FFCP PHASE1:Mm9::chr17:48439659..48439668,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328833 | |EntrezGene=328833 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENSMUST00000166699_5end | |association_with_transcript=-11bp_to_ENSMUST00000166699_5end | ||
|cluster_id=chr17:48439659..48439668,+ | |||
|description=CAGE_peak_10_at_Treml2_5end | |description=CAGE_peak_10_at_Treml2_5end | ||
|id=chr17:48439659..48439668,+ | |id=chr17:48439659..48439668,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.87e-12!9;CL:0000789!4.87e-12!9;CL:0002420!4.87e-12!9;CL:0002419!4.87e-12!9;CL:0000790!4.87e-12!9;CL:0000084!2.09e-11!11;CL:0000827!2.09e-11!11;CL:0000624!8.92e-11!8;CL:0000838!3.10e-10!12;CL:0000542!3.01e-09!13;CL:0000051!3.01e-09!13;CL:0000893!5.80e-08!6;CL:0002489!5.80e-08!6;CL:0000898!5.80e-08!6;CL:0000809!5.80e-08!6;CL:0000810!5.80e-08!6;CL:0000895!5.80e-08!6;CL:0000808!5.80e-08!6;CL:0000894!5.80e-08!6;CL:0000806!5.80e-08!6;CL:0000807!5.80e-08!6;CL:0000805!5.80e-08!6;CL:0002425!5.80e-08!6;CL:0002436!5.80e-08!6;CL:0002427!5.80e-08!6;CL:0002428!5.80e-08!6;CL:0002429!5.80e-08!6;CL:0002433!5.80e-08!6;CL:0002431!5.80e-08!6;CL:0002432!5.80e-08!6 | |ontology_enrichment_celltype=CL:0000791!4.87e-12!9;CL:0000789!4.87e-12!9;CL:0002420!4.87e-12!9;CL:0002419!4.87e-12!9;CL:0000790!4.87e-12!9;CL:0000084!2.09e-11!11;CL:0000827!2.09e-11!11;CL:0000624!8.92e-11!8;CL:0000838!3.10e-10!12;CL:0000542!3.01e-09!13;CL:0000051!3.01e-09!13;CL:0000893!5.80e-08!6;CL:0002489!5.80e-08!6;CL:0000898!5.80e-08!6;CL:0000809!5.80e-08!6;CL:0000810!5.80e-08!6;CL:0000895!5.80e-08!6;CL:0000808!5.80e-08!6;CL:0000894!5.80e-08!6;CL:0000806!5.80e-08!6;CL:0000807!5.80e-08!6;CL:0000805!5.80e-08!6;CL:0002425!5.80e-08!6;CL:0002436!5.80e-08!6;CL:0002427!5.80e-08!6;CL:0002428!5.80e-08!6;CL:0002429!5.80e-08!6;CL:0002433!5.80e-08!6;CL:0002431!5.80e-08!6;CL:0002432!5.80e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.98e-16,9;CL:0000789,8.98e-16,9;CL:0002420,8.98e-16,9;CL:0002419,8.98e-16,9;CL:0000790,8.98e-16,9;CL:0000084,6.81e-13,11;CL:0000827,6.81e-13,11;CL:0000624,6.30e-12,8;CL:0000838,8.23e-12,12;CL:0000542,6.79e-11,13;CL:0000051,6.79e-11,13;CL:0000738,2.67e-08,17;CL:0002087,2.67e-08,17;CL:0000815,2.75e-07,1;CL:0000792,2.75e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.06e-17,3;DOID:4045,1.06e-17,3;DOID:0050686,3.98e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.23e-16!29;UBERON:0005057!1.51e-15!51;UBERON:0002370!1.65e-15!23;UBERON:0000974!1.65e-15!23;UBERON:0004807!1.65e-15!23;UBERON:0005058!1.65e-15!23;UBERON:0003351!1.65e-15!23;UBERON:0009113!1.65e-15!23;UBERON:0003295!1.65e-15!23;UBERON:0009722!1.65e-15!23;UBERON:0005562!1.65e-15!23;UBERON:0007690!1.65e-15!23;UBERON:0006562!1.24e-14!24;UBERON:0003408!1.24e-14!24;UBERON:0001557!1.24e-14!24;UBERON:0001042!1.24e-14!24;UBERON:0008814!1.24e-14!24;UBERON:0009145!1.24e-14!24;UBERON:0002405!4.51e-14!70;UBERON:0002193!1.14e-12!48;UBERON:0000072!2.08e-12!27;UBERON:0002390!1.59e-11!45;UBERON:0003061!1.59e-11!45;UBERON:0002368!1.06e-10!60;UBERON:0000490!1.76e-10!66;UBERON:0003929!2.24e-10!55;UBERON:0002530!2.84e-09!65;UBERON:0000065!4.55e-09!41;UBERON:0005911!6.14e-09!69;UBERON:0001004!1.02e-08!42;UBERON:0000063!2.12e-08!35;UBERON:0000949!1.23e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.55e-08,23;UBERON:0000974,2.55e-08,23;UBERON:0004807,2.55e-08,23;UBERON:0005058,2.55e-08,23;UBERON:0003351,2.55e-08,23;UBERON:0009113,2.55e-08,23;UBERON:0003295,2.55e-08,23;UBERON:0009722,2.55e-08,23;UBERON:0005562,2.55e-08,23;UBERON:0