FFCP PHASE1:Mm9::chr6:108778520..108778536,+: Difference between revisions
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{{FFCP|EntrezGene=192193|HGNC=|MCL_coexpression_id=4|UniProt=Q925U4,Q6ZQG3|association_with_transcript=-98bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end|description=CAGE_peak_3_at_Edem1_5end|id=chr6:108778520..108778536,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,9.18e-13,9;CL:0000789,9.18e-13,9;CL:0002420,9.18e-13,9;CL:0002419,9.18e-13,9;CL:0000790,9.18e-13,9;CL:0000624,2.02e-10,8;CL:0000084,2.43e-10,11;CL:0000827,2.43e-10,11;CL:0000838,1.97e-09,12;CL:0000893,3.46e-09,6;CL:0002489,3.46e-09,6;CL:0000898,3.46e-09,6;CL:0000809,3.46e-09,6;CL:0000810,3.46e-09,6;CL:0000895,3.46e-09,6;CL:0000808,3.46e-09,6;CL:0000894,3.46e-09,6;CL:0000806,3.46e-09,6;CL:0000807,3.46e-09,6;CL:0000805,3.46e-09,6;CL:0002425,3.46e-09,6;CL:0002436,3.46e-09,6;CL:0002427,3.46e-09,6;CL:0002428,3.46e-09,6;CL:0002429,3.46e-09,6;CL:0002433,3.46e-09,6;CL:0002431,3.46e-09,6;CL:0002432,3.46e-09,6;CL:0000542,1.16e-08,13;CL:0000051,1.16e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.60e-09!23;UBERON:0000974!1.60e-09!23;UBERON:0004807!1.60e-09!23;UBERON:0005058!1.60e-09!23;UBERON:0003351!1.60e-09!23;UBERON:0009113!1.60e-09!23;UBERON:0003295!1.60e-09!23;UBERON:0009722!1.60e-09!23;UBERON:0005562!1.60e-09!23;UBERON:0007690!1.60e-09!23;UBERON:0006562!1.36e-08!24;UBERON:0003408!1.36e-08!24;UBERON:0001557!1.36e-08!24;UBERON:0001042!1.36e-08!24;UBERON:0008814!1.36e-08!24;UBERON:0009145!1.36e-08!24;UBERON:0004177!2.29e-07!29;UBERON:0000072!3.39e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.54e-36,23;UBERON:0000974,4.54e-36,23;UBERON:0004807,4.54e-36,23;UBERON:0005058,4.54e-36,23;UBERON:0003351,4.54e-36,23;UBERON:0009113,4.54e-36,23;UBERON:0003295,4.54e-36,23;UBERON:0009722,4.54e-36,23;UBERON:0005562,4.54e-36,23;UBERON:0007690,4.54e-36,23;UBERON:0006562,1.96e-34,24;UBERON:0003408,1.96e-34,24;UBERON:0001557,1.96e-34,24;UBERON:0001042,1.96e-34,24;UBERON:0008814,1.96e-34,24;UBERON:0009145,1.96e-34,24;UBERON:0000072,2.99e-30,27;UBERON:0004177,6.10e-28,29;UBERON:0005057,6.10e-28,29;UBERON:0000077,1.35e-22,35;UBERON:0007811,7.06e-22,36;UBERON:0000065,2.61e-21,41;UBERON:0001004,1.02e-20,42;UBERON:0000153,8.73e-18,43;UBERON:0002390,7.53e-17,45;UBERON:0003061,7.53e-17,45;UBERON:0002193,1.36e-15,48;UBERON:0002405,1.36e-15,48;UBERON:0003929,3.43e-13,55;UBERON:0002368,8.07e-12,60;UBERON:0005911,2.93e-11,69;UBERON:0000949,1.12e-10,72;UBERON:0002530,1.17e-10,65;UBERON:0001041,1.76e-10,80;UBERON:0000490,1.90e-10,66;UBERON:0004921,3.73e-08,114;UBERON:0001007,6.04e-08,116;UBERON:0001555,6.04e-08,116;UBERON:0007026,6.04e-08,116;UBERON:0004119,9.62e-08,118;UBERON:0000925,9.62e-08,118;UBERON:0006595,9.62e-08,118;UBERON:0003081,3.82e-07,87|phase1_expression=0.480446541314382,0.697950815278722,0,0,0.500895729946347,0,0.233612640595526,2.7115897922731,0.703943610758334,1.63845168425395,0.34243593645101,1.19658238493005,2.05440875917447,3.4968160967599,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0,0.595303031057488,0.496454756004426,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0,0,0,0,0,0.61506478758457,0,0,0.332469290716985,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.671130424230945,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.03689612308478,0.270011876663381,0.420649922702764,0,0.662605622854841,0.979926393719632,0.766763768145891,0,0,0.383062014255563,0.46081959976873,0.791317726381163