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FFCP PHASE1:Mm9::chr2:4073661..4073690,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=209630
|EntrezGene=209630
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8BIE6
|UniProt=Q8BIE6
|association_with_transcript=-218bp_to_NM_172475,uc008ien.2,uc008ieo.2_5end
|association_with_transcript=-218bp_to_NM_172475,uc008ien.2,uc008ieo.2_5end
|cluster_id=chr2:4073661..4073690,+
|description=CAGE_peak_20_at_Frmd4a_5end
|description=CAGE_peak_20_at_Frmd4a_5end
|id=chr2:4073661..4073690,+
|id=chr2:4073661..4073690,+
|ontology_enrichment_celltype=CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23;CL:0000540!4.39e-11!33;CL:0000047!4.39e-11!33;CL:0000031!4.39e-11!33;CL:0000404!4.39e-11!33;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39
|ontology_enrichment_celltype=CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23;CL:0000540!4.39e-11!33;CL:0000047!4.39e-11!33;CL:0000031!4.39e-11!33;CL:0000404!4.39e-11!33;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,9.32e-26,23;CL:0000337,9.32e-26,23;CL:0000540,8.73e-17,33;CL:0000047,8.73e-17,33;CL:0000031,8.73e-17,33;CL:0000404,8.73e-17,33;CL:0002609,1.72e-14,6;CL:0000393,1.28e-13,39;CL:0000211,1.28e-13,39;CL:0002319,5.31e-12,43;CL:0000221,1.21e-11,44;CL:0000133,1.21e-11,44;CL:0002613,2.97e-09,3;CL:0000120,9.79e-09,3;CL:0002612,9.79e-09,3;CL:0002608,3.47e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.69e-16!71;UBERON:0003075!1.69e-16!71;UBERON:0007284!1.69e-16!71;UBERON:0000033!2.95e-15!63;UBERON:0003056!1.10e-14!49;UBERON:0001049!1.81e-13!52;UBERON:0005068!1.81e-13!52;UBERON:0006241!1.81e-13!52;UBERON:0007135!1.81e-13!52;UBERON:0000153!4.72e-13!94;UBERON:0004121!5.62e-13!102;UBERON:0000924!5.62e-13!102;UBERON:0006601!5.62e-13!102;UBERON:0001017!1.26e-12!73;UBERON:0005743!1.26e-12!73;UBERON:0007811!1.44e-12!86;UBERON:0000073!7.77e-12!75;UBERON:0001016!7.77e-12!75;UBERON:0000955!1.00e-10!50;UBERON:0006238!1.00e-10!50;UBERON:0002616!2.05e-10!49;UBERON:0002020!2.52e-10!34;UBERON:0003080!1.50e-09!40;UBERON:0002780!3.53e-09!39;UBERON:0001890!3.53e-09!39;UBERON:0006240!3.53e-09!39;UBERON:0002791!3.08e-07!29;UBERON:0003528!3.08e-07!29;UBERON:0001893!3.08e-07!29;UBERON:0000970!5.48e-07!9;UBERON:0000019!5.48e-07!9;UBERON:0000047!5.48e-07!9;UBERON:0004088!5.48e-07!9;UBERON:0002104!5.48e-07!9;UBERON:0001456!5.48e-07!9;UBERON:0003072!5.48e-07!9;UBERON:0003071!5.48e-07!9;UBERON:0004128!5.48e-07!9
|ontology_enrichment_uberon=UBERON:0002346!1.69e-16!71;UBERON:0003075!1.69e-16!71;UBERON:0007284!1.69e-16!71;UBERON:0000033!2.95e-15!63;UBERON:0003056!1.10e-14!49;UBERON:0001049!1.81e-13!52;UBERON:0005068!1.81e-13!52;UBERON:0006241!1.81e-13!52;UBERON:0007135!1.81e-13!52;UBERON:0000153!4.72e-13!94;UBERON:0004121!5.62e-13!102;UBERON:0000924!5.62e-13!102;UBERON:0006601!5.62e-13!102;UBERON:0001017!1.26e-12!73;UBERON:0005743!1.26e-12!73;UBERON:0007811!1.44e-12!86;UBERON:0000073!7.77e-12!75;UBERON:0001016!7.77e-12!75;UBERON:0000955!1.00e-10!50;UBERON:0006238!1.00e-10!50;UBERON:0002616!2.05e-10!49;UBERON:0002020!2.52e-10!34;UBERON:0003080!1.50e-09!40;UBERON:0002780!3.53e-09!39;UBERON:0001890!3.53e-09!39;UBERON:0006240!3.53e-09!39;UBERON:0002791!3.08e-07!29;UBERON:0003528!3.08e-07!29;UBERON:0001893!3.08e-07!29;UBERON:0000970!5.48e-07!9;UBERON:0000019!5.48e-07!9;UBERON:0000047!5.48e-07!9;UBERON:0004088!5.48e-07!9;UBERON:0002104!5.48e-07!9;UBERON:0001456!5.48e-07!9;UBERON:0003072!5.48e-07!9;UBERON:0003071!5.48e-07!9;UBERON:0004128!5.48e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.44e-16,34;UBERON:0002346,1.00e-14,64;UBERON:0003075,1.00e-14,64;UBERON:0007284,1.00e-14,64;UBERON:0003056,3.85e-13,49;UBERON:0010371,2.86e-12,73;UBERON:0004121,1.21e-11,95;UBERON:0000924,1.21e-11,95;UBERON:0006601,1.21e-11,95;UBERON:0003528,1.39e-10,29;UBERON:0002791,1.39e-10,29;UBERON:0001893,1.39e-10,29;UBERON:0000970,1.07e-09,9;UBERON:0000019,1.07e-09,9;UBERON:0000047,1.07e-09,9;UBERON:0010312,1.07e-09,9;UBERON:0004088,1.07e-09,9;UBERON:0002104,1.07e-09,9;UBERON:0001456,1.07e-09,9;UBERON:0003072,1.07e-09,9;UBERON:0004128,1.07e-09,9;UBERON:0003071,1.07e-09,9;UBERON:0000369,2.43e-09,5;UBERON:0002435,2.43e-09,5;UBERON:0000204,2.43e-09,5;UBERON:0010082,2.43e-09,5;UBERON:0001049,2.72e-09,52;UBERON:0005068,2.72e-09,52;UBERON:0006241,2.72e-09,52;UBERON:0007135,2.72e-09,52;UBERON:0000073,8.21e-09,54;UBERON:0002257,9.79e-09,3;UBERON:0010314,1.10e-08,92;UBERON:0001017,1.15e-08,73;UBERON:0001948,1.68e-08,5;UBERON:0002315,1.68e-08,5;UBERON:0001016,2.56e-08,75;UBERON:0001444,8.37e-08,11;UBERON:0002780,3.29e-07,39;UBERON:0001890,3.29e-07,39;UBERON:0006240,3.29e-07,39;UBERON:0000020,4.30e-07,12;UBERON:0001032,4.30e-07,12;UBERON:0004456,4.30e-07,12;UBERON:0002240,4.47e-07,6;UBERON:0005174,4.47e-07,6;UBERON:0001137,4.47e-07,6;UBERON:0003080,5.76e-07,40
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,2.59224030771194,2.29510095163874,1.47227472945967,0.571301968807607,1.32521124570968,1.95985278743926,3.54628242767475,2.75765635983006,0,0.383062014255563,0.46081959976873,5.80299666012853,6.67859798297591,8.33461392890816,0.279182999001381,0.56276261003168,0.15279824777681,2.94628585473668,4.6982654663704,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0,4.77486538028885,0.347648640384553,0.767146371990992,0.62336413367868,0.811206315338788,0.305518091550949,0,0,0.210441855886474,1.56144531555244,1.37941262660084,0.900310649026746,3.31550599238573,4.49040894398764,3.58718416797579,4.2165776051878,0.258703370739016,0,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,9.2614151141356,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,0,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,2.02506750069542,0,0.906284817968409,0,0.415149390336707,1.19707462020309,1.19513524027894,0.972426868273176,0,0.551530525350042,0,1.03017528619447,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.936415074698824,1.15245274328765,0.976402972245426,0,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,1.90748951957857,1.30811774969096,0.376437521661322,0.930760686808441,1.28049581010941,1.57841826862706,1.22223702461276,2.24456908663095,0.830445126869219,0.788035859004508,1.22769312950907,1.39443157067369,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0,0.220591419119515,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,2.59224030771194,2.29510095163874,1.47227472945967