Personal tools

FFCP PHASE1:Mm9::chr1:16094466..16094473,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19989
|EntrezGene=19989
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-1bp_to_ENSMUST00000125005_5end
|association_with_transcript=-1bp_to_ENSMUST00000125005_5end
|cluster_id=chr1:16094466..16094473,-
|description=CAGE_peak_2_at_Rpl7_5end
|description=CAGE_peak_2_at_Rpl7_5end
|id=chr1:16094466..16094473,-
|id=chr1:16094466..16094473,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,3.72e-24,9;CL:0000789,3.72e-24,9;CL:0002420,3.72e-24,9;CL:0002419,3.72e-24,9;CL:0000790,3.72e-24,9;CL:0000084,1.02e-19,11;CL:0000827,1.02e-19,11;CL:0000624,3.74e-19,8;CL:0000838,4.74e-18,12;CL:0000738,4.59e-17,17;CL:0002087,4.59e-17,17;CL:0000893,6.35e-17,6;CL:0002489,6.35e-17,6;CL:0000898,6.35e-17,6;CL:0000809,6.35e-17,6;CL:0000810,6.35e-17,6;CL:0000895,6.35e-17,6;CL:0000808,6.35e-17,6;CL:0000894,6.35e-17,6;CL:0000806,6.35e-17,6;CL:0000807,6.35e-17,6;CL:0000805,6.35e-17,6;CL:0002425,6.35e-17,6;CL:0002436,6.35e-17,6;CL:0002427,6.35e-17,6;CL:0002428,6.35e-17,6;CL:0002429,6.35e-17,6;CL:0002433,6.35e-17,6;CL:0002431,6.35e-17,6;CL:0002432,6.35e-17,6;CL:0000542,1.22e-16,13;CL:0000051,1.22e-16,13;CL:0002031,8.39e-15,25;CL:0000988,2.20e-11,32;CL:0002032,2.20e-11,32;CL:0000037,2.20e-11,32;CL:0000837,2.20e-11,32;CL:0002320,1.18e-07,46;CL:0000134,1.18e-07,46;CL:0000625,2.43e-07,1;CL:0000815,4.83e-07,1;CL:0000792,4.83e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.18e-07,46;UBERON:0000029,7.23e-07,1;UBERON:0001097,7.23e-07,1;UBERON:0003968,7.23e-07,1;UBERON:0001467,7.23e-07,1
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.16210991097419,3.94208422024667,3.04283884218592,2.05461561870606,1.99430397488341,0.342401459862411,0.437102012094987,0.333109761815663,0.404950534779652,0.699561878128147,0.788655413395594,0.274228867211478,0.42438965179803,0.255129870453209,0.496454756004426,0,0,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0.504060259519861,0,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0,0,0.671130424230945,0,1.34437519656986,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.640413505216868,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0,0.186399445825301,0.227178579999552,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,1.28326477414318,0,0,0,0.506719730950197,0.505524445014783,0.34255163915718,1.03575153458869,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0.628332956648377,0,0,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0.510914110417183,0.239630249011841,0.599902730993408,0.381210681219194,0.149790639404823,0,0.628271760564322,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.180062129805349,0.90422890701429,0.204109497453984,0.2562274405697,0.562210347358373,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.59710280045548,0.702213187313235,0,0.284163499395593,0,0.469052119962192,0,0,0.196764231747404,0.462801338662135,0.232533944750408,1.07309360559848,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.878200461164203,0.402619256281115,0.420579897128254,0.205809224758569,0,0.264450566663544,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0,0,0.658795818896044,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.189709611372772,0.442830443938806,0.470996183524124,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,1.00503754465089,0,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.172684981865896,0.433947175744535,1.50791283939272,0,0,0,0.321101179975584,0.35163505977661,0,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.906970670894253,0.565815239267694,0,0,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0.886701168211368,0.891844088010353,0.329098041204242,0.304464949114599,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.301564624640779,0.238744688006273,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0.679913719975421,0.279902904647316,0.690999869022119,0,0.316335993581135,0.406638934253697,0.540026704109006,0,0.87345025498471,0.539457385539283,0.330613822901344,0,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.516639293910924,0.168956125490778,0.821500670520278,0,0.314578033277133,0.483168241652012,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.129920822977795,0.537080087002444,0,0.360586348559907,0.590758108698309,0.605798699688886,0.228620419965,0.604957110821043,0.38983152295901,0.673482891482306,0.350630706544707,0,0.221985953374065,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0.618105171716683,0,0,0.25347929989024,0,0.468207537349412,0.448176066834085,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.492522411877817,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.16210991097419,3.94208422024667,3.04283884218592,2.05461561870606,1.99430397488341,0.342401459862411,0.437102012094987,0.333109761815663,0.404950534779652,0.699561878128147,0.788655413395594,0.274228867211478,0.42438965179803,0.255129870453209,0.496454756004426,0,0,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0.504060259519861,0,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0,0,0.671130424230945,0,1.34437519656986,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.640413505216868,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0,0.186399445825301,0.227178579999552,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,1.28326477414318,0,0,0,0.506719730950197,0.505524445014783,0.34255163915718,1.03575153458869,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0.628332956648377,0,0,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0.510914110417183,0.239630249011841,0.599902730993408,0.381210681219194,0.149790639404823,0,0.628271760564322,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.180062129805349,0.90422890701429,0.204109497453984,0.2562274405697,0.562210347358373,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.59710280045548,0.702213187313235,0,0.284163499395593,0,0.469052119962192,0,0,0.196764231747404,0.462801338662135,0.232533944750408,1.07309360559848,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.878200461164203,0.402619256281115,0.420579897128254,0.205809224758569,0,0.264450566663544,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0,0,0.658795818896044,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.189709611372772,0.442830443938806,0.470996183524124,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,1.00503754465089,0,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.172684981865896,0.433947175744535,1.50791283939272,0,0,0,0.321101179975584,0.35163505977661,0,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.906970670894253,0.565815239267694,0,0,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0.886701168211368,0.891844088010353,0.329098041204242,0.304464949114599,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.301564624640779,0.238744688006273,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0.679913719975421,0.279902904647316,0.690999869022119,0,0.316335993581135,0.406638934253697,0.540026704109006,0,0.87345025498471,0.539457385539283,0.330613822901344,0,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.516639293910924,0.168956125490778,0.821500670520278,0,0.314578033277133,0.483168241652012,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.129920822977795,0.537080087002444,0,0.360586348559907,0.590758108698309,0.605798699688886,0.228620419965,0.604957110821043,0.38983152295901,0.673482891482306,0.350630706544707,0,0.221985953374065,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0.618105171716683,0,0,0.25347929989024,0,0.468207537349412,0.448176066834085,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.492522411877817,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0
|short_description=p2@Rpl7
|short_description=p2@Rpl7
}}
}}

