FFCP PHASE1:Mm9::chr4:154273186..154273206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66469 | |EntrezGene=66469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1295 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB60 | |UniProt=Q9DB60 | ||
|association_with_transcript=12bp_to_ENSMUST00000030935_5end | |association_with_transcript=12bp_to_ENSMUST00000030935_5end | ||
|cluster_id=chr4:154273186..154273206,- | |||
|description=CAGE_peak_2_at_2810405K02Rik_5end | |description=CAGE_peak_2_at_2810405K02Rik_5end | ||
|id=chr4:154273186..154273206,- | |id=chr4:154273186..154273206,- | ||
|ontology_enrichment_celltype=CL:0000117!3.08e-07!23;CL:0000337!3.08e-07!23 | |ontology_enrichment_celltype=CL:0000117!3.08e-07!23;CL:0000337!3.08e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-07,23;CL:0000337,2.15e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.51e-14!52;UBERON:0005068!2.51e-14!52;UBERON:0006241!2.51e-14!52;UBERON:0007135!2.51e-14!52;UBERON:0000955!3.15e-14!50;UBERON:0006238!3.15e-14!50;UBERON:0002616!6.77e-14!49;UBERON:0002346!4.87e-13!71;UBERON:0003075!4.87e-13!71;UBERON:0007284!4.87e-13!71;UBERON:0000033!5.65e-13!63;UBERON:0001017!5.53e-12!73;UBERON:0005743!5.53e-12!73;UBERON:0004121!3.14e-11!102;UBERON:0000924!3.14e-11!102;UBERON:0006601!3.14e-11!102;UBERON:0002020!3.50e-11!34;UBERON:0000073!4.01e-11!75;UBERON:0001016!4.01e-11!75;UBERON:0003080!1.95e-10!40;UBERON:0002780!5.99e-10!39;UBERON:0001890!5.99e-10!39;UBERON:0006240!5.99e-10!39;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0003056!7.87e-09!49;UBERON:0000344!1.36e-07!15;UBERON:0007811!1.54e-07!86;UBERON:0000153!1.99e-07!94;UBERON:0001242!3.23e-07!13;UBERON:0000060!3.23e-07!13;UBERON:0001262!3.23e-07!13;UBERON:0004786!3.23e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-16,54;UBERON:0001049,8.23e-15,52;UBERON:0005068,8.23e-15,52;UBERON:0006241,8.23e-15,52;UBERON:0007135,8.23e-15,52;UBERON:0010314,7.47e-13,92;UBERON:0000955,7.53e-13,47;UBERON:0006238,7.53e-13,47;UBERON:0002616,1.64e-12,46;UBERON:0001017,9.03e-12,73;UBERON:0002020,1.19e-11,34;UBERON:0002346,2.22e-11,64;UBERON:0003075,2.22e-11,64;UBERON:0007284,2.22e-11,64;UBERON:0003080,7.19e-11,40;UBERON:0001016,9.94e-11,75;UBERON:0002780,2.33e-10,39;UBERON:0001890,2.33e-10,39;UBERON:0006240,2.33e-10,39;UBERON:0010371,2.98e-10,73;UBERON:0003528,4.36e-10,29;UBERON:0002791,4.36e-10,29;UBERON:0001893,4.36e-10,29;UBERON:0003056,4.57e-09,49;UBERON:0004121,6.60e-09,95;UBERON:0000924,6.60e-09,95;UBERON:0006601,6.60e-09,95;UBERON:0000344,6.85e-08,15;UBERON:0001242,1.70e-07,13;UBERON:0001262,1.70e-07,13;UBERON:0004786,1.70e-07,13;UBERON:0002021,9.96e-07,10;UBERON:0000411,9.96e-07,10;UBERON:0001950,9.96e-07,10 | |||
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| ||
|short_description=p2@2810405K02Rik | |short_description=p2@2810405K02Rik | ||
}} | }} |
Latest revision as of 19:32, 26 September 2015
Short description: | p2@2810405K02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2810405K02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1295 |
Association with transcript: | 12bp_to_ENSMUST00000030935_5end |
EntrezGene: | 2810405K02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.15e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.64e-16 | 54 |
neural tube | 8.23e-15 | 52 |
neural rod | 8.23e-15 | 52 |
future spinal cord | 8.23e-15 | 52 |
neural keel | 8.23e-15 | 52 |
structure with developmental contribution from neural crest | 7.47e-13 | 92 |
brain | 7.53e-13 | 47 |
future brain | 7.53e-13 | 47 |
regional part of brain | 1.64e-12 | 46 |
central nervous system | 9.03e-12 | 73 |
gray matter | 1.19e-11 | 34 |
neurectoderm | 2.22e-11 | 64 |
neural plate | 2.22e-11 | 64 |
presumptive neural plate | 2.22e-11 | 64 |
anterior neural tube | 7.19e-11 | 40 |
nervous system | 9.94e-11 | 75 |
regional part of forebrain | 2.33e-10 | 39 |
forebrain | 2.33e-10 | 39 |
future forebrain | 2.33e-10 | 39 |
ecto-epithelium | 2.98e-10 | 73 |
brain grey matter | 4.36e-10 | 29 |
regional part of telencephalon | 4.36e-10 | 29 |
telencephalon | 4.36e-10 | 29 |
pre-chordal neural plate | 4.57e-09 | 49 |
ectoderm-derived structure | 6.60e-09 | 95 |
ectoderm | 6.60e-09 | 95 |
presumptive ectoderm | 6.60e-09 | 95 |
mucosa | 6.85e-08 | 15 |
intestinal mucosa | 1.70e-07 | 13 |
wall of intestine | 1.70e-07 | 13 |
gastrointestinal system mucosa | 1.70e-07 | 13 |
occipital lobe | 9.96e-07 | 10 |
visual cortex | 9.96e-07 | 10 |
neocortex | 9.96e-07 | 10 |