FFCP PHASE1:Mm9::chr6:119146608..119146615,-: Difference between revisions
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|id=chr6:119146608..119146615,-
|short_description=p10@Cacna1c
|description=CAGE_peak_10_at_Cacna1c_5end
|association_with_transcript=-181bp_to_NM_001255997,NM_0012...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12288 | |EntrezGene=12288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q0PCR6,Q3UY08 | |UniProt=Q0PCR6,Q3UY08 | ||
|association_with_transcript=-181bp_to_NM_001255997,NM_001255998,NM_001255999,NM_009781,uc009dlu.2_5end | |||
|cluster_id=chr6:119146608..119146615,- | |||
|description=CAGE_peak_10_at_Cacna1c_5end | |||
|id=chr6:119146608..119146615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.87e-49!18;UBERON:0000948!5.87e-49!18;UBERON:0005498!5.87e-49!18;UBERON:0004140!5.87e-49!18;UBERON:0009881!5.87e-49!18;UBERON:0004141!5.87e-49!18;UBERON:0003084!5.87e-49!18;UBERON:0007005!5.87e-49!18;UBERON:0004139!5.87e-49!18;UBERON:0004291!5.87e-49!18;UBERON:0004535!1.21e-37!23;UBERON:0001009!1.21e-37!23;UBERON:0004872!2.76e-25!33;UBERON:0003103!3.76e-21!43;UBERON:0003914!4.86e-19!47;UBERON:0003081!1.74e-07!88;UBERON:0000025!9.30e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.84e-67,18;UBERON:0000948,3.84e-67,18;UBERON:0005498,3.84e-67,18;UBERON:0004140,3.84e-67,18;UBERON:0009881,3.84e-67,18;UBERON:0004141,3.84e-67,18;UBERON:0003084,3.84e-67,18;UBERON:0007005,3.84e-67,18;UBERON:0004139,3.84e-67,18;UBERON:0004291,3.84e-67,18;UBERON:0004535,2.55e-52,23;UBERON:0001009,2.55e-52,23;UBERON:0004872,3.96e-36,33;UBERON:0003103,1.89e-27,43;UBERON:0003914,5.21e-25,47;UBERON:0003081,6.82e-13,87;UBERON:0010314,4.10e-12,92;UBERON:0000025,1.73e-09,114;UBERON:0000926,6.15e-09,120;UBERON:0004120,6.15e-09,120;UBERON:0006603,6.15e-09,120;UBERON:0004111,9.13e-09,122;UBERON:0001048,7.70e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,1.17263029990548,2.16074473753218,2.13070262026689,4.52557733019029,3.85667782218446,3.0229412817553,1.60964040839772,3.50296027101508,4.27855609775049,3.11918181750281,3.56702762001765,4.09359964790931,3.73235195994786,3.62357330653004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,1.17263029990548,2.16074473753218,2.13070262026689,4.52557733019029,3.85667782218446,3.0229412817553,1.60964040839772,3.50296027101508,4.27855609775049,3.11918181750281,3.56702762001765,4.09359964790931,3.73235195994786,3.62357330653004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@Cacna1c | |||
}} | }} |
Latest revision as of 13:17, 26 September 2015
Short description: | p10@Cacna1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Cacna1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -181bp_to_NM_001255997, NM_001255998, NM_001255999, NM_009781, uc009dlu.2_5end |
EntrezGene: | Cacna1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.84e-67 | 18 |
heart | 3.84e-67 | 18 |
primitive heart tube | 3.84e-67 | 18 |
primary heart field | 3.84e-67 | 18 |
anterior lateral plate mesoderm | 3.84e-67 | 18 |
heart tube | 3.84e-67 | 18 |
heart primordium | 3.84e-67 | 18 |
cardiac mesoderm | 3.84e-67 | 18 |
cardiogenic plate | 3.84e-67 | 18 |
heart rudiment | 3.84e-67 | 18 |
cardiovascular system | 2.55e-52 | 23 |
circulatory system | 2.55e-52 | 23 |
splanchnic layer of lateral plate mesoderm | 3.96e-36 | 33 |
compound organ | 1.89e-27 | 43 |
epithelial tube | 5.21e-25 | 47 |
lateral plate mesoderm | 6.82e-13 | 87 |
structure with developmental contribution from neural crest | 4.10e-12 | 92 |
tube | 1.73e-09 | 114 |
mesoderm | 6.15e-09 | 120 |
mesoderm-derived structure | 6.15e-09 | 120 |
presumptive mesoderm | 6.15e-09 | 120 |
anatomical conduit | 9.13e-09 | 122 |
primordium | 7.70e-08 | 134 |