FFCP PHASE1:Mm9::chr10:80500045..80500084,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106947 | |EntrezGene=106947 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=866 | |||
|TSSclassifier=NA | |||
|UniProt=Q99K24 | |UniProt=Q99K24 | ||
|association_with_transcript=0bp_to_ENSMUST00000059551_5end | |association_with_transcript=0bp_to_ENSMUST00000059551_5end | ||
|cluster_id=chr10:80500045..80500084,- | |||
|description=CAGE_peak_1_at_Slc39a3_5end | |description=CAGE_peak_1_at_Slc39a3_5end | ||
|id=chr10:80500045..80500084,- | |id=chr10:80500045..80500084,- | ||
|ontology_enrichment_celltype=CL:0002321!3.69e-09!70;CL:0000220!3.69e-09!70;CL:0000055!6.44e-07!50 | |ontology_enrichment_celltype=CL:0002321!3.69e-09!70;CL:0000220!3.69e-09!70;CL:0000055!6.44e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.69e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.26e-13!75;UBERON:0001016!1.26e-13!75;UBERON:0000955!1.36e-13!50;UBERON:0006238!1.36e-13!50;UBERON:0001049!2.00e-13!52;UBERON:0005068!2.00e-13!52;UBERON:0006241!2.00e-13!52;UBERON:0007135!2.00e-13!52;UBERON:0002616!3.51e-13!49;UBERON:0001017!3.65e-13!73;UBERON:0005743!3.65e-13!73;UBERON:0004121!2.98e-12!102;UBERON:0000924!2.98e-12!102;UBERON:0006601!2.98e-12!102;UBERON:0002020!2.81e-11!34;UBERON:0002346!2.01e-10!71;UBERON:0003075!2.01e-10!71;UBERON:0007284!2.01e-10!71;UBERON:0000033!2.41e-10!63;UBERON:0002791!6.01e-10!29;UBERON:0003528!6.01e-10!29;UBERON:0001893!6.01e-10!29;UBERON:0003080!2.41e-09!40;UBERON:0002780!6.26e-09!39;UBERON:0001890!6.26e-09!39;UBERON:0006240!6.26e-09!39;UBERON:0000956!3.55e-08!21;UBERON:0001869!3.55e-08!21;UBERON:0000203!3.55e-08!21;UBERON:0002619!1.18e-07!17;UBERON:0007023!2.67e-07!51;UBERON:0003056!4.35e-07!49;UBERON:0002021!5.02e-07!10;UBERON:0000411!5.02e-07!10;UBERON:0001950!5.02e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!1.26e-13!75;UBERON:0001016!1.26e-13!75;UBERON:0000955!1.36e-13!50;UBERON:0006238!1.36e-13!50;UBERON:0001049!2.00e-13!52;UBERON:0005068!2.00e-13!52;UBERON:0006241!2.00e-13!52;UBERON:0007135!2.00e-13!52;UBERON:0002616!3.51e-13!49;UBERON:0001017!3.65e-13!73;UBERON:0005743!3.65e-13!73;UBERON:0004121!2.98e-12!102;UBERON:0000924!2.98e-12!102;UBERON:0006601!2.98e-12!102;UBERON:0002020!2.81e-11!34;UBERON:0002346!2.01e-10!71;UBERON:0003075!2.01e-10!71;UBERON:0007284!2.01e-10!71;UBERON:0000033!2.41e-10!63;UBERON:0002791!6.01e-10!29;UBERON:0003528!6.01e-10!29;UBERON:0001893!6.01e-10!29;UBERON:0003080!2.41e-09!40;UBERON:0002780!6.26e-09!39;UBERON:0001890!6.26e-09!39;UBERON:0006240!6.26e-09!39;UBERON:0000956!3.55e-08!21;UBERON:0001869!3.55e-08!21;UBERON:0000203!3.55e-08!21;UBERON:0002619!1.18e-07!17;UBERON:0007023!2.67e-07!51;UBERON:0003056!4.35e-07!49;UBERON:0002021!5.02e-07!10;UBERON:0000411!