007690,2.55e-08,23;UBERON:0006562,5.88e-08,24;UBERON:0003408,5.88e-08,24;UBERON:0001557,5.88e-08,24;UBERON:0001042,5.88e-08,24;UBERON:0008814,5.88e-08,24;UBERON:0009145,5.88e-08,24;UBERON:0000490,3.86e-07,66;UBERON:0000072,5.01e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,6.97265946584512,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,5.13602189793617,6.29426897416781,0,0.809901069559304,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,3.66466620781659,4.1176204162171,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,0.393117990226406,0.899448449539415,0.608580364165509,0.964708639009667,1.01850340712568,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.555583582109135,0,0.410082683163076,0.457556346413045,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,1.26404448251271,0.202725215290164,0,0.129920822977795,0,0.596044064343795,1.56254084375959,0.886137163047463,1.61546319917036,0.609654453239999,0.201652370273681,0.779663045918019,0.673482891482306,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,6.97265946584512,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,5.13602189793617,6.29426897416781,0,0.809901069559304,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,3.66466620781659,4.1176204162171,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,0.393117990226406,0.899448449539415,0.608580364165509,0.964708639009667,1.01850340712568,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.555583582109135,0,0.410082683163076,0.457556346413045,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,1.26404448251271,0.202725215290164,0,0.129920822977795,0,0.596044064343795,1.56254084375959,0.886137163047463,1.61546319917036,0.609654453239999,0.201652370273681,0.779663045918019,0.673482891482306,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p10@Treml2 | |short_description=p10@Treml2 | ||
}} | }} |
Latest revision as of 15:04, 26 September 2015
Short description: | p10@Treml2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Treml2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -11bp_to_ENSMUST00000166699_5end |
EntrezGene: | Treml2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.98e-16 | 9 |
alpha-beta T cell | 8.98e-16 | 9 |
immature T cell | 8.98e-16 | 9 |
mature T cell | 8.98e-16 | 9 |
immature alpha-beta T cell | 8.98e-16 | 9 |
T cell | 6.81e-13 | 11 |
pro-T cell | 6.81e-13 | 11 |
CD4-positive, alpha-beta T cell | 6.30e-12 | 8 |
lymphoid lineage restricted progenitor cell | 8.23e-12 | 12 |
lymphocyte | 6.79e-11 | 13 |
common lymphoid progenitor | 6.79e-11 | 13 |
leukocyte | 2.67e-08 | 17 |
nongranular leukocyte | 2.67e-08 | 17 |
regulatory T cell | 2.75e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.55e-08 | 23 |
neck | 2.55e-08 | 23 |
respiratory system epithelium | 2.55e-08 | 23 |
hemolymphoid system gland | 2.55e-08 | 23 |
pharyngeal epithelium | 2.55e-08 | 23 |
thymic region | 2.55e-08 | 23 |
pharyngeal gland | 2.55e-08 | 23 |
entire pharyngeal arch endoderm | 2.55e-08 | 23 |
thymus primordium | 2.55e-08 | 23 |
early pharyngeal endoderm | 2.55e-08 | 23 |
pharynx | 5.88e-08 | 24 |
gland of gut | 5.88e-08 | 24 |
upper respiratory tract | 5.88e-08 | 24 |
chordate pharynx | 5.88e-08 | 24 |
pharyngeal arch system | 5.88e-08 | 24 |
pharyngeal region of foregut | 5.88e-08 | 24 |
unilaminar epithelium | 3.86e-07 | 66 |
segment of respiratory tract | 5.01e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.06e-17 | 3 |
muscle cancer | 1.06e-17 | 3 |
organ system cancer | 3.98e-09 | 6 |