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FFCP PHASE1:Mm9::chr4:33397281..33397362,+: Difference between revisions

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{{FFCP|EntrezGene=24018|HGNC=|MCL_coexpression_id=540|UniProt=Q9DCC1,O55236,Q3TUK6,Q3UA94|association_with_transcript=0bp_to_ENSMUST00000029942,ENSMUST00000108153,ENSMUST00000165807,NM_011884,uc008sfv.1,uc012dbk.1,uc012dbl.1_5end|description=CAGE_peak_1_at_Rngtt_5end|id=chr4:33397281..33397362,+|ontology_enrichment_celltype=CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.28e-09!29;UBERON:0002370!1.13e-07!23;UBERON:0000974!1.13e-07!23;UBERON:0004807!1.13e-07!23;UBERON:0005058!1.13e-07!23;UBERON:0003351!1.13e-07!23;UBERON:0009113!1.13e-07!23;UBERON:0003295!1.13e-07!23;UBERON:0009722!1.13e-07!23;UBERON:0005562!1.13e-07!23;UBERON:0007690!1.13e-07!23;UBERON:0003408!5.12e-07!24;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24;UBERON:0005057!8.11e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.28e-09,29;UBERON:0005057,4.28e-09,29;UBERON:0002370,1.13e-07,23;UBERON:0000974,1.13e-07,23;UBERON:0004807,1.13e-07,23;UBERON:0005058,1.13e-07,23;UBERON:0003351,1.13e-07,23;UBERON:0009113,1.13e-07,23;UBERON:0003295,1.13e-07,23;UBERON:0009722,1.13e-07,23;UBERON:0005562,1.13e-07,23;UBERON:0007690,1.13e-07,23;UBERON:0003408,5.12e-07,24;UBERON:0006562,6.25e-07,24;UBERON:0001557,6.25e-07,24;UBERON:0001042,6.25e-07,24;UBERON:0008814,6.25e-07,24;UBERON:0009145,6.25e-07,24;UBERON:0000077,8.28e-07,35|phase1_expression=16.8156289460034,28.6159834264276,24.1149596876454,37.8080264133538,36.5653882860833,21.1527882608981,17.5209480446644,42.352450088837,62.6509813574917,68.3468416860221,38.5240428507386,35.6581550709154,55.1266350378482,46.8573356965826,45.6360373687458,59.325253345219,44.7719602002014,31.7039476185029,38.3920414096069,34.3755617956405,15.7330086779479,17.6737893137576,20.8959831311148,18.079143775655,17.6645146421721,22.9692785646008,16.3689558540448,20.0388246397877,16.5320374927045,18.3981994724749,13.7472916606289,27.9413496322238,20.9122027778754,0,20.5084650023405,13.4650062740379,14.4960242946282,28.0416192593728,25.7840663692854,28.2702821745851,28.2351114254887,28.0048648832963,37.86980753643,12.7155786155333,11.6583470902442,13.2153661556411,4.69434806608824,7.41285531693518,6.81027166476863,6.61061656852564,6.99932108126813,2.87505128729943,36.2410429084711,57.3036092188962,42.6839124910929,12.0911934936895,17.7650732762029,13.9231464914909,23.2663929988537,21.1596391708813,16.4796164911607,5.08266798103698,3.55717918444456,5.39939830368839,5.93319817540185,6.3943210345149,4.19440154725767,5.76327457982332,27.0629888125127,21.0609263797437,21.6634710191923,12.5686433137674,14.7981922437581,24.4981598429908,20.7984672109573,24.8189072384706,27.5289702498472,22.2175968268227,22.4265538554115,20.3104883104499,22.5974479697952,20.8365348222704,15.355064945076,21.9477417912355,19.4053774676549,23.5702868378934,22.4947255662583,25.9095229697168,15.6753220199691,18.4394606660557,32.4648227345879,15.487629785665,8.83962733820076,10.7940638327563,12.9955283489534,12.9927797258227,13.9039975930434,9.20323741921512,9.09251016110041,9.54016851177919,19.858922188512,11.5493829672886,25.4805239706646,14.2213340630666,12.5564803786504,14.9482320630308,11.62706223534,15.7573754012303,48.1624463583739,25.6804900582147,20.6447538851702,21.9215144384742,19.602317266765,21.4026149584724,20.695612455884,20.2323212040778,12.1125534189843,20.3885093257075,35.384422077995,17.9561203441624,27.1635067706284,28.1227646818429,18.6391761218122,25.1791485429931,24.7147114039877,14.3055950916811,25.7602517687729,16.197373736822,21.3477981482749,25.9137806170343,21.0450277296568,20.7329680986226,22.5971616249959,22.7586757