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FFCP PHASE1:Mm9::chr6:118147404..118147415,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19713
|EntrezGene=19713
|HGNC=
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=E9PZG6
|UniProt=E9PZG6
|association_with_transcript=-57bp_to_ENSMUST00000169872_5end
|association_with_transcript=-57bp_to_ENSMUST00000169872_5end
|cluster_id=chr6:118147404..118147415,-
|description=CAGE_peak_3_at_Ret_5end
|description=CAGE_peak_3_at_Ret_5end
|id=chr6:118147404..118147415,-
|id=chr6:118147404..118147415,-
|ontology_enrichment_celltype=CL:0000540!8.12e-13!33;CL:0000047!8.12e-13!33;CL:0000031!8.12e-13!33;CL:0000404!8.12e-13!33;CL:0002319!1.19e-11!43;CL:0000221!5.43e-11!44;CL:0000133!5.43e-11!44;CL:0000393!7.60e-10!39;CL:0000211!7.60e-10!39;CL:0000055!8.03e-09!50;CL:0000107!7.71e-08!9;CL:0000117!2.83e-07!23;CL:0000337!2.83e-07!23
|ontology_enrichment_celltype=CL:0000540!8.12e-13!33;CL:0000047!8.12e-13!33;CL:0000031!8.12e-13!33;CL:0000404!8.12e-13!33;CL:0002319!1.19e-11!43;CL:0000221!5.43e-11!44;CL:0000133!5.43e-11!44;CL:0000393!7.60e-10!39;CL:0000211!7.60e-10!39;CL:0000055!8.03e-09!50;CL:0000107!7.71e-08!9;CL:0000117!2.83e-07!23;CL:0000337!2.83e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,6.13e-30,33;CL:0000047,6.13e-30,33;CL:0000031,6.13e-30,33;CL:0000404,6.13e-30,33;CL:0000393,2.72e-24,39;CL:0000211,2.72e-24,39;CL:0002319,1.87e-23,43;CL:0000221,9.21e-23,44;CL:0000133,9.21e-23,44;CL:0000107,4.13e-18,9;CL:0000117,8.75e-16,23;CL:0000337,8.75e-16,23;CL:0002321,8.66e-12,70;CL:0002612,5.31e-07,3;CL:0002614,8.29e-07,3;CL:0000723,8.53e-07,91;CL:0000048,8.53e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.22e-14!75;UBERON:0001016!4.22e-14!75;UBERON:0001017!6.10e-14!73;UBERON:0005743!6.10e-14!73;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0002410!7.71e-08!9;UBERON:0002346!7.73e-08!71;UBERON:0003075!7.73e-08!71;UBERON:0007284!7.73e-08!71;UBERON:0000010!2.14e-07!11;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12
|ontology_enrichment_uberon=UBERON:0000073!4.22e-14!75;UBERON:0001016!4.22e-14!75;UBERON:0001017!6.10e-14!73;UBERON:0005743!6.10e-14!73;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0002410!7.71e-08!9;UBERON:0002346!7.73e-08!71;UBERON:0003075!7.73e-08!71;UBERON:0007284!7.73e-08!71;UBERON:0000010!2.14e-07!11;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.79e-22,73;UBERON:0001016,3.80e-21,75;UBERON:0002410,4.13e-18,9;UBERON:0004121,3.65e-16,95;UBERON:0000924,3.65e-16,95;UBERON:0006601,3.65e-16,95;UBERON:0000010,1.99e-14,11;UBERON:0002240,1.22e-12,6;UBERON:0005174,1.22e-12,6;UBERON:0001137,1.22e-12,6;UBERON:0003076,1.52e-12,12;UBERON:0003057,1.52e-12,12;UBERON:0001948,7.83e-11,5;UBERON:0002315,7.83e-11,5;UBERON:0000073,1.11e-10,54;UBERON:0002346,1.90e-09,64;UBERON:0003075,1.90e-09,64;UBERON:0007284,1.90e-09,64;UBERON:0001049,7.31e-09,52;UBERON:0005068,7.31e-09,52;UBERON:0006241,7.31e-09,52;UBERON:0007135,7.31e-09,52;UBERON:0002950,2.47e-08,4;UBERON:0001891,2.47e-08,4;UBERON:0009616,2.47e-08,4;UBERON:0010286,2.47e-08,4;UBERON:0010371,1.31e-07,73;UBERON:0000013,1.54e-07,3;UBERON:0010313,4.24e-07,3;UBERON:0002342,4.24e-07,3;UBERON:0002005,4.24e-07,3;UBERON:0005428,4.24e-07,3;UBERON:0005062,4.24e-07,3;UBERON:0002257,5.31e-07,3;UBERON:0002038,8.29e-07,3;UBERON:0009663,8.29e-07,3;UBERON:0009661,8.29e-07,3;UBERON:0000125,8.29e-07,3;UBERON:0002308,8.29e-07,3;UBERON:0011216,9.22e-07,194
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,2.34717403304412,0,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0.514518872071894,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0.270011876663381,0,8.85518051651791,6.62605622854841,0,0.191690942036473,0,2.20231761998777,5.10749352340751,3.84016333140609,1.18697658957174,0.823388792421687,1.56274011167028,7.53794097303729,5.06486349028512,2.75036845998258,5.30331453852602,7.83044244395066,3.91438836233131,0.227178579999552,0.453429360640713,0,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.693941307064543,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.808834249737046,0,0,1.86391761218122,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,0.457500602818626,0.879580464790051,0.521472960576829,0,3.32460871295296,2.10913641988085,0,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.816437989815934,0.2562274405697,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0.660837565967596,0,0.853153002140936,0.464473343720877,1.15980715189884,1.21010114774006,0.667134131534611,0.951128130562796,0,1.31759163779209,0.502670417600539,1.39269530428806,0.19496408711912,0,0.432276099749388,0,0.948339504765408,0.571242563048644,1.1270773567308,1.01825663922657,0.387904974335251,0.701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,2.88991061978026,3.39913891117389,0,0.757412781613119,7.88770548540642,6.24701990874622,4.52389135238878,3.34556317133573,4.23317480756549,4.81230102341015,8.90583543684768,12.8592577480977,8.69633111482352,0.642642632843614,0,0,0,0,0,0.728341908464944,2.11626489875326,2.07465587731488,0.295301892880773,0,0,0,0.356497378384721,0,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0.891844088010353,0.822745103010605,2.13125464380219,0,0,0.661585194164886,0.49465875882444,0.322928853391811,0.180938774784468,0.119372344003136,0.820704498725306,0.874442509889552,5.19190845629427,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.972048067396211,0.418176592028937,0.655087691238533,0.134864346384821,0.247960367176008,0,0.129614973291793,4.34937519160848,0,0,0.330916980914195,0.388902376688095,0.516639293910924,0,0.234714477291508,1.95306577265925,1.15345278868282,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.448569283047378,0.503653849092235,0.579568782096571,0,0.183151624267265,0,0,1.12950368523413,0,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.972426868273176,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.0936415074698824,0.640251524048693,0.229741875822453,0,0.463537303779422,0.578727661391115,1.64834360321323,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.191288332068843,0.661774257358546,0.695603506861264
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,2.34717403304412,0,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0.514518872071894,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0.270011876663381,0,8.85518051651791,6.62605622854841,0,0.191690942036473,0,2.20231761998777,5.10749352340751,3.84016333140609,1.18697658957174,0.823388792421687,1.56274011167028,7.53794097303729,5.06486349028512,2.75036845998258,5.30331453852602,7.83044244395066,3.91438836233131,0.227178579999552,0.453429360640713,0,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.693941307064543,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.808834249737046,0,0,1.86391761218122,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,0.457500602818626,0.879580464790051,0.521472960576829,0,3.32460871295296,2.10913641988085,0,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.816437989815934,0.2562274405697,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0.660837565967596,0,0.853153002140936,0.464473343720877,1.15980715189884,1.21010114774006,0.667134131534611,0.951128130562796,0,1.31759163779209,0.502670417600539,1.39269530428806,0.19496408711912,0,0.432276099749388,0,0.948339504765408,0.571242563048644,1.1270773567308,1.01825663922657,0.387904974335251,0.701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,2.88991061978026,3.39913891117389,0,0.757412781613119,7.88770548540642,6.24701990874622,4.52389135238878,3.34556317133573,4.23317480756549,4.81230102341015,8.90583543684768,12.8592577480977,8.69633111482352,0.642642632843614,0,0,0,0,0,0.728341908464944,2.11626489875326,2.07465587731488,0.295301892880773,0,0,0,0.356497378384721,0,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0.891844088010353,0.822745103010605,2.13125464380219,0,0,0.661585194164886,0.49465875882444,0.322928853391811,0.180938774784468,0.119372344003136,0.820704498725306,0.874442509889552,5.19190845629427,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.972048067396211,0.418176592028937,0.655087691238533,0.134864346384821,0.247960367176008,0,0.129614973291793,4.34937519160848,0,0,0.330916980914195,0.388902376688095,0.516639293910924,0,0.234714477291508,1.95306577265925,1.15345278868282,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.448569283047378,0.503653849092235,0.579568782096571,0,0.183151624267265,0,0,1.12950368523413,0,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.972426868273176,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.0936415074698824,0.640251524048693,0.229741875822453,0,0.463537303779422,0.578727661391115,1.64834360321323,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.191288332068843,0.661774257358546,0.695603506861264
|short_description=p3@Ret
|short_description=p3@Ret
}}
}}

