FFCP PHASE1:Mm9::chr15:31460731..31460747,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:31460731..31460747,- to FFCP PHASE1:Mm9::chr15:31460731..31460747,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223455 | |EntrezGene=223455 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6ZQ89 | |UniProt=Q6ZQ89 | ||
|association_with_transcript=44bp_to_ENSMUST00000090227,NM_172606,uc007vkh.1_5end | |||
|cluster_id=chr15:31460731..31460747,- | |||
|description=CAGE_peak_2_at_March6_5end | |||
|id=chr15:31460731..31460747,- | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-07,23;CL:0000337,1.29e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.62e-10!71;UBERON:0003075!7.62e-10!71;UBERON:0007284!7.62e-10!71;UBERON:0000033!1.19e-09!63;UBERON:0007811!1.51e-09!86;UBERON:0002020!3.72e-09!34;UBERON:0000955!4.80e-09!50;UBERON:0006238!4.80e-09!50;UBERON:0001049!6.95e-09!52;UBERON:0005068!6.95e-09!52;UBERON:0006241!6.95e-09!52;UBERON:0007135!6.95e-09!52;UBERON:0002616!7.77e-09!49;UBERON:0003056!1.00e-08!49;UBERON:0001017!1.04e-08!73;UBERON:0005743!1.04e-08!73;UBERON:0004121!3.40e-08!102;UBERON:0000924!3.40e-08!102;UBERON:0006601!3.40e-08!102;UBERON:0000073!4.57e-08!75;UBERON:0001016!4.57e-08!75;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29;UBERON:0003080!5.49e-08!40;UBERON:0002780!6.53e-08!39;UBERON:0001890!6.53e-08!39;UBERON:0006240!6.53e-08!39;UBERON:0000153!9.69e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.99e-10,54;UBERON:0002020,3.72e-09,34;UBERON:0001049,6.94e-09,52;UBERON:0005068,6.94e-09,52;UBERON:0006241,6.94e-09,52;UBERON:0007135,6.94e-09,52;UBERON:0011216,8.03e-09,194;UBERON:0003056,9.99e-09,49;UBERON:0001017,1.00e-08,73;UBERON:0002346,2.59e-08,64;UBERON:0003075,2.59e-08,64;UBERON:0007284,2.59e-08,64;UBERON:0000955,3.24e-08,47;UBERON:0006238,3.24e-08,47;UBERON:0001016,4.42e-08,75;UBERON:0002616,5.19e-08,46;UBERON:0003528,5.25e-08,29;UBERON:0002791,5.25e-08,29;UBERON:0001893,5.25e-08,29;UBERON:0003080,5.48e-08,40;UBERON:0002780,6.52e-08,39;UBERON:0001890,6.52e-08,39;UBERON:0006240,6.52e-08,39;UBERON:0004121,8.30e-07,95;UBERON:0000924,8.30e-07,95;UBERON:0006601,8.30e-07,95 | |||
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| 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| ||
|short_description=p2@March6 | |||
}} | }} |
Latest revision as of 17:11, 26 September 2015
Short description: | p2@March6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_March6_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENSMUST00000090227, NM_172606, uc007vkh.1_5end |
EntrezGene: | March6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.99e-10 | 54 |
gray matter | 3.72e-09 | 34 |
neural tube | 6.94e-09 | 52 |
neural rod | 6.94e-09 | 52 |
future spinal cord | 6.94e-09 | 52 |
neural keel | 6.94e-09 | 52 |
organ system subdivision | 8.03e-09 | 194 |
pre-chordal neural plate | 9.99e-09 | 49 |
central nervous system | 1.00e-08 | 73 |
neurectoderm | 2.59e-08 | 64 |
neural plate | 2.59e-08 | 64 |
presumptive neural plate | 2.59e-08 | 64 |
brain | 3.24e-08 | 47 |
future brain | 3.24e-08 | 47 |
nervous system | 4.42e-08 | 75 |
regional part of brain | 5.19e-08 | 46 |
brain grey matter | 5.25e-08 | 29 |
regional part of telencephalon | 5.25e-08 | 29 |
telencephalon | 5.25e-08 | 29 |
anterior neural tube | 5.48e-08 | 40 |
regional part of forebrain | 6.52e-08 | 39 |
forebrain | 6.52e-08 | 39 |
future forebrain | 6.52e-08 | 39 |
ectoderm-derived structure | 8.30e-07 | 95 |
ectoderm | 8.30e-07 | 95 |
presumptive ectoderm | 8.30e-07 | 95 |