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FFCP PHASE1:Mm9::chr2:29108442..29108469,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76220
|EntrezGene=76220
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=43bp_to_ENSMUST00000155949,NR_029460_5end
|association_with_transcript=43bp_to_ENSMUST00000155949,NR_029460_5end
|cluster_id=chr2:29108442..29108469,-
|description=CAGE_peak_1_at_6530402F18Rik_5end
|description=CAGE_peak_1_at_6530402F18Rik_5end
|id=chr2:29108442..29108469,-
|id=chr2:29108442..29108469,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,9.55e-07,23;CL:0000337,9.55e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.85e-13!102;UBERON:0000924!9.85e-13!102;UBERON:0006601!9.85e-13!102;UBERON:0000033!2.57e-12!63;UBERON:0002346!2.77e-11!71;UBERON:0003075!2.77e-11!71;UBERON:0007284!2.77e-11!71;UBERON:0003056!1.19e-10!49;UBERON:0000073!1.97e-08!75;UBERON:0001016!1.97e-08!75;UBERON:0001017!3.92e-08!73;UBERON:0005743!3.92e-08!73;UBERON:0001049!9.65e-08!52;UBERON:0005068!9.65e-08!52;UBERON:0006241!9.65e-08!52;UBERON:0007135!9.65e-08!52;UBERON:0000955!9.73e-08!50;UBERON:0006238!9.73e-08!50;UBERON:0002616!1.04e-07!49;UBERON:0000475!1.89e-07!200;UBERON:0003080!3.30e-07!40;UBERON:0002780!6.81e-07!39;UBERON:0001890!6.81e-07!39;UBERON:0006240!6.81e-07!39;UBERON:0007811!9.29e-07!86
|ontology_enrichment_uberon=UBERON:0004121!9.85e-13!102;UBERON:0000924!9.85e-13!102;UBERON:0006601!9.85e-13!102;UBERON:0000033!2.57e-12!63;UBERON:0002346!2.77e-11!71;UBERON:0003075!2.77e-11!71;UBERON:0007284!2.77e-11!71;UBERON:0003056!1.19e-10!49;UBERON:0000073!1.97e-08!75;UBERON:0001016!1.97e-08!75;UBERON:0001017!3.92e-08!73;UBERON:0005743!3.92e-08!73;UBERON:0001049!9.65e-08!52;UBERON:0005068!9.65e-08!52;UBERON:0006241!9.65e-08!52;UBERON:0007135!9.65e-08!52;UBERON:0000955!9.73e-08!50;UBERON:0006238!9.73e-08!50;UBERON:0002616!1.04e-07!49;UBERON:0000475!1.89e-07!200;UBERON:0003080!3.30e-07!40;UBERON:0002780!6.81e-07!39;UBERON:0001890!6.81e-07!39;UBERON:0006240!6.81e-07!39;UBERON:0007811!9.29e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.24e-11,95;UBERON:0000924,3.24e-11,95;UBERON:0006601,3.24e-11,95;UBERON:0003056,6.03e-11,49;UBERON:0002346,7.67e-10,64;UBERON:0003075,7.67e-10,64;UBERON:0007284,7.67e-10,64;UBERON:0010371,1.44e-09,73;UBERON:0001016,8.40e-09,75;UBERON:0001017,1.72e-08,73;UBERON:0001049,4.45e-08,52;UBERON:0005068,4.45e-08,52;UBERON:0006241,4.45e-08,52;UBERON:0007135,4.45e-08,52;UBERON:0000073,5.64e-08,54;UBERON:0000955,9.10e-08,47;UBERON:0006238,9.10e-08,47;UBERON:0002616,9.66e-08,46;UBERON:0003080,2.16e-07,40;UBERON:0002780,4.56e-07,39;UBERON:0001890,4.56e-07,39;UBERON:0006240,4.56e-07,39;UBERON:0000020,6.97e-07,12;UBERON:0001032,6.97e-07,12;UBERON:0004456,6.97e-07,12
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|phase1_expression=21.9403920533568,0.348975407639361,0,0,0,0.839396359559449,0.467225281191051,2.32421982194837,3.94208422024667,5.14941957908386,1.02730780935303,1.03703806693937,0.342401459862411,0.34968160967599,0.333109761815663,0.607425802169478,0,0.473193248037357,0.548457734422955,1.27316895539409,2.63634199468316,4.86525660884338,5.48519557191764,0.95995453676044,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0,128.489210636231,60.9441568728564,84.8108465237553,130.587390342885,117.483823412853,126.718202141131,1.76255545165808,2.43304634926835,1.46837401729345,0,2.18025156380447,3.51497892375155,2.3331587888914,1.25987779462826,4.31257693094915,0.838913030288682,2.17608642603403,0,1.02903774414379,1.14613375975503,0.515672092277442,11.3297218081375,11.1088105647127,12.0427966666174,0,0,0.449949858640