,0.457438218012048,0.52091337055676,0,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0.37863096666592,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0.506719730950197,0,0.11418387971906,0.517875767294343,0,0.693941307064543,0,0,0.301445281105245,0.470354828542819,0.251333182659351,0.494389935468748,0,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0.420883711772948,0.780722657776222,0.689706313300419,0.180062129805349,0.30140963567143,0.476255494059295,0.768682321709099,0.468508622798644,0,0.646703978798527,0.756424320671277,0.175951124163949,0.657587197282725,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0,0,0.146199987425332,0,0,0.210289948564127,0.823236899034275,0,0,0,0.696710015581316,1.03093969057675,1.21010114774006,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192193 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q925U4,Q6ZQG3 | |||
|association_with_transcript=-98bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end | |||
|cluster_id=chr6:108778520..108778536,+ | |||
|description=CAGE_peak_3_at_Edem1_5end | |||
|id=chr6:108778520..108778536,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.18e-13,9;CL:0000789,9.18e-13,9;CL:0002420,9.18e-13,9;CL:0002419,9.18e-13,9;CL:0000790,9.18e-13,9;CL:0000624,2.02e-10,8;CL:0000084,2.43e-10,11;CL:0000827,2.43e-10,11;CL:0000838,1.97e-09,12;CL:0000893,3.46e-09,6;CL:0002489,3.46e-09,6;CL:0000898,3.46e-09,6;CL:0000809,3.46e-09,6;CL:0000810,3.46e-09,6;CL:0000895,3.46e-09,6;CL:0000808,3.46e-09,6;CL:0000894,3.46e-09,6;CL:0000806,3.46e-09,6;CL:0000807,3.46e-09,6;CL:0000805,3.46e-09,6;CL:0002425,3.46e-09,6;CL:0002436,3.46e-09,6;CL:0002427,3.46e-09,6;CL:0002428,3.46e-09,6;CL:0002429,3.46e-09,6;CL:0002433,3.46e-09,6;CL:0002431,3.46e-09,6;CL:0002432,3.46e-09,6;CL:0000542,1.16e-08,13;CL:0000051,1.16e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.60e-09!23;UBERON:0000974!1.60e-09!23;UBERON:0004807!1.60e-09!23;UBERON:0005058!1.60e-09!23;UBERON:0003351!1.60e-09!23;UBERON:0009113!1.60e-09!23;UBERON:0003295!1.60e-09!23;UBERON:0009722!1.60e-09!23;UBERON:0005562!1.60e-09!23;UBERON:0007690!1.60e-09!23;UBERON:0006562!1.36e-08!24;UBERON:0003408!1.36e-08!24;UBERON:0001557!1.36e-08!24;UBERON:0001042!1.36e-08!24;UBERON:0008814!1.36e-08!24;UBERON:0009145!1.36e-08!24;UBERON:0004177!2.29e-07!29;UBERON:0000072!3.39e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.54e-36,23;UBERON:0000974,4.54e-36,23;UBERON:0004807,4.54e-36,23;UBERON:0005058,4.54e-36,23;UBERON:0003351,4.54e-36,23;UBERON:0009113,4.54e-36,23;UBERON:0003295,4.54e-36,23;UBERON:0009722,4.54e-36,23;UBERON:0005562,4.54e-36,23;UBERON:0007690,4.54e-36,23;UBERON:0006562,1.96e-34,24;UBERON:0003408,1.96e-34,24;UBERON:0001557,1.96e-34,24;UBERON:0001042,1.96e-34,24;UBERON:0008814,1.96e-34,24;UBERON:0009145,1.96e-34,24;UBERON:0000072,2.99e-30,27;UBERON:0004177,6.10e-28,29;UBERON:0005057,6.10e-28,29;UBERON:0000077,1.35e-22,35;UBERON:0007811,7.06e-22,36;UBERON:0000065,2.61e-21,41;UBERON:0001004,1.02e-20,42;UBERON:0000153,8.73e-18,43;UBERON:0002390,7.53e-17,45;UBERON:0003061,7.53e-17,45;UBERON:0002193,1.36e-15,48;UBERON:0002405,1.36e-15,48;UBERON:0003929,3.43e-13,55;UBERON:0002368,8.07e-12,60;UBERON:0005911,2.93e-11,69;UBERON:0000949,1.12e-10,72;UBERON:0002530,1.17e-10,65;UBERON:0001041,1.76e-10,80;UBERON:0000490,1.90e-10,66;UBERON:0004921,3.73e-08,114;UBERON:0001007,6.04e-08,116;UBERON:0001555,6.04e-08,116;UBERON:0007026,6.04e-08,116;UBERON:0004119,9.62e-08,118;UBERON:0000925,9.62e-08,118;UBERON:0006595,9.62e-08,118;UBERON:0003081,3.82e-07,87 