FFCP PHASE1:Mm9::chr7:52391761..52391821,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:52391761..52391821,- to FFCP PHASE1:Mm9::chr7:52391761..52391821,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22121,14256 | |EntrezGene=22121,14256 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCH4,P49772,Q61104,A9QW46 | |UniProt=Q8VCH4,P49772,Q61104,A9QW46 | ||
|association_with_transcript=0bp_to_ENSMUST00000003516,ENSMUST00000128778,ENSMUST00000146760,ENSMUST00000169677,NM_013520,uc009gtn.2,uc009gto.2_5end | |||
|cluster_id=chr7:52391761..52391821,- | |||
|description=CAGE_peak_2_at_Flt3l_5end,CAGE_peak_2_at_Rpl13a_5end | |||
|id=chr7:52391761..52391821,- | |||
|ontology_enrichment_celltype=CL:0000839!2.24e-08!13;CL:0000763!7.20e-08!16;CL:0000049!1.03e-07!19;CL:0002320!4.90e-07!46;CL:0000134!4.90e-07!46;CL:0000219!7.37e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.76e-08,13;CL:0000763,5.75e-08,16;CL:0000049,8.28e-08,19;CL:0002320,3.52e-07,46;CL:0000134,3.52e-07,46;CL:0000219,7.49e-07,54;CL:0000050,9.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.45e-12!70;UBERON:0005256!2.80e-08!47;UBERON:0002193!7.57e-08!48;UBERON:0002371!1.07e-07!16;UBERON:0005172!1.54e-07!49;UBERON:0005173!1.54e-07!49;UBERON:0002417!1.54e-07!49;UBERON:0000916!1.54e-07!49;UBERON:0009569!1.77e-07!66;UBERON:0002384!4.90e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.05e-09,45;UBERON:0002193,4.61e-08,48;UBERON:0002405,4.61e-08,48;UBERON:0002371,8.57e-08,16;UBERON:0005172,9.33e-08,49;UBERON:0005173,9.33e-08,49;UBERON:0002417,9.33e-08,49;UBERON:0000916,9.33e-08,49;UBERON:0009569,9.84e-08,66;UBERON:0002100,2.95e-07,90;UBERON:0002384,3.52e-07,46;UBERON:0002390,7.27e-07,45;UBERON:0003061,7.27e-07,45 | |||
|phase1_expression=0.80074423552397,2.44282785347553,5.0049916332849,0.90739263392049,1.50268718983904,2.51818907867835,3.50418960893289,2.96983643915625,1.267098499365,0.70219357896598,0.513653904676515,0.638177271962691,2.05440875917447,1.83582845079895,6.32908547449759,7.08663435864391,4.19737126876888,21.6091583270393,19.4702495720149,21.2194825899015,1.9559956734746,7.94327609607082,5.22399578277871,5.59973479776923,4.81759490241057,2.8711598205751,3.4460959692726,3.01659725760245,1.52018735565099,1.26015064879965,3.76941868114018,13.3356441426523,13.5314253268605,15.8481681015439,0.866554859253824,0.498703936075477,0.612508068787107,12.1374172913703,10.9386948233332,8.37637990358077,7.64700934440319,8.87959130445979,7.2826552954673,1.1330713617802,0.608261587317087,0.917733760808408,5.47673941043627,0.65407546914134,2.41654801007919,2.13872888981712,4.19959264876088,4.31257693094915,18.6238692724087,4.35217285206807,3.02484419228218,2.82985379639542,3.43840127926508,2.57836046138721,0.202316460859598,0.528990979272033,0,2.03306719241479,4.4464739805557,6.74924787961049,9.88866362566974,13.4991221839759,5.39280198933128,3.45796474789399,0.311068836925433,0.135005938331691,0.420649922702764,1.14260393761521,2.42955395046775,0,0.191690942036473,0,1.10115880999389,0.893811366596314,1.38245879930619,0.131886287730194,0.274462930807229,0,0.558365998002762,2.8138130501584,0.916789486660861,0.589257170947335,1.28134512719193,0.372798891650601,0.832988126665025,1.88928900266964,6.37701875143691,5.16254326188