FFCP PHASE1:Mm9::chr17:56752815..56752848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100043718,100504319,54217,637553 | |EntrezGene=100043718,100504319,54217,637553 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZWZ4,D3Z7M8 | |UniProt=Q6ZWZ4,D3Z7M8 | ||
|association_with_transcript=0bp_to_ENSMUST00000080492,NM_018730,uc008dcn.2_5end | |association_with_transcript=0bp_to_ENSMUST00000080492,NM_018730,uc008dcn.2_5end | ||
|cluster_id=chr17:56752815..56752848,+ | |||
|description=CAGE_peak_2_at_Gm13611_5end,CAGE_peak_2_at_Gm4604_5end,CAGE_peak_2_at_LOC637553_5end,CAGE_peak_2_at_Rpl36_5end | |description=CAGE_peak_2_at_Gm13611_5end,CAGE_peak_2_at_Gm4604_5end,CAGE_peak_2_at_LOC637553_5end,CAGE_peak_2_at_Rpl36_5end | ||
|id=chr17:56752815..56752848,+ | |id=chr17:56752815..56752848,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.47e-09!32;CL:0002032!1.47e-09!32;CL:0000037!1.47e-09!32;CL:0000566!1.47e-09!32;CL:0000837!1.47e-09!32;CL:0000542!9.20e-09!13;CL:0000051!9.20e-09!13;CL:0000838!1.51e-08!12;CL:0000084!6.90e-08!11;CL:0000827!6.90e-08!11;CL:0000791!2.08e-07!9;CL:0000789!2.08e-07!9;CL:0002420!2.08e-07!9;CL:0002419!2.08e-07!9;CL:0000790!2.08e-07!9;CL:0002031!3.17e-07!25;CL:0000738!4.95e-07!17;CL:0002087!4.95e-07!17;CL:0000624!9.63e-07!8;CL:0000034!9.96e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.46e-09,32;CL:0002032,1.46e-09,32;CL:0000037,1.46e-09,32;CL:0000837,1.46e-09,32;CL:0000542,9.20e-09,13;CL:0000051,9.20e-09,13;CL:0000838,1.51e-08,12;CL:0000084,6.90e-08,11;CL:0000827,6.90e-08,11;CL:0000791,2.08e-07,9;CL:0000789,2.08e-07,9;CL:0002420,2.08e-07,9;CL:0002419,2.08e-07,9;CL:0000790,2.08e-07,9;CL:0002031,3.16e-07,25;CL:0000738,4.95e-07,17;CL:0002087,4.95e-07,17;CL:0000624,9.63e-07,8;CL:0000034,9.90e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=8.64803774365887,2.44282785347553,2.27499619694768,1.20985684522732,2.00358291978539,4.19698179779725,3.50418960893289,17.4316486646128,33.6485045942484,38.3865823168069,17.1217968225505,25.7664073554937,12.1552518251156,17.6589212886375,6.32908547449759,4.04950534779652,10.4934281719222,6.15151222448563,6.17014951225825,3.39511721438424,5.10259740906419,9.53193131528499,5.48519557191764,3.03985603307473,3.44113921600755,4.01962374880514,1.7230479846363,3.878482188346,3.23039813075836,4.78857246543868,10.4213340007993,26.0362576118449,31.3683041668131,0,13.8648777480612,8.14549762256613,12.8626694445293,6.69650609179052,4.6880120671428,5.23523743973798,3.52938892818609,2.04913645487534,5.82612423637384,6.16894408080329,5.37297735463427,5.87349606917381,10.9534788208725,3.92445281484804,4.61340983742391,3.30530828426282,4.19959264876088,1.43752564364972,23.4895648480831,15.2326049822382,25.5431287348273,3.8588915405392,2.0057340795713,5.15672092277442,5.05791152148994,4.7609188134483,5.70448263155561,10.5041804941431,1.77858959222228,4.49949858640699,2.96659908770092,7.104801149461,5.99200221036809,6.91592949578798,5.39185984004084,6.88530285491622,3.78584930432488,7.14127461009509,4.8591079009355,2.57230678351403,3.83381884072945,4.5960939330501,4.40463523997555,2.93680877595932,2.61131106535614,3.82470234417562,5.03182039813253,2.08365348222704,4.4669279840221,4.50210088025344,2.75036845998258,2.65165726926301,2.98980529678116,4.47358669980721,8.63278603998298,4.08086424576642,6.08715426273