FFCP PHASE1:Mm9::chr12:50483639..50483654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15228 | |EntrezGene=15228 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENSMUST00000135006_5end | |association_with_transcript=-25bp_to_ENSMUST00000135006_5end | ||
|cluster_id=chr12:50483639..50483654,+ | |||
|description=CAGE_peak_1_at_Foxg1_5end | |description=CAGE_peak_1_at_Foxg1_5end | ||
|id=chr12:50483639..50483654,+ | |id=chr12:50483639..50483654,+ | ||
|ontology_enrichment_celltype=CL:0002609!1.11e-07!6 | |ontology_enrichment_celltype=CL:0002609!1.11e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.77e-11,6;CL:0002453,8.39e-09,8;CL:0000333,8.88e-07,10;CL:0000095,8.88e-07,10;CL:0000243,8.88e-07,10;CL:0000123,8.88e-07,10;CL:0000125,8.88e-07,10;CL:0000030,8.88e-07,10;CL:0000339,8.88e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!3.25e-22!29;UBERON:0003528!3.25e-22!29;UBERON:0001893!3.25e-22!29;UBERON:0000956!3.46e-21!21;UBERON:0001869!3.46e-21!21;UBERON:0000203!3.46e-21!21;UBERON:0002780!2.90e-18!39;UBERON:0001890!2.90e-18!39;UBERON:0006240!2.90e-18!39;UBERON:0003080!1.69e-17!40;UBERON:0002020!2.83e-17!34;UBERON:0002619!3.87e-17!17;UBERON:0007811!9.28e-17!86;UBERON:0000955!6.48e-16!50;UBERON:0006238!6.48e-16!50;UBERON:0003056!2.92e-15!49;UBERON:0002616!3.94e-15!49;UBERON:0000033!1.84e-14!63;UBERON:0000153!8.45e-14!94;UBERON:0001017!3.33e-12!73;UBERON:0005743!3.33e-12!73;UBERON:0001049!6.11e-12!52;UBERON:0005068!6.11e-12!52;UBERON:0006241!6.11e-12!52;UBERON:0007135!6.11e-12!52;UBERON:0000073!1.69e-11!75;UBERON:0001016!1.69e-11!75;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0001954!3.10e-08!7;UBERON:0003022!3.10e-08!7;UBERON:0002421!3.10e-08!7;UBERON:0000349!3.10e-08!7;UBERON:0002600!3.10e-08!7;UBERON:0002346!3.23e-08!71;UBERON:0003075!3.23e-08!71;UBERON:0007284!3.23e-08!71;UBERON:0004121!1.54e-07!102;UBERON:0000924!1.54e-07!102;UBERON:0006601!1.54e-07!102;UBERON:0000064!7.16e-07!99 | |ontology_enrichment_uberon=UBERON:0002791!3.25e-22!29;UBERON:0003528!3.25e-22!29;UBERON:0001893!3.25e-22!29;UBERON:0000956!3.46e-21!21;UBERON:0001869!3.46e-21!21;UBERON:0000203!3.46e-21!21;UBERON:0002780!2.90e-18!39;UBERON:0001890!2.90e-18!39;UBERON:0006240!2.90e-18!39;UBERON:0003080!1.69e-17!40;UBERON:0002020!2.83e-17!34;UBERON:0002619!3.87e-17!17;UBERON:0007811!9.28e-17!86;UBERON:0000955!6.48e-16!50;UBERON:0006238!6.48e-16!50;UBERON:0003056!2.92e-15!49;UBERON:0002616!3.94e-15!49;UBERON:0000033!1.84e-14!63;UBERON:0000153!8.45e-14!94;UBERON:0001017!3.33e-12!73;UBERON:0005743!3.33e-12!73;UBERON:0001049!6.11e-12!52;UBERON:0005068!6.11e-12!52;UBERON:0006241!6.11e-12!52;UBERON:0007135!6.11e-12!52;UBERON:0000073!1.69e-11!75;UBERON:0001016!1.69e-11!75;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0001954!3.10e-08!7;UBERON:0003022!3.10e-08!7;UBERON:0002421!3.10e-08!7;UBERON:0000349!3.10e-08!7;UBERON:0002600!3.10e-08!7;UBERON:0002346!3.23e-08!71;UBERON:0003075!3.23e-08!71;UBERON:0007284!3.23e-08!71;UBERON:0004121!1.54e-07!102;UBERON:0000924!1.54e-07!102;UBERON:0006601!1.54e-07!102;UBERON:0000064!7.16e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.48e-32,21;UBERON:0001869,2.48e-32,21;UBERON:0000203,2.48e-32,21;UBERON:0003528,6.25e-29,29;UBERON:0002791,6.25e-29,29;UBERON:0001893,6.25e-29,29;UBERON:0002619,5.72e-26,17;UBERON:0002020,1.57e-23,34;UBERON:0002780,2.42e-21,39;UBERON:0001890,2.42e-21,39;UBERON:0006240,2.42e-21,39;UBERON:0003080,1.31e-20,40;