832,0,3.2382191498269,4.54843492213368,1.79210754838934,2.66844398250329,2.04516387093669,1.81850203222008,1.06001872353102,0,0,0,7.11066703153331,1.73192832808971,1.01343946190039,1.01104889002957,1.94112595522402,28.4831672011889,9.05497048295431,3.12273588179045,4.56698217468212,5.07354093963329,3.76806601381556,6.11461277105665,5.78066320116507,1.23597483867187,3.61498392299779,4.42305275974937,1.61766849947409,3.09178125844551,4.363877278217,0,3.80615036115011,2.51336048176146,4.08731288333746,3.83408398418945,1.19980546198682,4.57452817463033,1.3481157546434,3.20250421973039,0.125654352112864,2.43354048269187,1.53429274398198,3.32460871295296,2.59586020908412,1.42575109390443,5.59831367745419,2.77995034277042,2.73574412652416,0,0.689706313300419,0.540186389416048,1.05493372485001,0.612328492361951,0.2562274405697,0.187403449119458,2.32833033665114,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,1.39023624612799,1.74126083261083,3.08673204611915,0.59710280045548,4.91549231119264,1.28673953557358,2.84163499395593,1.65700618028402,0.938104239924385,0.540186184383045,0.473489471170421,0.393528463494808,0.771335564436891,1.16266972375204,0.268273401399619,1.40118410840603,1.31647879930784,1.31333971263276,1.94565142910054,1.60819986167866,2.85415149878366,3.62357330653004,2.52347938276953,0.308713837137853,3.63460661282178,1.32225283331772,0.213288250535234,0.696710015581316,1.03093969057675,1.61346819698674,2.00140239460383,2.28270751335071,2.84717436926707,1.64698954724011,2.26201687920243,2.18852119245266,3.31438948102504,0.898819408654221,1.94524244887225,2.58883655230677,0.379335801906163,0.913988100877831,0,0.610953983535943,1.16371492300575,1.75339549725796,2.08680572510049,2.21415221969403,2.66897837330337,1.85095745882701,2.66807364378434,6.34011401721157,5.30709286805648,9.89393294493356,5.68008339887808,5.788251834058,2.80088436959562,3.16465751195892,3.72911021582581,1.92192989231657,5.75072826109418,4.09355042435354,5.30464044294753,3.03094653536534,3.40855085691633,4.82443521363367,7.944387177164,0.568474235311454,0.162964976442026,1.01847051465113,1.40814148973101,3.85264392116176,3.09456733151818,2.53673742215138,2.52216230569906,3.32197034473162,5.26200736569707,5.73521601505083,6.56202931090403,5.06271705035291,9.04747703635634,16.3171705145613,0.983528546038072,2.20749397043786,1.9266070798535,1.99259867206745,0.491804836130026,1.76729649043061,0.94652465824877,0.390438744296638,1.29254038639679,0.955875191810208,0.445597348164788,0.283076530788832,1.21443210502468,2.04579100537918,0.395287777946524,2.89189184779626,2.98074178937364,1.6025904330053,0.977321756121456,6.26886467295635,1.32745138339963,0.728341908464944,1.51161778482376,0.943025398779491,1.18120757152309,1.22974059177571,2.06742634534577,2.54473610634254,1.78248689192361,2.84433082142234,4.21674434299995,0,13.6175842301515,0.900305470156551,1.16422815404479,1.92903331528433,1.59606210278046,1.07021290561242,2.30368628842969,2.43571959291679,2.11204537257339,2.1183207086382,4.85162475720916,4.78170133530292,2.58343082713449,1.02531972377865,1.3130957840345,2.62625439592098,4.08073171281791,2.41052892613663,11.2774781326583,5.77883230297023,3.88908507476395,9.60679130723924,11.8923978117292,8.69357058184786,4.07