023994,17.2464076984435,20.4423991465375,15.785101396799,20.7759640918855,14.1524744722858,16.2040229032585,21.5999935318088,20.0014830857121,19.2666478891724,22.1536082218501,22.7922272156948,28.953700784376,26.3301846012838,17.074422468775,23.7124792226126,26.8530633838303,23.7534017621331,18.1932457914887,20.8535436919198,21.2433821578522,18.108828003899,23.2870092177637,18.9597560574573,20.0731367549478,17.6181369625267,19.0555710732662,15.4787199587523,15.8454614085693,17.992599904476,17.1184881620241,15.2724441758504,17.4400458562806,17.7060444923749,15.4130251924664,20.0763016894446,14.2825693748813,14.8355921468916,16.0819986167866,19.3204101456125,15.4337381574428,22.9216043934899,23.4622516224768,24.4509899408011,19.0404407997752,20.4756720513825,18.3466970769746,20.6187938115349,16.3363654944907,14.6769508937614,13.1255682017666,16.1339880925134,11.1995289212327,17.5934646160189,12.9321706826748,18.3266241891973,24.268124033664,15.3458015411033,18.9184209591649,15.5527678781527,21.478720370629,18.03323770769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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=24018
|HGNC=
|MCL_coexpression_id=540
|TSSclassifier=NA
|UniProt=Q9DCC1,O55236,Q3TUK6,Q3UA94
|association_with_transcript=0bp_to_ENSMUST00000029942,ENSMUST00000108153,ENSMUST00000165807,NM_011884,uc008sfv.1,uc012dbk.1,uc012dbl.1_5end
|cluster_id=chr4:33397281..33397362,+
|description=CAGE_peak_1_at_Rngtt_5end
|id=chr4:33397281..33397362,+
|ontology_enrichment_celltype=CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.28e-09!29;UBERON:0002370!1.13e-07!23;UBERON:0000974!1.13e-07!23;UBERON:0004807!1.13e-07!23;UBERON:0005058!1.13e-07!23;UBERON:0003351!1.13e-07!23;UBERON:0009113!1.13e-07!23;UBERON:0003295!1.13e-07!23;UBERON:0009722!1.13e-07!23;UBERON:0005562!1.13e-07!23;UBERON:0007690!1.13e-07!23;UBERON:0003408!5.12e-07!24;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24;UBERON:0005057!8.11e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.28e-09,29;UBERON:0005057,4.28e-09,29;UBERON:0002370,1.13e-07,23;UBERON:0000974,1.13e-07,23;UBERON:0004807,1.13e-07,23;UBERON:0005058,1.13e-07,23;UBERON:0003351,1.13e-07,23;UBERON:0009113,1.13e-07,23;UBERON:0003295,1.13e-07,23;UBERON:0009722,1.13e-07,23;UBERON:0005562,1.13e-07,23;UBERON:0007690,1.13e-07,23;UBERON:0003408,5.12e-07,24;UBERON:0006562,6.25e-07,24;UBERON:0001557,6.25e-07,24;UBERON:0001042,6.25e-07,24;UBERON:0008814,6.25e-07,24;UBERON:0009145,6.25e-07,24;UBERON:0000077,8.28e-07,35
|phase1_expression=16.8156289460034,28.6159834264276,24.1149596876454,37.8080264133538,36.5653882860833,21.1527882608981,17.5209480446644,42.352450088837,62.6509813574917,68.3468416860221,38.5240428507386,35.6581550709154,55.1266350378482,46.8573356965826,45.6360373687458,59.325253345219,44.7719602002014,31.7039476185029,38.3920414096069,34.3755617956405,15.7330086779479,17.6737893137576,20.8959831311148,18.079143775655,17.6645146421721,22.9692785646008,16.3689558540448,20.0388246397877,16.5320374927045,18.3981994724749,13.7472916606289,27.9413496322238,20.9122027778754,0,20.5084650023405,13.4650062740379,14.4960242946282,28.0416192593728,25.7840663692854,28.2702821745851,28.2351114254887,28.0048648832963,37.86980753643,12.7155786155333,11.6583470902442,13.2153661556411,4.69434806608824,7.41285531693518,6.81027166476863,6.61061656852564,6.99932108126813,2.87505128729943,36.2410429084711,57.3036092188962,42.6839124910929,12.0911934936895,17.7650732762029,13.9231464914909,23.2663929988537,21.1596391708813,16.4796164911607,5.08266798103698,3.55717918444456,5.39939830368839,5.93319817540185,6.3943210345149,4.19440154725767,5.76327457982332,27.0629888125127,21.0609263797437,21.6634710191923,12.5686433137674,14.7981922437581,24.4981598