,0.571301968807607,1.32521124570968,1.95985278743926,3.54628242767475,2.75765635983006,0,0.383062014255563,0.46081959976873,5.80299666012853,6.67859798297591,8.33461392890816,0.279182999001381,0.56276261003168,0.15279824777681,2.94628585473668,4.6982654663704,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0,4.77486538028885,0.347648640384553,0.767146371990992,0.62336413367868,0.811206315338788,0.305518091550949,0,0,0.210441855886474,1.56144531555244,1.37941262660084,0.900310649026746,3.31550599238573,4.49040894398764,3.58718416797579,4.2165776051878,0.258703370739016,0,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,9.2614151141356,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,0,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,2.02506750069542,0,0.906284817968409,0,0.415149390336707,1.19707462020309,1.19513524027894,0.972426868273176,0,0.551530525350042,0,1.03017528619447,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.936415074698824,1.15245274328765,0.976402972245426,0,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,1.90748951957857,1.30811774969096,0.376437521661322,0.930760686808441,1.28049581010941,1.57841826862706,1.22223702461276,2.24456908663095,0.830445126869219,0.788035859004508,1.22769312950907,1.39443157067369,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0,0.220591419119515,0
|short_description=p20@Frmd4a
|short_description=p20@Frmd4a
}}
}}

Latest revision as of 17:00, 26 September 2015

Short description:p20@Frmd4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_20_at_Frmd4a_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -218bp_to_NM_172475, uc008ien.2, uc008ieo.2_5end
EntrezGene:Frmd4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p20@Frmd4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter3.44e-1634
neurectoderm1.00e-1464
neural plate1.00e-1464
presumptive neural plate1.00e-1464
pre-chordal neural plate3.85e-1349
ecto-epithelium2.86e-1273
ectoderm-derived structure1.21e-1195
ectoderm1.21e-1195
presumptive ectoderm1.21e-1195
brain grey matter1.39e-1029
regional part of telencephalon1.39e-1029
telencephalon1.39e-1029
eye1.07e-099
camera-type eye1.07e-099
simple eye1.07e-099
immature eye1.07e-099
ocular region1.07e-099
visual system1.07e-099
face1.07e-099
optic cup1.07e-099
optic vesicle1.07e-099
eye primordium1.07e-099
corpus striatum2.43e-095
striatum2.43e-095
ventral part of telencephalon2.43e-095
future corpus striatum2.43e-095
neural tube2.72e-0952
neural rod2.72e-0952
future spinal cord2.72e-0952
neural keel2.72e-0952
regional part of nervous system8.21e-0954
ventral horn of spinal cord9.79e-093
structure with developmental contribution from neural crest1.10e-0892
central nervous system1.15e-0873
regional part of spinal cord1.68e-085
gray matter of spinal cord1.68e-085
nervous system2.56e-0875
subdivision of head8.37e-0811
regional part of forebrain3.29e-0739
forebrain3.29e-0739
future forebrain3.29e-0739
sense organ4.30e-0712
sensory system4.30e-0712
entire sense organ system4.30e-0712
spinal cord4.47e-076
dorsal region element4.47e-076
dorsum4.47e-076
anterior neural tube5.76e-0740
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