FFCP PHASE1:Mm9::chr11:102179101..102179130,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:102179101..102179130,-
|short_description=p3@Ubtf
|description=CAGE_peak_3_at_Ubtf_5end
|association_with_transcript=54bp_to_ENSMUST00000107117_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21429 | |EntrezGene=21429 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2AWT6 | |UniProt=A2AWT6 | ||
|association_with_transcript=54bp_to_ENSMUST00000107117_5end | |||
|cluster_id=chr11:102179101..102179130,- | |||
|description=CAGE_peak_3_at_Ubtf_5end | |||
|id=chr11:102179101..102179130,- | |||
|ontology_enrichment_celltype=CL:0000221!7.37e-10!44;CL:0000133!7.37e-10!44;CL:0002319!1.57e-09!43;CL:0000117!2.22e-09!23;CL:0000337!2.22e-09!23;CL:0000540!4.03e-09!33;CL:0000047!4.03e-09!33;CL:0000031!4.03e-09!33;CL:0000404!4.03e-09!33;CL:0000393!3.94e-08!39;CL:0000211!3.94e-08!39;CL:0000055!5.40e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.75e-10,44;CL:0000133,6.75e-10,44;CL:0002319,1.44e-09,43;CL:0000117,2.19e-09,23;CL:0000337,2.19e-09,23;CL:0000540,3.68e-09,33;CL:0000047,3.68e-09,33;CL:0000031,3.68e-09,33;CL:0000404,3.68e-09,33;CL:0000393,3.64e-08,39;CL:0000211,3.64e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.21e-21!94;UBERON:0007811!3.42e-21!86;UBERON:0001017!7.11e-16!73;UBERON:0005743!7.11e-16!73;UBERON:0000073!1.02e-15!75;UBERON:0001016!1.02e-15!75;UBERON:0004121!5.48e-15!102;UBERON:0000924!5.48e-15!102;UBERON:0006601!5.48e-15!102;UBERON:0000033!1.00e-14!63;UBERON:0002346!3.78e-14!71;UBERON:0003075!3.78e-14!71;UBERON:0007284!3.78e-14!71;UBERON:0003056!9.99e-14!49;UBERON:0001049!2.05e-12!52;UBERON:0005068!2.05e-12!52;UBERON:0006241!2.05e-12!52;UBERON:0007135!2.05e-12!52;UBERON:0000955!3.41e-12!50;UBERON:0006238!3.41e-12!50;UBERON:0002616!1.12e-11!49;UBERON:0003080!1.93e-10!40;UBERON:0002780!3.23e-10!39;UBERON:0001890!3.23e-10!39;UBERON:0006240!3.23e-10!39;UBERON:0002020!4.99e-09!34;UBERON:0002791!1.93e-07!29;UBERON:0003528!1.93e-07!29;UBERON:0001893!1.93e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.07e-16,95;UBERON:0000924,6.07e-16,95;UBERON:0006601,6.07e-16,95;UBERON:0001017,6.42e-16,73;UBERON:0001016,9.21e-16,75;UBERON:0002346,1.37e-15,64;UBERON:0003075,1.37e-15,64;UBERON:0007284,1.37e-15,64;UBERON:0010371,1.55e-14,73;UBERON:0003056,9.76e-14,49;UBERON:0000073,2.11e-13,54;UBERON:0001049,2.01e-12,52;UBERON:0005068,2.01e-12,52;UBERON:0006241,2.01e-12,52;UBERON:0007135,2.01e-12,52;UBERON:0000955,1.69e-11,47;UBERON:0006238,1.69e-11,47;UBERON:0002616,5.45e-11,46;UBERON:0003080,1.89e-10,40;UBERON:0002780,3.17e-10,39;UBERON:0001890,3.17e-10,39;UBERON:0006240,3.17e-10,39;UBERON:0010314,1.03e-09,92;UBERON:0002020,4.92e-09,34;UBERON:0000153,5.43e-09,43;UBERON:0007811,1.94e-08,36;UBERON:0003528,1.91e-07,29;UBERON:0002791,1.91e-07,29;UBERON:0001893,1.91e-07,29 | |||
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| ||
|short_description=p3@Ubtf | |||
}} | }} |
Latest revision as of 18:10, 26 September 2015
Short description: | p3@Ubtf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ubtf_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENSMUST00000107117_5end |
EntrezGene: | Ubtf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.75e-10 | 44 |
neurectodermal cell | 6.75e-10 | 44 |
neural cell | 1.44e-09 | 43 |
CNS neuron (sensu Vertebrata) | 2.19e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.19e-09 | 23 |
neuron | 3.68e-09 | 33 |
neuronal stem cell | 3.68e-09 | 33 |
neuroblast | 3.68e-09 | 33 |
electrically signaling cell | 3.68e-09 | 33 |
electrically responsive cell | 3.64e-08 | 39 |
electrically active cell | 3.64e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.07e-16 | 95 |
ectoderm | 6.07e-16 | 95 |
presumptive ectoderm | 6.07e-16 | 95 |
central nervous system | 6.42e-16 | 73 |
nervous system | 9.21e-16 | 75 |
neurectoderm | 1.37e-15 | 64 |
neural plate | 1.37e-15 | 64 |
presumptive neural plate | 1.37e-15 | 64 |
ecto-epithelium | 1.55e-14 | 73 |
pre-chordal neural plate | 9.76e-14 | 49 |
regional part of nervous system | 2.11e-13 | 54 |
neural tube | 2.01e-12 | 52 |
neural rod | 2.01e-12 | 52 |
future spinal cord | 2.01e-12 | 52 |
neural keel | 2.01e-12 | 52 |
brain | 1.69e-11 | 47 |
future brain | 1.69e-11 | 47 |
regional part of brain | 5.45e-11 | 46 |
anterior neural tube | 1.89e-10 | 40 |
regional part of forebrain | 3.17e-10 | 39 |
forebrain | 3.17e-10 | 39 |
future forebrain | 3.17e-10 | 39 |
structure with developmental contribution from neural crest | 1.03e-09 | 92 |
gray matter | 4.92e-09 | 34 |
anterior region of body | 5.43e-09 | 43 |
craniocervical region | 1.94e-08 | 36 |
brain grey matter | 1.91e-07 | 29 |
regional part of telencephalon | 1.91e-07 | 29 |
telencephalon | 1.91e-07 | 29 |