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FFCP PHASE1:Mm9::chr6:142912628..142912648,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20449
|EntrezGene=20449
|HGNC=
|HGNC=
|MCL_coexpression_id=822
|TSSclassifier=NA
|UniProt=Q64687
|UniProt=Q64687
|association_with_transcript=323bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end
|association_with_transcript=323bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end
|cluster_id=chr6:142912628..142912648,-
|description=CAGE_peak_5_at_St8sia1_5end
|description=CAGE_peak_5_at_St8sia1_5end
|id=chr6:142912628..142912648,-
|id=chr6:142912628..142912648,-
|ontology_enrichment_celltype=CL:0000117!5.41e-08!23;CL:0000337!5.41e-08!23;CL:0000791!1.28e-07!9;CL:0000789!1.28e-07!9;CL:0002420!1.28e-07!9;CL:0002419!1.28e-07!9;CL:0000790!1.28e-07!9;CL:0000624!7.41e-07!8
|ontology_enrichment_celltype=CL:0000117!5.41e-08!23;CL:0000337!5.41e-08!23;CL:0000791!1.28e-07!9;CL:0000789!1.28e-07!9;CL:0002420!1.28e-07!9;CL:0002419!1.28e-07!9;CL:0000790!1.28e-07!9;CL:0000624!7.41e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,1.06e-17,9;CL:0000789,1.06e-17,9;CL:0002420,1.06e-17,9;CL:0002419,1.06e-17,9;CL:0000790,1.06e-17,9;CL:0000624,1.11e-15,8;CL:0000084,4.05e-14,11;CL:0000827,4.05e-14,11;CL:0000838,8.91e-13,12;CL:0000893,1.12e-11,6;CL:0002489,1.12e-11,6;CL:0000898,1.12e-11,6;CL:0000809,1.12e-11,6;CL:0000810,1.12e-11,6;CL:0000895,1.12e-11,6;CL:0000808,1.12e-11,6;CL:0000894,1.12e-11,6;CL:0000806,1.12e-11,6;CL:0000807,1.12e-11,6;CL:0000805,1.12e-11,6;CL:0002425,1.12e-11,6;CL:0002436,1.12e-11,6;CL:0002427,1.12e-11,6;CL:0002428,1.12e-11,6;CL:0002429,1.12e-11,6;CL:0002433,1.12e-11,6;CL:0002431,1.12e-11,6;CL:0002432,1.12e-11,6;CL:0000542,1.22e-11,13;CL:0000051,1.22e-11,13;CL:0000738,1.90e-08,17;CL:0002087,1.90e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.91e-18!86;UBERON:0000153!4.45e-17!94;UBERON:0003408!5.57e-10!24;UBERON:0001017!6.53e-10!73;UBERON:0005743!6.53e-10!73;UBERON:0001049!7.60e-10!52;UBERON:0005068!7.60e-10!52;UBERON:0006241!7.60e-10!52;UBERON:0007135!7.60e-10!52;UBERON:0002370!1.14e-09!23;UBERON:0000974!1.14e-09!23;UBERON:0004807!1.14e-09!23;UBERON:0005058!1.14e-09!23;UBERON:0003351!1.14e-09!23;UBERON:0009113!1.14e-09!23;UBERON:0003295!1.14e-09!23;UBERON:0009722!1.14e-09!23;UBERON:0005562!1.14e-09!23;UBERON:0007690!1.14e-09!23;UBERON:0000033!1.30e-09!63;UBERON:0002346!1.61e-09!71;UBERON:0003075!1.61e-09!71;UBERON:0007284!1.61e-09!71;UBERON:0000955!2.23e-09!50;UBERON:0006238!2.23e-09!50;UBERON:0000073!4.17e-09!75;UBERON:0001016!4.17e-09!75;UBERON:0002616!4.72e-09!49;UBERON:0006562!7.57e-09!24;UBERON:0001557!7.57e-09!24;UBERON:0001042!7.57e-09!24;UBERON:0008814!7.57e-09!24;UBERON:0009145!7.57e-09!24;UBERON:0004121!2.06e-08!102;UBERON:0000924!2.06e-08!102;UBERON:0006601!2.06e-08!102;UBERON:0000063!3.45e-08!35;UBERON:0004177!4.85e-08!29;UBERON:0002020!6.42e-07!34;UBERON:0000072!8.23e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.34e-25,23;UBERON:0000974,1.34e-25,23;UBERON:0004807,1.34e-25,23;UBERON:0005058,1.34e-25,23;UBERON:0003351,1.34e-25,23;UBERON:0009113,1.34e-25,23;UBERON:0003295,1.34e-25,23;UBERON:0009722,1.34e-25,23;UBERON:0005562,1.34e-25,23;UBERON:0007690,1.34e-25,23;UBERON:0006562,2.52e-24,24;UBERON:0003408,2.52e-24,24;UBERON:0001557,2.52e-24,24;UBERON:0001042,2.52e-24,24;UBERON:0008814,2.52e-24,24;UBERON:0009145,2.52e-24,24;UBERON:0000072,4.53e-21,27;UBERON:0004177,2.81e-19,29;UBERON:0005057,2.81e-19,29;UBERON:0007811,2.93e-18,36;UBERON:0000077,3.87e-15,35;UBERON:0000153,2.05e-14,43;UBERON:0000065,3.16e-12,41;UBERON:0001004,8.00e-12,42;UBERON:0002193,4.34e-11,48;UBERON:0002405,4.34e-11,48;UBERON:0002390,1.00e-10,45;UBERON:0003061,1.00e-10,45;UBERON:0003929,5.22e-09,55;UBERON:0002368,7.24e-08,60;UBERON:0000490,1.18e-07,66;UBERON:0002530,6.57e-07,65