523,3.44169550792555,3.39985666853875,0,4.54843492213368,4.03224198387602,2.52799956237153,3.2381761289831,5.71529210126311,3.88673531961374,6.61964072950398,2.56652954828636,2.54805239706646,0,7.79367747640371,9.62767488805375,7.58286667522175,3.9964357901671,2.84831672011889,1.92974780784272,7.45986905094384,4.87144765299426,5.07354093963329,6.48107354376277,5.05631440683531,3.89566433121994,3.21353458054686,3.32578520915797,3.5384422077995,3.39710384889559,4.63767188766826,2.90925151881133,1.86391761218122,2.04946557908083,4.1889341362691,3.32094171771169,9.22576458695586,8.99854096490112,10.4197586199913,3.44518470631092,3.20250421973039,5.78010019719176,1.39059456153821,1.02286182932132,2.70124457927428,2.59586020908412,5.29564692021645,5.349499736234,3.79084137650512,2.10441855886474,5.72529949035896,4.13823787980251,3.06105620669094,5.12396380641431,5.64702942956021,3.33095672740609,5.43470002446427,3.10444044886819,3.44908788692548,3.78212160335639,5.27853372491847,5.47989331068937,5.83899223373756,3.1342694986995,3.70407845534298,4.77682240364384,4.91549231119264,5.40430604940902,8.80906848126337,4.14251545071004,3.51789089971644,7.92273070428465,4.02466050494857,4.9191057936851,5.39934895105824,4.88321283975857,6.17028823219124,6.77238985729583,6.58239399653922,6.56669856316381,2.83740833410495,6.57899943413995,4.17145219052996,5.50246316917524,2.52347938276953,4.73361216944708,1.65209391491899,3.17340679996253,6.39864751605702,6.50262681209228,3.99489130098489,5.24377164020691,2.66853652613844,2.09248188723815,5.21981967698963,3.95277491337626,4.02136334080431,3.38226002469956,3.31438948102504,5.39291645192533,3.02593269824572,2.98711909881551,6.63837653335786,6.16941968092536,5.63538678365402,6.10953983535943,4.46090720485539,6.10181633045771,2.78240763346732,1.91893192373483,2.98297582898612,2.83813477020141,1.48226313543574,4.33797274861845,4.91397487783007,8.7696223830093,3.24576194221605,3.13530307678142,4.07401362850272,3.74004978686054,7.45822043165163,5.76578967694971,1.43768206527355,4.46569137202204,4.68056509671841,5.30415643688935,3.40855085691633,5.30687873499704,2.03228509183265,6.63219941196697,4.23708938749267,7.29903868833309,5.39787571063555,2.1775813467436,2.61848004974615,3.51240566144038,4.25614889086716,2.43611158613652,2.39182152986231,2.94953966488328,2.07221978239075,3.32692834737477,3.01582567878545,2.17562273527484,2.45882136509518,3.31124095565679,3.37156238974363,3.28192722458169,5.57378814280696,3.7870639080656,2.83957397474631,4.68526493155966,4.73931475012158,5.4962823529087,2.22798674082394,3.96307143104365,3.64329631507405,3.79932615284705,5.53402889125133,3.85585579706168,2.6968616189571,7.12262414669021,6.18970445543589,3.79431282836832,6.63725691699814,8.01176099311439,8.76738315197778,6.97838795096823,4.42952839321159,2.15204603560749,7.23599220871019,5.81653967164009,7.84294232446387,6.32073515871632,7.37930260024991,7.21948802737308,1.70219802876894,3.24109969256358,7.37344497561701,7.50179622610573,1.41872186913819,6.24290861607247,4.60737257685939,8.52501857520878,3.75474732901937,3.1774810629573,3.30792597082443,2.63818004706368,4.03661066739764,4.22190474497091,4.65552141612232,5.25250879184196,4.37221254944776,2.03967832211561,4.44264290074417,5.36605856704379,6.11141940320049,5.27431679613135,5.05768642567