948231985253,3.91864066506242,4.56059913554598,8.59203556213602,0,0.406638934253697,1.62008011232702,1.67270636811575,1.52853794622324,1.75323650300267,2.31429676030941,1.04702376793612,2.5922994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| |phase1_expression=0.80074423552397,2.44282785347553,5.0049916332849,0.90739263392049,1.50268718983904,2.51818907867835,3.50418960893289,2.96983643915625,1.267098499365,0.70219357896598,0.513653904676515,0.638177271962691,2.05440875917447,1.83582845079895,6.32908547449759,7.08663435864391,4.19737126876888,21.6091583270393,19.4702495720149,21.2194825899015,1.9559956734746,7.94327609607082,5.22399578277871,5.59973479776923,4.81759490241057,2.8711598205751,3.4460959692726,3.01659725760245,1.52018735565099,1.26015064879965,3.76941868114018,13.3356441426523,13.5314253268605,15.8481681015439,0.866554859253824,0.498703936075477,0.612508068787107,12.1374172913703,10.9386948233332,8.37637990358077,7.64700934440319,8.87959130445979,7.2826552954673,1.1330713617802,0.608261587317087,0.917733760808408,5.47673941043627,0.65407546914134,2.41654801007919,2.13872888981712,4.19959264876088,4.31257693094915,18.6238692724087,4.35217285206807,3.02484419228218,2.82985379639542,3.43840127926508,2.57836046138721,0.202316460859598,0.528990979272033,0,2.03306719241479,4.4464739805557,6.74924787961049,9.88866362566974,13.4991221839759,5.39280198933128,3.45796474789399,0.311068836925433,0.135005938331691,0.420649922702764,1.14260393761521,2.42955395046775,0,0.191690942036473,0,1.10115880999389,0.893811366596314,1.38245879930619,0.131886287730194,0.274462930807229,0,0.558365998002762,2.8138130501584,0.916789486660861,0.589257170947335,1.28134512719193,0.372798891650601,0.832988126665025,1.88928900266964,6.37701875143691,5.16254326188832,0,3.2382191498269,4.54843492213368,1.79210754838934,2.66844398250329,2.04516387093669,1.81850203222008,1.06001872353102,0,0,0,7.11066703153331,1.73192832808971,1.01343946190039,1.01104889002957,1.94112595522402,28.4831672011889,9.05497048295431,3.12273588179045,4.56698217468212,5.07354093963329,3.76806601381556,6.11461277105665,5.78066320116507,1.23597483867187,3.61498392299779,4.42305275974937,1.61766849947409,3.09178125844551,4.363877278217,0,3.80615036115011,2.51336048176146,4.08731288333746,3.83408398418945,1.19980546198682,4.57452817463033,1.3481157546434,3.20250421973039,0.125654352112864,2.43354048269187,1.53429274398198,3.32460871295296,2.59586020908412,1.42575109390443,5.59831367745419,2.77995034277042,2.73574412652416,0,0.689706313300419,0.540186389416048,1.05493372485001,0.612328492361951,0.2562274405697,0.187403449119458,2.32833033665114,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,1.39023624612799,1.74126083261083,3.08673204611915,0.59710280045548,4.91549231119264,1.28673953557358,2.84163499395593,1.65700618028402,0.938104239924385,0.540186184383045,0.473489471170421,0.393528463494808,0.771335564436891,1.16266972375204,0.268273401399619,1.40118410840603,1.31647879930784,1.31333971263276,1.94565142910054,1.60819986167866,2.85415149878366,3.62357330653004,2.52347938276953,0.308713837137853,3.63460661282178,1.32225283331772,0.213288250535234,0.696710015581316,1.03093969057675,1.61346819698674,2.00140239460383,2.28270751335071,2.