|phase1_expression=1.76163731815273,0,0,0,0,0,0,4.26106967357202,2.25261955442667,3.27690336850791,1.02730780935303,1.03703806693937,7.87523357683546,8.74204024189974,0,0,0,0.157731082679119,0.411343300817216,0.42438965179803,1.02051948181284,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0,1.43752564364972,0,13.7818806982155,6.38578218370682,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.622137673850866,0.810035629990144,1.05162480675691,0.856952953211411,0.441737081903227,0.244981598429908,0.287536413054709,0,1.10115880999389,1.14918604276669,1.53606533256243,1.05509030184155,0.182975287204819,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.745597783301202,0,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,2.07150306917737,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.753613202763113,0,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,1.75668478206928,2.72280718857492,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,0.251308704225729,0.521472960576829,0.511430914660661,1.0389402227978,0.811206315338788,0.101839363850316,0,0,0.210441855886474,1.17108398666433,0.459804208866946,0.360124259610698,0.30140963567143,0.340182495756639,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0.995171334092466,0,0,0,1.24275463521301,1.17263029990548,0.720248245844059,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.853153002140936,0.928946687441754,0.515469845288373,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.203651327845314,0.581857461502877,0.631222379012867,0.885311519739602,0.590440591918409,0.627994911365499,0.863780147452604,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.9266070798535,1.40654023910644,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,1.48340241608408,0.170870880797853,0.412773735926445,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0,0.158167996790568,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.165458490457098,0.388902376688095,1.03327858782185,0.168956125490778,0,0.2604087696879,0.734015410979976,0.241584120826006,0,2.21207784439725,0,0.616265742988964,1.68897069871134,2.50637373934474,2.38417625737518,2.16351809135944,3.10148007066612,3.63479219813331,3.20068587950999,3.02478555410522,4.48306251402861,4.61816839873581,5.2594605981706,0,0,0,0,0,0,0.183151624267265,0,0,0,1.38097570952153,0.572895513439397,0.343706364687375,0,2.2661816921691,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,1.59609949360412,0.512200817262403,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0
|phase1_expression=1.76163731815273,0,0,0,0,0,0,4.26106967357202,2.25261955442667,3.27690336850791,1.02730780935303,1.03703806693937,7.87523357683546,8.74204024189974,0,0,0,0.157731082679119,0.411343300817216,0.42438965179803,1.02051948181284,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0,1.43752564364972,0,13.7818806982155,6.38578218370682,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.622137673850866,0.810035629990144,1.05162480675691,0.856952953211411,0.441737081903227,0.244981598429908,0.287536413054709,0,1.10115880999389,1.14918604276669,1.53606533256243,1.05509030184155,0.182975287204819,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.745597783301202,0,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,2.07150306917737,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.753613202763113,0,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,1.75668478206928,2.72280718857492,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,0.251308704225729,0.521472960576829,0.511430914660661,1.0389402227978,0.811206315338788,0.101839363850316,0,0,0.210441855886474,1.17108398666433,0.459804208866946,0.360124259610698,0.30140963567143,0.340182495756639,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0.995171334092466,0,0,0,1.24275463521301,1.17263029990548,0.720248245844059