429908,20.7984672109573,24.8189072384706,27.5289702498472,22.2175968268227,22.4265538554115,20.3104883104499,22.5974479697952,20.8365348222704,15.355064945076,21.9477417912355,19.4053774676549,23.5702868378934,22.4947255662583,25.9095229697168,15.6753220199691,18.4394606660557,32.4648227345879,15.487629785665,8.83962733820076,10.7940638327563,12.9955283489534,12.9927797258227,13.9039975930434,9.20323741921512,9.09251016110041,9.54016851177919,19.858922188512,11.5493829672886,25.4805239706646,14.2213340630666,12.5564803786504,14.9482320630308,11.62706223534,15.7573754012303,48.1624463583739,25.6804900582147,20.6447538851702,21.9215144384742,19.602317266765,21.4026149584724,20.695612455884,20.2323212040778,12.1125534189843,20.3885093257075,35.384422077995,17.9561203441624,27.1635067706284,28.1227646818429,18.6391761218122,25.1791485429931,24.7147114039877,14.3055950916811,25.7602517687729,16.197373736822,21.3477981482749,25.9137806170343,21.0450277296568,20.7329680986226,22.5971616249959,22.7586757023994,17.2464076984435,20.4423991465375,15.785101396799,20.7759640918855,14.1524744722858,16.2040229032585,21.5999935318088,20.0014830857121,19.2666478891724,22.1536082218501,22.7922272156948,28.953700784376,26.3301846012838,17.074422468775,23.7124792226126,26.8530633838303,23.7534017621331,18.1932457914887,20.8535436919198,21.2433821578522,18.108828003899,23.2870092177637,18.9597560574573,20.0731367549478,17.6181369625267,19.0555710732662,15.4787199587523,15.8454614085693,17.992599904476,17.1184881620241,15.2724441758504,17.4400458562806,17.7060444923749,15.4130251924664,20.0763016894446,14.2825693748813,14.8355921468916,16.0819986167866,19.3204101456125,15.4337381574428,22.9216043934899,23.4622516224768,24.4509899408011,19.0404407997752,20.4756720513825,18.3466970769746,20.6187938115349,16.3363654944907,14.6769508937614,13.1255682017666,16.1339880925134,11.1995289212327,17.5934646160189,12.9321706826748,18.3266241891973,24.268124033664,15.3458015411033,18.9184209591649,15.5527678781527,21.478720370629,18.0332377076929,19.7541788009955,19.0073437424273,17.1131400532377,20.4886380282594,17.2703873136135,18.5258498852822,13.2034965396327,15.7119892356189,27.1957522317233,27.5182593158484,25.8591429242582,30.0232979654984,25.3236017740038,25.2079593263606,22.1526025837124,16.8620635846037,20.0429831627299,27.3159592401974,18.2349064357567,22.4667124642484,19.9537313578218,18.6573310062789,13.9908621195376,13.8564892624954,20.4650724712124,26.0743962307241,17.6534889206196,18.0711491182147,21.6083072099942,16.4250112211349,14.2447562936193,19.5467578691677,19.0459633097946,25.9911272911704,17.8611013040154,20.0314578964439,15.4774492682217,15.0791283939272,14.1415477792864,15.7364567366092,17.6599517635029,17.0183625387059,19.9259867206745,9.83609672260053,11.8661335786055,17.0374438484779,16.3984272604588,24.7736907392719,20.0733790280144,18.0466926006739,24.3445816478396,19.02610297872,18.1198631905013,23.7172666767914,22.4924921495265,18.8780313326997,12.8207234640424,17.9175655288934,16.4970122972535,5.30980553359851,15.2951800777638,15.4185014052023,13.7681708221806,7.97315110778086,12.604841065701,16.7978390559344,18.1766864738753,15.329387270543,13.9056173491759,6.32511651449993,12.3762651897824,21.1072555567349,24.6683698822895,10.9954881215341,15.0035924522115,17.9113635978696,16.2315624017884,19.9104314928566,10.0473433207818,18.0697215209057,13.9809166770121,8.60060752414351,19.4565778470946,19.2142667768128,22.1348434486332,17.9058516004705,22.8155850645635,19.8206968908299,20.9530591271876,34.8576596827619,16.9237231729842,19.26023084645,41.8177974550414,46.6127316528696,44.6117437752719,28.7263546689615,32.328785486765,26.6725949442538,6.68269432610579,19.4546636052398,20.5352661