793,5.94823250336959,9.5187920796559,12.0358248998346,9.39759821870082,1.90934123603023,3.95419991976419,3.45643094115643,5.83228840437727,6.06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| |phase1_expression=8.64803774365887,2.44282785347553,2.27499619694768,1.20985684522732,2.00358291978539,4.19698179779725,3.50418960893289,17.4316486646128,33.6485045942484,38.3865823168069,17.1217968225505,25.7664073554937,12.1552518251156,17.6589212886375,6.32908547449759,4.04950534779652,10.4934281719222,6.15151222448563,6.17014951225825,3.39511721438424,5.10259740906419,9.53193131528499,5.48519557191764,3.03985603307473,3.44113921600755,4.01962374880514,1.7230479846363,3.878482188346,3.23039813075836,4.78857246543868,10.4213340007993,26.0362576118449,31.3683041668131,0,13.8648777480612,8.14549762256613,12.8626694445293,6.69650609179052,4.6880120671428,5.23523743973798,3.52938892818609,2.04913645487534,5.82612423637384,6.16894408080329,5.37297735463427,5.87349606917381,10.9534788208725,3.92445281484804,4.61340983742391,3.30530828426282,4.19959264876088,1.43752564364972,23.4895648480831,15.2326049822382,25.5431287348273,3.8588915405392,2.0057340795713,5.15672092277442,5.05791152148994,4.7609188134483,5.70448263155561,10.5041804941431,1.77858959222228,4.49949858640699,2.96659908770092,7.104801149461,5.99200221036809,6.91592949578798,5.39185984004084,6.88530285491622,3.78584930432488,7.14127461009509,4.8591079009355,2.57230678351403,3.83381884072945,4.5960939330501,4.40463523997555,2.93680877595932,2.61131106535614,3.82470234417562,5.03182039813253,2.08365348222704,4.4669279840221,4.50210088025344,2.75036845998258,2.65165726926301,2.98980529678116,4.47358669980721,8.63278603998298,4.08086424576642,6.08715426273523,3.44169550792555,3.39985666853875,0,4.54843492213368,4.03224198387602,2.52799956237153,3.2381761289831,5.71529210126311,3.88673531961374,6.61964072950398,2.56652954828636,2.54805239706646,0,7.79367747640371,9.62767488805375,7.58286667522175,3.9964357901671,2.84831672011889,1.92974780784272,7.45986905094384,4.87144765299426,5.07354093963329,6.48107354376277,5.05631440683531,3.89566433121994,3.21353458054686,3.32578520915797,3.5384422077995,3.39710384889559,4.63767188766826,2.90925151881133,1.86391761218122,2.04946557908083,4.1889341362691,3.32094171771169,9.22576458695586,8.99854096490112,10.4197586199913,3.44518470631092,3.20250421973039,5.78010019719176,1.39059456153821,1.02286182932132,2.70124457927428,2.59586020908412,5.29564692021645,5.349499736234,3.79084137650512,2.10441855886474,5.72529949035896,4.13823787980251,3.06105620669094,5.12396380641431,5.64702942956021,3.33095672740609,5.43470002446427,3.10444044886819,3.44908788692548,3.78212160335639,5.27853372491847,5.47989331068937,5.83899223373756,3.1342694986995,3.70407845534298,4.77682240364384,4.91549231119264,5.40430604940902,8.80906848126337,4.14251545071004,3.51789089971644,7.92273070428465,4.02466050494857,4.9191057936851,5.39934895105824,4.88321283975857,6.17028823219124,6.77238985729583,6.58239399653922,6.56669856316381,2.83740833410495,6.57899943413995,4.17145219052996,5.50246316917524,2.52347938276953,4.73361216944708,1.65209391491899,3.17340679996253,6.39864751605702,6.50262681209228,3.99489130098489,5.24377164020691,2.66853652613844,2.09248188723815,5.21981967698963,3.95277491337626,4.02136