Personal tools

FFCP PHASE1:Mm9::chr2:66622960..66622977,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:66622960..66622977,-
|DHSsupport=NA
|short_description=p1@Scn7a
|DPIdataset=NA
|description=CAGE_peak_1_at_Scn7a_5end
|association_with_transcript=0bp_to_ENSMUST00000042792,NM_009135,uc008jxf.2_5end
|EntrezGene=20272
|EntrezGene=20272
|HGNC=
|HGNC=
|MCL_coexpression_id=136
|TSSclassifier=NA
|UniProt=B1AYL1,Q62467
|UniProt=B1AYL1,Q62467
|association_with_transcript=0bp_to_ENSMUST00000042792,NM_009135,uc008jxf.2_5end
|cluster_id=chr2:66622960..66622977,-
|description=CAGE_peak_1_at_Scn7a_5end
|id=chr2:66622960..66622977,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005153!7.80e-11!17;UBERON:0002048!5.68e-10!14;UBERON:0000117!5.68e-10!14;UBERON:0000171!5.68e-10!14;UBERON:0000170!5.68e-10!14;UBERON:0005597!5.68e-10!14;UBERON:0000118!5.68e-10!14;UBERON:0005157!6.26e-10!27;UBERON:0000468!2.59e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0005157,7.79e-13,20;UBERON:0005153,6.38e-12,17;UBERON:0002048,5.86e-11,14;UBERON:0000117,5.86e-11,14;UBERON:0000171,5.86e-11,14;UBERON:0000170,5.86e-11,14;UBERON:0005597,5.86e-11,14;UBERON:0000118,5.86e-11,14;UBERON:0005178,1.06e-07,17;UBERON:0005181,1.06e-07,17;UBERON:0002224,1.06e-07,17;UBERON:0000915,1.06e-07,17;UBERON:0008947,1.06e-07,17;UBERON:0003258,1.06e-07,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,24.5775108536592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.09843091367236,2.13872888981712,0,0,0,0,0,6.43148590089868,31.5186783932632,5.15672092277442,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.856952953211411,1.32521124570968,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,1.12552522006336,3.97275444219706,1.47314292736834,1.56608848879013,2.42319279572891,2.04460721999597,6.65029728939713,1.15945795480671,0.860423876981386,0,0,0,0.448026887097336,6.03911006566533,0,0,0,0.422530259330042,0,0,0,0,0,0,5.59501010623394,5.17875767294343,9.64873903921361,0.346970653532272,0,1.15307748628029,2.11011696773672,4.46837087115678,4.27266410520897,1.23597483867187,20.5331086826275,0,0.647067399789637,1.98757366614354,0.969750506270444,14.9113408974498,0,0,3.0654846625031,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,1.53429274398198,0.20778804455956,0.324482526135515,2.85150218780886,4.85187185379363,4.29628689337247,9.89076722666428,0.130120442962704,0,0.360124259610698,0.60281927134286,1.56483948048054,1.66547836370305,1.3118241438362,8.01980449290949,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,2.67516777330327,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,2.60419209143731,0.983821158737019,1.3884040159864,1.86027155800326,8.04820204198858,3.85325629811659,2.30383789878873,7.71587081171748,14.3491792896165,14.3275987676826,16.2467085315377,17.8494536951294,0.841159794256509,0.102904612379284,0,7.40461586657924,0.426576501070468,0.928946687441754,0.38660238396628,0.80673409849337,1.33426826306922,1.33157938278791,4.74529061544512,2.30578536613615,2.5133520880027,3.78017296878187,5.45899443933536,3.59527763461689,7.3486936957396,9.35963984295526,1.32767530667157,2.62771579002376,1.1270773567308,3.86937522906097,1.55161989734101,3.43665517462561,3.60448261608267,2.06654207171443,2.04098346193787,2.09775178667061,0.889357881261447,0,0.196558995113203,0,0,0,8.14802725700543,24.4541716833189,0.324270453550071,0,1.43768206527355,28.2827120228063,2.18426371180192,1.76805214562978,0.358794827043824,0.482443521363367,164.060832867945,2.4633883530163,25.422536324956,68.4072695674008,162.87503231222,361.981022331764,567.734083513143,230.647971767918,488.511311585086,479.913982468895,520.141455360723,416.540546007406,295.464003972547,227.099021972973,0,0,10.8188140064188,16.2802680319792,0.80275294993896,1.05490517932983,0,9.84636616097055,10.0962630213202,10.1514073517126,11.4174400798383,53.7679795393242,50.5752990167035,48.1230102341015,54.6494447261107,53.7750778556814,50.596835577155,0,6.52924391958036,0.534196811001766,2.76907830901079,7.9185659026817,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,1.18120757152309,3.68922177532713,5.16856586336442,5.81653967164009,3.20847640546249,12.3254335594968,3.16255825724996,6.18813259489121,32.3417625466099,0.540183282093931,0,0.428674070063185,1.41872186913819,4.28085162244969,12.6702745863633,17.9634319977614,0.469343416127421,0,10.1443063105282,16.6535115470895,7.58882805470756,2.83470747162333,2.626191568069,1.64140899745061,6.99554007911642,2.78137