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0,0,0.500895729946347,0,0.233612640595526,2.7115897922731,0.703943610758334,1.63845168425395,0.34243593645101,1.19658238493005,2.05440875917447,3.4968160967599,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0,0.595303031057488,0.496454756004426,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0,0,0,0,0,0.61506478758457,0,0,0.332469290716985,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.671130424230945,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.03689612308478,0.270011876663381,0.420649922702764,0,0.662605622854841,0.979926393719632,0.766763768145891,0,0,0.383062014255563,0.46081959976873,0.791317726381163,0.457438218012048,0.52091337055676,0,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0.37863096666592,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0.506719730950197,0,0.11418387971906,0.517875767294343,0,0.693941307064543,0,0,0.301445281105245,0.470354828542819,0.251333182659351,0.494389935468748,0,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0.420883711772948,0.780722657776222,0.689706313300419,0.180062129805349,0.30140963567143,0.476255494059295,0.768682321709099,0.468508622798644,0,0.646703978798527,0.756424320671277,0.175951124163949,0.657587197282725,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0,0,0.146199987425332,0,0,0.210289948564127,0.823236899034275,0,0,0,0.696710015581316,1.03093969057675,1.21010114774006,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.379335801906163,0.456994050438915,0,0.610953983535943,0.193952487167626,0.350679099451593,0.252946148497029,0,0,0.246794327843601,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,1.14075483509418,0.339490171550376,0,0.670025029767263,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,1.22974059177571,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,0,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0.847328283455281,0,0.65954501176592,0.484393280087717,0.482503399425247,0.596861720015682,0.492422699235184,0,0,0,0.206386867963223,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.552799895217695,0.954670618015114,0.632671987162271,1.01659733563424,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.469428954583016,0.2604087696879,0.734015410979976,0.241584120826006,0.864090018773596,3.16011120628178,0.810900861160657,0.616265742988964,1.16928740680016,1.25318686967237,2.78153896693771,4.56742708175882,4.13530676088816,4.4425237977185,5.48689007915999,4.94048307170519,4.48306251402861,5.09922760693746,5.2594605981706,0,0.887943813496259,0.538283139656854,0.335769232728157,0.386379188064381,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,0.675022500231806,0,0,0,0.415149390336707,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,0.412070114477788,0.962757628775446,0,0.760437899670719,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0,0.407412341537585,1.12228454331548,0.355905054372522,0.591026894253381,0,0.154936841185966,0.578719832943424,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Edem1 | |||
}} |
Latest revision as of 10:51, 26 September 2015
Short description: | p3@Edem1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Edem1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -98bp_to_ENSMUST00000089162, ENSMUST00000169217, NM_138677, uc009ddq.1, uc009ddr.1_5end |
EntrezGene: | Edem1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data