334080431,3.38226002469956,3.31438948102504,5.39291645192533,3.02593269824572,2.98711909881551,6.63837653335786,6.16941968092536,5.63538678365402,6.10953983535943,4.46090720485539,6.10181633045771,2.78240763346732,1.91893192373483,2.98297582898612,2.83813477020141,1.48226313543574,4.33797274861845,4.91397487783007,8.7696223830093,3.24576194221605,3.13530307678142,4.07401362850272,3.74004978686054,7.45822043165163,5.76578967694971,1.43768206527355,4.46569137202204,4.68056509671841,5.30415643688935,3.40855085691633,5.30687873499704,2.03228509183265,6.63219941196697,4.23708938749267,7.29903868833309,5.39787571063555,2.1775813467436,2.61848004974615,3.51240566144038,4.25614889086716,2.43611158613652,2.39182152986231,2.94953966488328,2.07221978239075,3.32692834737477,3.01582567878545,2.17562273527484,2.45882136509518,3.31124095565679,3.37156238974363,3.28192722458169,5.57378814280696,3.7870639080656,2.83957397474631,4.68526493155966,4.73931475012158,5.4962823529087,2.22798674082394,3.96307143104365,3.64329631507405,3.79932615284705,5.53402889125133,3.85585579706168,2.6968616189571,7.12262414669021,6.18970445543589,3.79431282836832,6.63725691699814,8.01176099311439,8.76738315197778,6.97838795096823,4.42952839321159,2.15204603560749,7.23599220871019,5.81653967164009,7.84294232446387,6.32073515871632,7.37930260024991,7.21948802737308,1.70219802876894,3.24109969256358,7.37344497561701,7.50179622610573,1.41872186913819,6.24290861607247,4.60737257685939,8.52501857520878,3.75474732901937,3.1774810629573,3.30792597082443,2.63818004706368,4.03661066739764,4.22190474497091,4.65552141612232,5.25250879184196,4.37221254944776,2.03967832211561,4.44264290074417,5.36605856704379,6.11141940320049,5.27431679613135,5.05768642567793,5.94823250336959,9.5187920796559,12.0358248998346,9.39759821870082,1.90934123603023,3.95419991976419,3.45643094115643,5.83228840437727,6.06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| ||
|short_description=p2@Gm13611,p2@Gm4604,p2@LOC637553,p2@Rpl36 | |short_description=p2@Gm13611,p2@Gm4604,p2@LOC637553,p2@Rpl36 | ||
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Latest revision as of 17:18, 26 September 2015
Short description: | p2@Gm13611, p2@Gm4604, p2@LOC637553, p2@Rpl36 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm13611_5end, CAGE_peak_2_at_Gm4604_5end, CAGE_peak_2_at_LOC637553_5end, CAGE_peak_2_at_Rpl36_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000080492, NM_018730, uc008dcn.2_5end |
EntrezGene: | 100043718,100504319,54217,637553 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.46e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.46e-09 | 32 |
hematopoietic stem cell | 1.46e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.46e-09 | 32 |
lymphocyte | 9.20e-09 | 13 |
common lymphoid progenitor | 9.20e-09 | 13 |
lymphoid lineage restricted progenitor cell | 1.51e-08 | 12 |
T cell | 6.90e-08 | 11 |
pro-T cell | 6.90e-08 | 11 |
mature alpha-beta T cell | 2.08e-07 | 9 |
alpha-beta T cell | 2.08e-07 | 9 |
immature T cell | 2.08e-07 | 9 |
mature T cell | 2.08e-07 | 9 |
immature alpha-beta T cell | 2.08e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 3.16e-07 | 25 |
leukocyte | 4.95e-07 | 17 |
nongranular leukocyte | 4.95e-07 | 17 |
CD4-positive, alpha-beta T cell | 9.63e-07 | 8 |
stem cell | 9.90e-07 | 97 |