953015765,1.36696704638282,1.65109494370578,0.925972636848558,1.50694765603753,0.956859594047176,1.60144721244566,0,0,0,5.72802370809068,0.474503990371703,0.813277868507395,0.324016022465404,1.04544148007234,1.9652630737156,3.50647300600534,4.95920734352016,7.85267825952089,15.8130267415987,14.2908042009993,0,1.19613236835183,0.66183396182839,0.388902376688095,0.387479470433193,0.844780627453891,1.99507305697782,0.651021924219751,0.209718688851422,0,1.15212002503146,3.79213344753814,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.596044064343795,0.240390899039938,0.443068581523732,0.605798699688886,0.0762068066549998,0.504130925684203,0.682205165178267,0.384847366561318,1.63627663054197,13.8305534005279,0,0,0,30.3307662630539,7.50729901804728,1.28206136987086,5.78794623513478,5.517293144389,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,1.02440163452481,5.10524105843418,1.67690530102386,7.90527086335061,25.1138802415825,19.7793654949338,23.7480215097943,21.9846574234504,31.1779538864995,26.7849404768228,23.6913013898803,25.3539603523282,24.9269935267362,20.4806287251722,21.9021376035777,24.8852894398179,20.6042950401653,25.6126121033851,24.6865861717499,25.2015644746259,22.6514380449955,26.3077014104515,27.5740484616919,23.4382463859944,23.7806364734604,25.2546922980329,27.1608227691724,14.5896990631012,20.405223117358,19.7008964751127,13.5046244245997,20.6065998777335,20.2551941530198,0.749431733813838,23.8610240614317,14.8261027293326,6.12122662620299,6.17655973534643,5.79669589051054
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,24.5775108536592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.09843091367236,2.13872888981712,0,0,0,0,0,6.43148590089868,31.5186783932632,5.15672092277442,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.856952953211411,1.32521124570968,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,1.12552522006336,3.97275444219706,1.47314292736834,1.56608848879013,2.42319279572891,2.04460721999597,6.65029728939713,1.15945795480671,0.860423876981386,0,0,0,0.448026887097336,6.03911006566533,0,0,0,0.422530259330042,0,0,0,0,0,0,5.59501010623394,5.17875767294343,9.64873903921361,0.346970653532272,0,1.15307748628029,2.11011696773672,4.46837087115678,4.27266410520897,1.23597483867187,20.5331086826275,0,0.647067399789637,1.98757366614354,0.969750506270444,14.9113408974498,0,0,3.0654846625031,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,1.53429274398198,0.20778804455956,0.324482526135515,2.85150218780886,4.85187185379363,4.29628689337247,9.89076722666428,0.130120442962704,0,0.360124259610698,0.60281927134286,1.56483948048054,1.66547836370305,1.3118241438362,8.01980449290949,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,2.67516777330327,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,2.60419209143731,0.983821158737019,1.3884040159864,1.86027155800326,8.04820204198858,3.85325629811659,2.30383789878873,7.71587081171748,14.3491792896165,14.3275987676826,16.2467085315377,17.8494536951294,0.841159794256509,0.102904612379284,0,7.40461586657924,0.426576501070468,0.928946687441754,0.38660238396628,0.80673409849337,1.33426826306922,1.33157938278791,4.74529061544512,2.30578536613615,2.5133520880027,3.78017296878187,5.45899443933536,3.59527763461689,7.3486936957396,9.35963984295526,1.32767530667157,2.62771579002376,1.1270773567308,3.86937522906097,1.55161989734101,3.43665517462561,3.60448261608267,2.06654207171443,2.04098346193787,2.09775178667061,0.889357881261447,0,0.196558995113203,0,0,0,8.14802725700543,24.4541716833189,0.324270453550071,0,1.43768206527355,28.2827120228063,2.18426371180192,1.76805214562978,0.358794827043824,0.482443521363367,164.060832867945,2.4633883530163,25.422536324956,68.4072695674008,162.87503231222,361.981022331764,567.734083513143,230.647971767918,488.511311585086,479.913982468895,520.141455360723,416.540546007406,295.464003972547,227.099021972973,0,0,10.8188140064188,16.2802680319792,0.80275294993896,1.05490517932983,0,9.84636616097055,10.0962630213202,10.1514073517126,11.4174400798383,53.7679795393242,50.5752990167035,48.1230102341015,54.6494447261107,53.7750778556814,50.596835577155,0,6.52924391958036,0.534196811001766,2.76907830901079,7.9185659026817,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,1.18120757152309,3.68922177532713,5.16856586336442,5.81653967164009,3.20847640546249,12.3254335594968,3.16255825724996,6.18813259489121,32.3417625466099,0.540183282093931,0,0.428674070063185,1.41872186913819,4.28085