Latest revision as of 13:02, 26 September 2015

Short description:p3@Ret
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ret_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: -57bp_to_ENSMUST00000169872_5end
EntrezGene:Ret
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ret

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system5.79e-2273
nervous system3.80e-2175
autonomic nervous system4.13e-189
ectoderm-derived structure3.65e-1695
ectoderm3.65e-1695
presumptive ectoderm3.65e-1695
peripheral nervous system1.99e-1411
spinal cord1.22e-126
dorsal region element1.22e-126
dorsum1.22e-126
posterior neural tube1.52e-1212
chordal neural plate1.52e-1212
regional part of spinal cord7.83e-115
gray matter of spinal cord7.83e-115
regional part of nervous system1.11e-1054
neurectoderm1.90e-0964
neural plate1.90e-0964
presumptive neural plate1.90e-0964
neural tube7.31e-0952
neural rod7.31e-0952
future spinal cord7.31e-0952
neural keel7.31e-0952
regional part of midbrain2.47e-084
midbrain2.47e-084
presumptive midbrain2.47e-084
midbrain neural tube2.47e-084
ecto-epithelium1.31e-0773
sympathetic nervous system1.54e-073
neural crest-derived structure4.24e-073
neural crest4.24e-073
enteric nervous system4.24e-073
vagal neural crest4.24e-073
neural fold4.24e-073
ventral horn of spinal cord5.31e-073
substantia nigra8.29e-073
telencephalic nucleus8.29e-073
midbrain nucleus8.29e-073
neural nucleus8.29e-073
nucleus of brain8.29e-073
organ system subdivision9.22e-07194
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