798117,19.548966688746,16.0997987931141,20.0893558646483,16.3185859125633,16.2000773221658,14.6583327511057,17.7572513409756,15.5334828271731,13.5286305284206,21.8294157224209,14.7258056506817,18.6673140810286,19.5031333451374,19.767866682421,16.7820851263428,21.0931103447199,28.8363197170705,26.8158374116867,19.0099804130191,42.6615012848041,15.8125667926328,15.2012216603944,22.3463815521807,32.2248052201467,29.4048405076272,39.6644983415897,33.6732121958036,41.8001102785331,40.6182279471149,40.2296478695994,39.4704416995997,44.3536589961919,46.1663763617197,14.7374749349887,21.3106515239102,25.4787352770911,22.8323078255147,13.5232715822533,12.9500908061316,15.3847364384503,19.7218908752741,8.02515366456581,15.8130515932779,22.0956113523445,17.7597609166213,19.5912627871804,17.8121455140367,17.3740596399631,10.8003600037089,16.6618845192962,26.2822597210839,16.5683299760582,24.1824519871132,32.3210147454835,24.5856392285953,27.4710590287172,16.1402135223546,13.7882631337511,23.113659691368,18.3371200942616,22.4643446714271,20.7211713646314,16.4761544928656,20.3716448696962,19.102867523856,24.7137088282795,23.1464939891121,21.4332161077383,22.3656749073571,23.3420156761083,20.6042950401653,20.6078488188156,22.9722399098228,23.6042822191919,18.1211504359964,21.3659232449523,24.5625482884013,22.0844126597276,17.5610853957862,20.7825072035896,20.5064211907251,15.7119836064167,21.4729382804755,21.670986122624,21.6892452879935,24.9448314309405,16.7828751553593,14.9886346762768,15.6734177658424,15.0409737833809,13.390183244819,12.1325280515734,19.9406338633562
|short_description=p1@Rngtt
}}

Latest revision as of 22:13, 26 September 2015

Short description:p1@Rngtt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rngtt_5end
Coexpression cluster:MCL_coexpression_mm9:540
Association with transcript: 0bp_to_ENSMUST00000029942, ENSMUST00000108153, ENSMUST00000165807, NM_011884, uc008sfv.1, uc012dbk.1, uc012dbl.1_5end
EntrezGene:Rngtt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rngtt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.52
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E942.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E762.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F268.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.52
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E455.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E846.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A359.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.77
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.70
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A634.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.90
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H922.97
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I220.04
Ileum epithelium, pool1.CNhs13199.10252-104B916.53
Ileum epithelium, pool2.CNhs13232.10253-104C118.40
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H437.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A236.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I957.30
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C323.27
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.91
Mouse Schwann, donor1.CNhs12507.11728-123D915.68
Mouse Schwann, donor2.CNhs12573.11746-123F918.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H948.16
adrenal gland, adult.CNhs10508.49-24D725.68
adrenal gland, embryo E14.CNhs11038.406-44C520.64
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I119.60
adrenal gland, embryo E18.CNhs11026.1262-18F521.40
adrenal gland, neonate N00.CNhs11191.1311-23C120.70
adrenal gland, neonate N25.CNhs11223.1377-27I320.23
amnion, adult pregnant day17.5.CNhs10488.583-22A812.11