162244969,12.6702745863633,17.9634319977614,0.469343416127421,0,10.1443063105282,16.6535115470895,7.58882805470756,2.83470747162333,2.626191568069,1.64140899745061,6.99554007911642,2.78137953015765,1.36696704638282,1.65109494370578,0.925972636848558,1.50694765603753,0.956859594047176,1.60144721244566,0,0,0,5.72802370809068,0.474503990371703,0.813277868507395,0.324016022465404,1.04544148007234,1.9652630737156,3.50647300600534,4.95920734352016,7.85267825952089,15.8130267415987,14.2908042009993,0,1.19613236835183,0.66183396182839,0.388902376688095,0.387479470433193,0.844780627453891,1.99507305697782,0.651021924219751,0.209718688851422,0,1.15212002503146,3.79213344753814,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.596044064343795,0.240390899039938,0.443068581523732,0.605798699688886,0.0762068066549998,0.504130925684203,0.682205165178267,0.384847366561318,1.63627663054197,13.8305534005279,0,0,0,30.3307662630539,7.50729901804728,1.28206136987086,5.78794623513478,5.517293144389,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,1.02440163452481,5.10524105843418,1.67690530102386,7.90527086335061,25.1138802415825,19.7793654949338,23.7480215097943,21.9846574234504,31.1779538864995,26.7849404768228,23.6913013898803,25.3539603523282,24.9269935267362,20.4806287251722,21.9021376035777,24.8852894398179,20.6042950401653,25.6126121033851,24.6865861717499,25.2015644746259,22.6514380449955,26.3077014104515,27.5740484616919,23.4382463859944,23.7806364734604,25.2546922980329,27.1608227691724,14.5896990631012,20.405223117358,19.7008964751127,13.5046244245997,20.6065998777335,20.2551941530198,0.749431733813838,23.8610240614317,14.8261027293326,6.12122662620299,6.17655973534643,5.79669589051054
|short_description=p1@Scn7a
}}
}}

Latest revision as of 20:56, 26 September 2015

Short description:p1@Scn7a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scn7a_5end
Coexpression cluster:MCL_coexpression_mm9:136
Association with transcript: 0bp_to_ENSMUST00000042792, NM_009135, uc008jxf.2_5end
EntrezGene:Scn7a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scn7a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D79.65
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H120.53
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G17.72
heart, neonate N16.CNhs11209.782-15G114.35
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D316.25
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D53.60
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G424.45
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H228.28
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B1164.06
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F825.42
lung, embryo E15.CNhs11020.432-17C568.41
lung, embryo E16.CNhs10998.458-17B6162.88
lung, embryo E17.CNhs10605.480-44A6361.98
lung, embryo E18.CNhs10583.1287-20I6567.73
lung, neonate N00.CNhs11224.640-42C6230.65
lung, neonate N06.CNhs11212.683-20E5488.51
lung, neonate N07.CNhs11111.715-19A3479.91
lung, neonate N10.CNhs11219.750-23E6520.14
lung, neonate N20.CNhs11109.822-18A4416.54
lung, neonate N25.CNhs11119.1359-25C7295.46
lung, neonate N30.CNhs11133.1394-42H2227.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H216.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D753.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D850.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D948.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D454.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D553.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D650.60
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G832.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C316.65
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I115.81
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B413.83
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E430.33
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.65
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F920.26
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold7.79e-1320
epithelial bud6.38e-1217
lung5.86e-1114
respiratory tube5.86e-1114
respiration organ5.86e-1114
pair of lungs5.86e-1114
lung primordium5.86e-1114
lung bud5.86e-1114
thoracic cavity element1.06e-0717
thoracic segment organ1.06e-0717
thoracic cavity1.06e-0717
thoracic segment of trunk1.06e-0717
respiratory primordium1.06e-0717
endoderm of foregut1.06e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:66622960..66622977,-&oldid=4273947"