876089991,3.19762116591123,4.04670335785922,3.72304274723377,5.12198324043763,3.6829759601298,4.48153575691344,5.05028044491965,3.55905054372522,3.25064791839359,4.09231043169689,3.71848418846318,4.05103883060397,6.74488560432454,4.91256377735358,3.65280791882107,3.06061331310149,6.17655973534643,5.10109238364927
|short_description=p1@Slc39a3
|short_description=p1@Slc39a3
}}
}}

Latest revision as of 10:35, 26 September 2015

Short description:p1@Slc39a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc39a3_5end
Coexpression cluster:MCL_coexpression_mm9:866
Association with transcript: 0bp_to_ENSMUST00000059551_5end
EntrezGene:Slc39a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc39a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.03
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.74
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D98.33
Mouse Schwann, donor2.CNhs12573.11746-123F95.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D54.36
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell3.69e-0970

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.23e-1454
nervous system1.25e-1375
neural tube2.00e-1352
neural rod2.00e-1352
future spinal cord2.00e-1352
neural keel2.00e-1352
central nervous system3.65e-1373
brain5.05e-1247
future brain5.05e-1247
regional part of brain1.26e-1146
ectoderm-derived structure1.55e-1195
ectoderm1.55e-1195
presumptive ectoderm1.55e-1195
gray matter2.81e-1134
brain grey matter6.01e-1029
regional part of telencephalon6.01e-1029
telencephalon6.01e-1029
neurectoderm7.34e-1064
neural plate7.34e-1064
presumptive neural plate7.34e-1064
anterior neural tube2.41e-0940
regional part of forebrain6.26e-0939
forebrain6.26e-0939
future forebrain6.26e-0939
ecto-epithelium9.02e-0973
cerebral cortex3.55e-0821
cerebral hemisphere3.55e-0821
pallium3.55e-0821
regional part of cerebral cortex1.17e-0717
adult organism2.67e-0751
organ system subdivision3.38e-07194
pre-chordal neural plate4.35e-0749
occipital lobe5.02e-0710
visual cortex5.02e-0710
neocortex5.02e-0710
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