699,1.97773272513395,4.2628806896766,5.99200221036809,10.373894243682,5.91030790158323,7.2903206699113,6.94072372459561,1.99955689082663,2.87129103237098,3.42974237801871,1.82106394934649,5.51531271966013,2.20231761998777,2.93680877595932,2.76491759861238,8.44072241473241,8.41686321142169,7.29278718779464,3.90856198601933,6.19038871034848,4.43114918552749,2.94628585473668,1.28134512719193,1.67759501242771,1.96888102666279,5.29000920747499,12.4641730141721,5.16254326188832,0,0,1.29955283489534,0.448026887097336,3.7919993435573,0.852151612890289,0.519572009205738,1.7666978725517,14.3660288172214,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,2.16949371466214,3.88406825470758,12.0238132642508,0.867426633830679,4.26251669636998,5.5347719341454,3.91878865436819,4.9387256996996,7.41432888845085,0,3.90418263683761,13.2691582792481,3.72063754879041,5.74187947997023,5.33362778448744,1.86391761218122,1.75668478206928,3.14170060220183,1.53274233125155,3.71426885968353,2.39961092397363,3.55796635804581,4.6435098215495,3.20250421973039,1.00523481690292,3.65031072403781,4.09144731728529,2.90903262383384,4.54275536589721,1.73126918545538,8.21086006026614,0.505445516867349,15.1518136238261,1.04096354370163,3.21862946206862,9.36323074987816,19.2902166829715,32.3173370968807,33.6939084349155,43.1027932974753,23.2833033665114,0,0,0.527853372491847,0,0.556094498451196,1.0447564995665,0.61734640922383,2.7864797354589,1.40442637462647,1.80143534980301,3.40996199274711,1.24275463521301,0,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0.536546802799238,0.350296027101508,0.329119699826961,0.820837320395476,1.21603214318784,0.584799949701329,2.41505126820156,2.01309628140558,2.10289948564127,6.27718135513635,0,1.32225283331772,1.49301775374664,0.232236671860439,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,1.16978452271472,2.69645822596266,1.08069024937347,0.995706366271836,2.46568271239006,4.22719496655997,5.63538678365402,6.10953983535943,6.40043207653165,2.52488951605147,4.23684798732524,2.06654207171443,3.45397201251025,2.46794327843601,2.07516838961004,0.333690211432188,0.393117990226406,0,0.811440485554012,1.4470629585145,3.05551022137704,1.43848068725405,1.13494658742525,0.823684239564244,2.87536413054709,2.97712758134803,3.43241440426017,1.01031551178845,1.97337154874103,1.92977408545347,4.61882975416512,0.37898282354097,0.651859905768103,0.678980343100753,0.234690248288502,2.1775813467436,2.85652369063216,4.29294025287157,10.5615546551148,8.63712289630222,12.756381492599,4.42430949732493,6.90739927463582,7.23245292907558,0,1.08781136763742,1.47529281905711,3.31124095565679,6.42202359951168,8.90808818100744,0,6.31177318010932,0.315508219416257,0.390438744296638,0.430846795465598,1.67278158566786,1.55959071857676,2.83076530788832,0.404810701674894,0.292255857911312,1.58115111178609,2.24924921495265,3.97432238583152,0.178065603667255,1.30309567482861,3.62934270539578,1.32745138339963,0,0.302323556964751,0,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,1.42598951353889,0.948110273807448,0,1.03135543248187,3.06395645178409,1.26042765821917,2.32845630808958,4.28674070063185,4.07882537377229,1.96205699362278,2.46823530903181,5.48036908406279,2.58138878870081,1.48282449604674,0.661585194164886,1.6488625294148,1.13025098687134,1.5078231232039,1.19372344003136,0.984845398470368,1.45740418314925,7.97328798645192,8.03093139749908,2.06386867963222,1.85194527369712,3.57900068308913,2.05041341581538,1.37266903923914,7.64902934972349,6.01791244991729,7.46279858543889,1.90934123603023,0.790839983952838,0.609958401380546,0.540026704109006,0.836353184057875