,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.853153002140936,0.928946687441754,0.515469845288373,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.203651327845314,0.581857461502877,0.631222379012867,0.885311519739602,0.590440591918409,0.627994911365499,0.863780147452604,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.9266070798535,1.40654023910644,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,1.48340241608408,0.170870880797853,0.412773735926445,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0,0.158167996790568,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.165458490457098,0.388902376688095,1.03327858782185,0.168956125490778,0,0.2604087696879,0.734015410979976,0.241584120826006,0,2.21207784439725,0,0.616265742988964,1.68897069871134,2.50637373934474,2.38417625737518,2.16351809135944,3.10148007066612,3.63479219813331,3.20068587950999,3.02478555410522,4.48306251402861,4.61816839873581,5.2594605981706,0,0,0,0,0,0,0.183151624267265,0,0,0,1.38097570952153,0.572895513439397,0.343706364687375,0,2.2661816921691,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,1.59609949360412,0.512200817262403,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0
|short_description=p5@St8sia1
|short_description=p5@St8sia1
}}
}}

Latest revision as of 21:34, 26 September 2015

Short description:p5@St8sia1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_St8sia1_5end
Coexpression cluster:MCL_coexpression_mm9:822
Association with transcript: 323bp_to_ENSMUST00000032421, NM_011374, uc009epv.1_5end
EntrezGene:St8sia1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@St8sia1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.06e-179
alpha-beta T cell1.06e-179
immature T cell1.06e-179
mature T cell1.06e-179
immature alpha-beta T cell1.06e-179
CD4-positive, alpha-beta T cell1.11e-158
T cell4.05e-1411
pro-T cell4.05e-1411
lymphoid lineage restricted progenitor cell8.91e-1312
thymocyte1.12e-116
double negative thymocyte1.12e-116
naive T cell1.12e-116
double-positive, alpha-beta thymocyte1.12e-116
CD4-positive, alpha-beta thymocyte1.12e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.12e-116
DN4 thymocyte1.12e-116
DN1 thymic pro-T cell1.12e-116
DN2 thymocyte1.12e-116
DN3 thymocyte1.12e-116
immature single positive thymocyte1.12e-116
early T lineage precursor1.12e-116
mature CD4 single-positive thymocyte1.12e-116
resting double-positive thymocyte1.12e-116
double-positive blast1.12e-116
CD69-positive double-positive thymocyte1.12e-116
CD69-positive, CD4-positive single-positive thymocyte1.12e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.12e-116
CD24-positive, CD4 single-positive thymocyte1.12e-116
lymphocyte1.22e-1113
common lymphoid progenitor1.22e-1113
leukocyte1.90e-0817
nongranular leukocyte1.90e-0817

Uber anatomy
Ontology termp-valuen
thymus1.34e-2523
neck1.34e-2523
respiratory system epithelium1.34e-2523
hemolymphoid system gland1.34e-2523
pharyngeal epithelium1.34e-2523
thymic region1.34e-2523
pharyngeal gland1.34e-2523
entire pharyngeal arch endoderm1.34e-2523
thymus primordium1.34e-2523
early pharyngeal endoderm1.34e-2523
pharynx2.52e-2424
gland of gut2.52e-2424
upper respiratory tract2.52e-2424
chordate pharynx2.52e-2424
pharyngeal arch system2.52e-2424
pharyngeal region of foregut2.52e-2424
segment of respiratory tract4.53e-2127
hemopoietic organ2.81e-1929
immune organ2.81e-1929
craniocervical region2.93e-1836
mixed endoderm/mesoderm-derived structure3.87e-1535
anterior region of body2.05e-1443
respiratory tract3.16e-1241
respiratory system8.00e-1242
hemolymphoid system4.34e-1148
immune system4.34e-1148
hematopoietic system1.00e-1045
blood island1.00e-1045
gut epithelium5.22e-0955
endocrine gland7.24e-0860
unilaminar epithelium1.18e-0766
gland6.57e-0765
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