Latest revision as of 15:23, 26 September 2015

Short description:p2@Rpl7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rpl7_5end
Coexpression cluster:NA
Association with transcript: -1bp_to_ENSMUST00000125005_5end
EntrezGene:Rpl7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rpl7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.72e-249
alpha-beta T cell3.72e-249
immature T cell3.72e-249
mature T cell3.72e-249
immature alpha-beta T cell3.72e-249
T cell1.02e-1911
pro-T cell1.02e-1911
CD4-positive, alpha-beta T cell3.74e-198
lymphoid lineage restricted progenitor cell4.74e-1812
leukocyte4.59e-1717
nongranular leukocyte4.59e-1717
thymocyte6.35e-176
double negative thymocyte6.35e-176
naive T cell6.35e-176
double-positive, alpha-beta thymocyte6.35e-176
CD4-positive, alpha-beta thymocyte6.35e-176
naive thymus-derived CD4-positive, alpha-beta T cell6.35e-176
DN4 thymocyte6.35e-176
DN1 thymic pro-T cell6.35e-176
DN2 thymocyte6.35e-176
DN3 thymocyte6.35e-176
immature single positive thymocyte6.35e-176
early T lineage precursor6.35e-176
mature CD4 single-positive thymocyte6.35e-176
resting double-positive thymocyte6.35e-176
double-positive blast6.35e-176
CD69-positive double-positive thymocyte6.35e-176
CD69-positive, CD4-positive single-positive thymocyte6.35e-176
CD4-positive, CD8-intermediate double-positive thymocyte6.35e-176
CD24-positive, CD4 single-positive thymocyte6.35e-176
lymphocyte1.22e-1613
common lymphoid progenitor1.22e-1613
hematopoietic lineage restricted progenitor cell8.39e-1525
hematopoietic cell2.20e-1132
hematopoietic oligopotent progenitor cell2.20e-1132
hematopoietic stem cell2.20e-1132
hematopoietic multipotent progenitor cell2.20e-1132
connective tissue cell1.18e-0746
mesenchymal cell1.18e-0746
CD8-positive, alpha-beta T cell2.43e-071
regulatory T cell4.83e-071
CD4-positive, CD25-positive, alpha-beta regulatory T cell4.83e-071

Uber anatomy
Ontology termp-valuen
connective tissue1.18e-0746
lymph node7.23e-071
axillary lymph node7.23e-071
peripheral lymph node7.23e-071
shoulder7.23e-071
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:16094466..16094473,-&oldid=4260504"