FFCP PHASE1:Mm9::chr12:60232412..60232456,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:60232412..60232456,+
|short_description=p2@Ctage5
|description=CAGE_peak_2_at_Ctage5_5end
|association_with_transcript=0bp_to_ENSMUST00000170992,NM_001165...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217615 | |EntrezGene=217615 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1066 | |||
|TSSclassifier=NA | |||
|UniProt=E9PY90 | |UniProt=E9PY90 | ||
|association_with_transcript=0bp_to_ENSMUST00000170992,NM_001165253,uc007nqh.1,uc007nqi.2_5end | |||
|cluster_id=chr12:60232412..60232456,+ | |||
|description=CAGE_peak_2_at_Ctage5_5end | |||
|id=chr12:60232412..60232456,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.57e-11!32;CL:0002032!2.57e-11!32;CL:0000037!2.57e-11!32;CL:0000566!2.57e-11!32;CL:0000837!2.57e-11!32;CL:0002031!9.63e-09!25;CL:0000838!1.40e-08!12;CL:0000084!5.77e-08!11;CL:0000827!5.77e-08!11;CL:0000542!8.48e-08!13;CL:0000051!8.48e-08!13;CL:0000791!1.47e-07!9;CL:0000789!1.47e-07!9;CL:0002420!1.47e-07!9;CL:0002419!1.47e-07!9;CL:0000790!1.47e-07!9;CL:0000624!6.68e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.57e-11,32;CL:0002032,2.57e-11,32;CL:0000037,2.57e-11,32;CL:0000837,2.57e-11,32;CL:0002031,9.63e-09,25;CL:0000838,1.40e-08,12;CL:0000084,5.77e-08,11;CL:0000827,5.77e-08,11;CL:0000542,8.48e-08,13;CL:0000051,8.48e-08,13;CL:0000791,1.47e-07,9;CL:0000789,1.47e-07,9;CL:0002420,1.47e-07,9;CL:0002419,1.47e-07,9;CL:0000790,1.47e-07,9;CL:0000624,6.68e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.84e-15!48;UBERON:0002390!1.49e-13!45;UBERON:0003061!1.49e-13!45;UBERON:0004177!2.90e-11!29;UBERON:0003408!8.40e-11!24;UBERON:0002370!1.50e-10!23;UBERON:0000974!1.50e-10!23;UBERON:0004807!1.50e-10!23;UBERON:0005058!1.50e-10!23;UBERON:0003351!1.50e-10!23;UBERON:0009113!1.50e-10!23;UBERON:0003295!1.50e-10!23;UBERON:0009722!1.50e-10!23;UBERON:0005562!1.50e-10!23;UBERON:0007690!1.50e-10!23;UBERON:0006562!1.49e-09!24;UBERON:0001557!1.49e-09!24;UBERON:0001042!1.49e-09!24;UBERON:0008814!1.49e-09!24;UBERON:0009145!1.49e-09!24;UBERON:0000072!2.42e-09!27;UBERON:0002405!5.45e-08!70;UBERON:0001004!6.37e-08!42;UBERON:0000065!1.16e-07!41;UBERON:0000064!6.28e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.84e-15,48;UBERON:0002405,6.84e-15,48;UBERON:0002390,1.49e-13,45;UBERON:0003061,1.49e-13,45;UBERON:0000077,3.32e-12,35;UBERON:0004177,2.90e-11,29;UBERON:0005057,2.90e-11,29;UBERON:0003408,8.40e-11,24;UBERON:0002370,1.50e-10,23;UBERON:0000974,1.50e-10,23;UBERON:0004807,1.50e-10,23;UBERON:0005058,1.50e-10,23;UBERON:0003351,1.50e-10,23;UBERON:0009113,1.50e-10,23;UBERON:0003295,1.50e-10,23;UBERON:0009722,1.50e-10,23;UBERON:0005562,1.50e-10,23;UBERON:0007690,1.50e-10,23;UBERON:0006562,1.49e-09,24;UBERON:0001557,1.49e-09,24;UBERON:0001042,1.49e-09,24;UBERON:0008814,1.49e-09,24;UBERON:0009145,1.49e-09,24;UBERON:0000072,2.42e-09,27;UBERON:0001004,6.37e-08,42;UBERON:0000065,1.16e-07,41 | |||
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| ||
|short_description=p2@Ctage5 | |||
}} | }} |
Latest revision as of 17:08, 26 September 2015
Short description: | p2@Ctage5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctage5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1066 |
Association with transcript: | 0bp_to_ENSMUST00000170992, NM_001165253, uc007nqh.1, uc007nqi.2_5end |
EntrezGene: | Ctage5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.57e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.57e-11 | 32 |
hematopoietic stem cell | 2.57e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.57e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 9.63e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.40e-08 | 12 |
T cell | 5.77e-08 | 11 |
pro-T cell | 5.77e-08 | 11 |
lymphocyte | 8.48e-08 | 13 |
common lymphoid progenitor | 8.48e-08 | 13 |
mature alpha-beta T cell | 1.47e-07 | 9 |
alpha-beta T cell | 1.47e-07 | 9 |
immature T cell | 1.47e-07 | 9 |
mature T cell | 1.47e-07 | 9 |
immature alpha-beta T cell | 1.47e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.68e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.84e-15 | 48 |
immune system | 6.84e-15 | 48 |
hematopoietic system | 1.49e-13 | 45 |
blood island | 1.49e-13 | 45 |
mixed endoderm/mesoderm-derived structure | 3.32e-12 | 35 |
hemopoietic organ | 2.90e-11 | 29 |
immune organ | 2.90e-11 | 29 |
gland of gut | 8.40e-11 | 24 |
thymus | 1.50e-10 | 23 |
neck | 1.50e-10 | 23 |
respiratory system epithelium | 1.50e-10 | 23 |
hemolymphoid system gland | 1.50e-10 | 23 |
pharyngeal epithelium | 1.50e-10 | 23 |
thymic region | 1.50e-10 | 23 |
pharyngeal gland | 1.50e-10 | 23 |
entire pharyngeal arch endoderm | 1.50e-10 | 23 |
thymus primordium | 1.50e-10 | 23 |
early pharyngeal endoderm | 1.50e-10 | 23 |
pharynx | 1.49e-09 | 24 |
upper respiratory tract | 1.49e-09 | 24 |
chordate pharynx | 1.49e-09 | 24 |
pharyngeal arch system | 1.49e-09 | 24 |
pharyngeal region of foregut | 1.49e-09 | 24 |
segment of respiratory tract | 2.42e-09 | 27 |
respiratory system | 6.37e-08 | 42 |
respiratory tract | 1.16e-07 | 41 |