84717436926707,1.64698954724011,2.26201687920243,2.18852119245266,3.31438948102504,0.898819408654221,1.94524244887225,2.58883655230677,0.379335801906163,0.913988100877831,0,0.610953983535943,1.16371492300575,1.75339549725796,2.08680572510049,2.21415221969403,2.66897837330337,1.85095745882701,2.66807364378434,6.34011401721157,5.30709286805648,9.89393294493356,5.68008339887808,5.788251834058,2.80088436959562,3.16465751195892,3.72911021582581,1.92192989231657,5.75072826109418,4.09355042435354,5.30464044294753,3.03094653536534,3.40855085691633,4.82443521363367,7.944387177164,0.568474235311454,0.162964976442026,1.01847051465113,1.40814148973101,3.85264392116176,3.09456733151818,2.53673742215138,2.52216230569906,3.32197034473162,5.26200736569707,5.73521601505083,6.56202931090403,5.06271705035291,9.04747703635634,16.3171705145613,0.983528546038072,2.20749397043786,1.9266070798535,1.99259867206745,0.491804836130026,1.76729649043061,0.94652465824877,0.390438744296638,1.29254038639679,0.955875191810208,0.445597348164788,0.283076530788832,1.21443210502468,2.04579100537918,0.395287777946524,2.89189184779626,2.98074178937364,1.6025904330053,0.977321756121456,6.26886467295635,1.32745138339963,0.728341908464944,1.51161778482376,0.943025398779491,1.18120757152309,1.22974059177571,2.06742634534577,2.54473610634254,1.78248689192361,2.84433082142234,4.21674434299995,0,13.6175842301515,0.900305470156551,1.16422815404479,1.92903331528433,1.59606210278046,1.07021290561242,2.30368628842969,2.43571959291679,2.11204537257339,2.1183207086382,4.85162475720916,4.78170133530292,2.58343082713449,1.02531972377865,1.3130957840345,2.62625439592098,4.08073171281791,2.41052892613663,11.2774781326583,5.77883230297023,3.88908507476395,9.60679130723924,11.8923978117292,8.69357058184786,4.07948231985253,3.91864066506242,4.56059913554598,8.59203556213602,0,0.406638934253697,1.62008011232702,1.67270636811575,1.52853794622324,1.75323650300267,2.31429676030941,1.04702376793612,2.5922994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| ||
|short_description=p2@Flt3l,p2@Rpl13a | |||
}} | }} |
Latest revision as of 20:48, 26 September 2015
Short description: | p2@Flt3l, p2@Rpl13a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Flt3l_5end, CAGE_peak_2_at_Rpl13a_5end |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | 0bp_to_ENSMUST00000003516, ENSMUST00000128778, ENSMUST00000146760, ENSMUST00000169677, NM_013520, uc009gtn.2, uc009gto.2_5end |
EntrezGene: | 22121,14256 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.76e-08 | 13 |
myeloid cell | 5.75e-08 | 16 |
common myeloid progenitor | 8.28e-08 | 19 |
connective tissue cell | 3.52e-07 | 46 |
mesenchymal cell | 3.52e-07 | 46 |
motile cell | 7.49e-07 | 54 |
megakaryocyte-erythroid progenitor cell | 9.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.05e-09 | 45 |
hemolymphoid system | 4.61e-08 | 48 |
immune system | 4.61e-08 | 48 |
bone marrow | 8.57e-08 | 16 |
abdomen element | 9.33e-08 | 49 |
abdominal segment element | 9.33e-08 | 49 |
abdominal segment of trunk | 9.33e-08 | 49 |
abdomen | 9.33e-08 | 49 |
subdivision of trunk | 9.84e-08 | 66 |
trunk | 2.95e-07 | 90 |
connective tissue | 3.52e-07 | 46 |
hematopoietic system | 7.27e-07 | 45 |
blood island | 7.27e-07 | 45 |