UBERON:0000955,8.13e-20,47;UBERON:0006238,8.13e-20,47;UBERON:0002616,1.17e-18,46;UBERON:0001049,1.41e-15,52;UBERON:0005068,1.41e-15,52;UBERON:0006241,1.41e-15,52;UBERON:0007135,1.41e-15,52;UBERON:0003056,2.14e-15,49;UBERON:0002021,2.78e-15,10;UBERON:0000411,2.78e-15,10;UBERON:0001950,2.78e-15,10;UBERON:0000073,1.05e-14,54;UBERON:0001017,6.83e-14,73;UBERON:0001016,2.79e-13,75;UBERON:0001954,5.18e-12,7;UBERON:0003022,5.18e-12,7;UBERON:0002421,5.18e-12,7;UBERON:0000349,5.18e-12,7;UBERON:0002600,5.18e-12,7;UBERON:0002346,3.36e-11,64;UBERON:0003075,3.36e-11,64;UBERON:0007284,3.36e-11,64;UBERON:0010371,9.61e-10,73;UBERON:0004121,2.14e-09,95;UBERON:0000924,2.14e-09,95;UBERON:0006601,2.14e-09,95 | |||
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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.21652317463417,0.550640256485045,0,8.06693078607652,6.81027166476863,9.52706505463989,1.67983705950435,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,2.03306719241479,1.77858959222228,0,0,0,1.49800055259202,3.07374644257244,38.2614669418283,45.0919834027847,41.4340173862223,0,0,24.3756690437759,21.5652309791032,30.3342199581307,0,0.510749352340751,0.153606533256243,0.923204014111357,0.274462930807229,2.08365348222704,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,1.36344258062446,1.29893002301434,0.35333957451034,1.40843419776681,0,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,4.11750542536764,16.2094114225595,2.78118912307642,2.55715457330331,0.83115217823824,2.10913641988085,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,11.216602749342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95082901678016,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,2.22997736819181,2.15693010046137,1.16928740680016,0.895133478337407,0.993406773906324,0.360586348559907,0.443068581523732,0.201932899896295,0.15241361331,0.302478555410522,0.487289403698762,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,3.95326289831947,4.60325236507177,5.15605962095457,3.43706364687375,5.48066015816514,3.7769694869485,4.72515750162264,6.30449684513909,3.62513927187364,5.69536342927002,0.415149390336707,1.19707462020309,1.19513524027894,1.70174701947806,1.04806581313991,1.2869045591501,1.11123363900808,1.03017528619447,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,0.561849044819294,0.832326981263301,1.37845125493472,0.952587382566147,1.97003354106254,1.15745532278223,0.412085900803307,1.17759136107518,1.02860775715625,0.70990322463735,1.43061713968393,1.0174249164263,1.69396884747595,0.592302255241736,0.548783918618318,2.36762740294059,0.814824683075171,1.68342681497322,0.355905054372522,0.985044823755635,0,1.08455788830176,0.771626443924566,4.99621155875892,0.701794825336225,1.50409737833809,0,0,0 | ||
|short_description=p1@Foxg1 | |short_description=p1@Foxg1 | ||
}} | }} |
Latest revision as of 15:34, 26 September 2015
Short description: | p1@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -25bp_to_ENSMUST00000135006_5end |
EntrezGene: | Foxg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.77e-11 | 6 |
oligodendrocyte precursor cell | 8.39e-09 | 8 |
migratory neural crest cell | 8.88e-07 | 10 |
neuron associated cell | 8.88e-07 | 10 |
glial cell (sensu Vertebrata) | 8.88e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.88e-07 | 10 |
glial cell | 8.88e-07 | 10 |
glioblast | 8.88e-07 | 10 |
glioblast (sensu Vertebrata) | 8.88e-07 | 10 |