5.02e-07!10;UBERON:0001950!5.02e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-14,54;UBERON:0001016,1.25e-13,75;UBERON:0001049,2.00e-13,52;UBERON:0005068,2.00e-13,52;UBERON:0006241,2.00e-13,52;UBERON:0007135,2.00e-13,52;UBERON:0001017,3.65e-13,73;UBERON:0000955,5.05e-12,47;UBERON:0006238,5.05e-12,47;UBERON:0002616,1.26e-11,46;UBERON:0004121,1.55e-11,95;UBERON:0000924,1.55e-11,95;UBERON:0006601,1.55e-11,95;UBERON:0002020,2.81e-11,34;UBERON:0003528,6.01e-10,29;UBERON:0002791,6.01e-10,29;UBERON:0001893,6.01e-10,29;UBERON:0002346,7.34e-10,64;UBERON:0003075,7.34e-10,64;UBERON:0007284,7.34e-10,64;UBERON:0003080,2.41e-09,40;UBERON:0002780,6.26e-09,39;UBERON:0001890,6.26e-09,39;UBERON:0006240,6.26e-09,39;UBERON:0010371,9.02e-09,73;UBERON:0000956,3.55e-08,21;UBERON:0001869,3.55e-08,21;UBERON:0000203,3.55e-08,21;UBERON:0002619,1.17e-07,17;UBERON:0007023,2.67e-07,51;UBERON:0011216,3.38e-07,194;UBERON:0003056,4.35e-07,49;UBERON:0002021,5.02e-07,10;UBERON:0000411,5.02e-07,10;UBERON:0001950,5.02e-07,10 | |||
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| ||
|short_description=p1@Slc39a3 | |short_description=p1@Slc39a3 | ||
}} | }} |
Latest revision as of 10:35, 26 September 2015
Short description: | p1@Slc39a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc39a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:866 |
Association with transcript: | 0bp_to_ENSMUST00000059551_5end |
EntrezGene: | Slc39a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.69e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.23e-14 | 54 |
nervous system | 1.25e-13 | 75 |
neural tube | 2.00e-13 | 52 |
neural rod | 2.00e-13 | 52 |
future spinal cord | 2.00e-13 | 52 |
neural keel | 2.00e-13 | 52 |
central nervous system | 3.65e-13 | 73 |
brain | 5.05e-12 | 47 |
future brain | 5.05e-12 | 47 |
regional part of brain | 1.26e-11 | 46 |
ectoderm-derived structure | 1.55e-11 | 95 |
ectoderm | 1.55e-11 | 95 |
presumptive ectoderm | 1.55e-11 | 95 |
gray matter | 2.81e-11 | 34 |
brain grey matter | 6.01e-10 | 29 |
regional part of telencephalon | 6.01e-10 | 29 |
telencephalon | 6.01e-10 | 29 |
neurectoderm | 7.34e-10 | 64 |
neural plate | 7.34e-10 | 64 |
presumptive neural plate | 7.34e-10 | 64 |
anterior neural tube | 2.41e-09 | 40 |
regional part of forebrain | 6.26e-09 | 39 |
forebrain | 6.26e-09 | 39 |
future forebrain | 6.26e-09 | 39 |
ecto-epithelium | 9.02e-09 | 73 |
cerebral cortex | 3.55e-08 | 21 |
cerebral hemisphere | 3.55e-08 | 21 |
pallium | 3.55e-08 | 21 |
regional part of cerebral cortex | 1.17e-07 | 17 |
adult organism | 2.67e-07 | 51 |
organ system subdivision | 3.38e-07 | 194 |
pre-chordal neural plate | 4.35e-07 | 49 |
occipital lobe | 5.02e-07 | 10 |
visual cortex | 5.02e-07 | 10 |
neocortex | 5.02e-07 | 10 |