,1.09181281873089,0.809186078308924,1.57041565878138,2.35580347785627,1.29614973291793,1.24267862617385,0,1.94371509857172,1.15820943319968,0.583353565032143,1.16243841129958,0.844780627453891,2.22978753426933,2.73429208172295,1.78260885523708,0.241584120826006,1.15212002503146,1.89606672376907,0.405450430580328,1.64337531463724,2.33857481360031,0.716106782669926,0.596044064343795,0.721172697119813,0.738447635872886,0.605798699688886,1.21930890648,0.907435666231565,1.26695244961678,0.962118416403295,2.80504565235765,5.66825959038028,0,0,0.167884616364078,5.9888774149979,3.75364950902364,2.38097111547445,2.35805216986972,2.00628841614145,2.82375921308533,3.68260189205742,1.71868654031819,2.92150409984269,2.05524755931193,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,2.07104124700728,1.66059756134683,1.99512436700516,2.56100408631201,1.94485373654635,1.67690530102386,0.919217542250071,1.77797382241292,2.26638562962784,1.28367683836726,2.27427490587418,2.28131369901216,2.45214243801899,1.40462261204824,2.04880487695582,3.10151532360312,0.952587382566147,3.24476112645595,2.31491064556446,4.12085900803307,2.06078488188156,1.71434626192708,1.95223386775271,0.715308569841963,2.61623549938191,1.88218760830661,2.45382362885862,2.92684756596436,1.8414879800649,1.7654534799962,1.12228454331548,2.13543032623513,2.36410757701352,0.409231043169689,1.85924209423159,2.50778594275484,3.74715866906919,1.87145286756327,1.50409737833809,1.91288332068843,3.52946270591225,4.63735671240843
|short_description=p1@6530402F18Rik
|short_description=p1@6530402F18Rik
}}
}}

Latest revision as of 12:27, 26 September 2015

Short description:p1@6530402F18Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_6530402F18Rik_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 43bp_to_ENSMUST00000155949, NR_029460_5end
EntrezGene:6530402F18Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@6530402F18Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8128.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H384.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9130.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2117.48
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4126.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D712.02
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.21
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G415.15
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D419.29
eyeball, neonate N00.CNhs11207.633-15C632.32
eyeball, neonate N01.CNhs11140.1532-43E733.69
eyeball, neonate N02.CNhs11205.1551-44G843.10
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D54.24
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A38.64
lung, neonate N10.CNhs11219.750-23E612.76
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.55e-0723
neuroblast (sensu Vertebrata)9.55e-0723

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.24e-1195
ectoderm3.24e-1195
presumptive ectoderm3.24e-1195
pre-chordal neural plate6.03e-1149
neurectoderm7.67e-1064
neural plate7.67e-1064
presumptive neural plate7.67e-1064
ecto-epithelium1.44e-0973
nervous system8.40e-0975
central nervous system1.72e-0873
neural tube4.45e-0852
neural rod4.45e-0852
future spinal cord4.45e-0852
neural keel4.45e-0852
regional part of nervous system5.64e-0854
brain9.10e-0847
future brain9.10e-0847
regional part of brain9.66e-0846
anterior neural tube2.16e-0740
regional part of forebrain4.56e-0739
forebrain4.56e-0739
future forebrain4.56e-0739
sense organ6.97e-0712
sensory system6.97e-0712
entire sense organ system6.97e-0712
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