aorta, adult.CNhs10498.46-23H120.39
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F517.96
bone (os femoris), neonate N16.CNhs11225.1525-43A627.16
bone (os femoris), neonate N20.CNhs11195.1350-25C328.12
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B225.18
cerebellum, neonate N30.CNhs11135.1395-42I224.71
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.35
corpora quadrigemina, adult.CNhs10501.16-22A425.91
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F120.73
cortex, adult.CNhs10473.12-14D522.60
cortex, neonate N30.CNhs11107.1392-42F222.76
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B220.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.78
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C621.60
eyeball, embryo E14.CNhs10521.399-16E220.00
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D422.15
eyeball, neonate N00.CNhs11207.633-15C622.79
eyeball, neonate N01.CNhs11140.1532-43E728.95
eyeball, neonate N02.CNhs11205.1551-44G826.33
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E223.71
forelimb, embryo E12.CNhs10600.359-14H226.85
forelimb, embryo E13.CNhs10589.384-1E223.75
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B518.11
gonad, embryo E13.CNhs11044.1564-45I623.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.62
heart, embryo E11.CNhs10586.331-24E919.06
heart, embryo E12.CNhs11015.353-12F515.48
heart, embryo E13.CNhs11013.376-3I915.85
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C817.12
heart, embryo E16.CNhs11021.457-17C615.27
heart, embryo E17.CNhs11025.479-18E517.44
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E315.41
heart, neonate N03.CNhs11221.1349-25I220.08
heart, neonate N10.CNhs11118.749-24G114.28
heart, neonate N16.CNhs11209.782-15G114.84
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D319.32
heart, neonate N30.CNhs11202.1390-42D215.43
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I324.45
intestine, adult.CNhs10496.178-9A319.04
intestine, embryo E12.CNhs11019.1251-16I520.48
intestine, embryo E13.CNhs11010.381-16D518.35
intestine, embryo E15.CNhs10602.976-16D820.62
intestine, embryo E16.CNhs10585.463-22H416.34
intestine, embryo E17.CNhs10582.482-18D314.68
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B817.59
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A518.33
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E315.35
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I915.55
kidney, embryo E15.CNhs10997.434-16F821.48
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I219.75
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G717.11
kidney, neonate N10.CNhs11206.758-6D520.49
kidney, neonate N20.CNhs11113.832-19I117.27
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H113.20
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F827.20
liver, embryo E13.CNhs10524.378-3H627.52
liver, embryo E14.CNhs10594.409-16E125.86
liver, embryo E15.CNhs10520.433-16D730.02
liver, embryo E16.CNhs10523.462-17F525.32
liver, embryo E17.CNhs10510.481-18A325.21
liver, embryo E18.CNhs10579.499-43G422.15
liver, neonate N00.CNhs11117.641-24F416.86
liver, neonate N03.CNhs11123.1345-25G220.04
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B922.47
liver, neonate N20.CNhs11220.823-25A319.95
liver, neonate N25.CNhs11198.1368-26H118.66
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B113.86
lung, embryo E12.CNhs10522.354-16G220.47
lung, embryo E14.CNhs10604.404-26F826.07
lung, embryo E15.CNhs11020.432-17C517.65
lung, embryo E16.CNhs10998.458-17B618.07
lung, embryo E17.CNhs10605.480-44A621.61
lung, embryo E18.CNhs10583.1287-20I616.43
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E519.55
lung, neonate N07.CNhs11111.715-19A319.05
lung, neonate N10.CNhs11219.750-23E625.99
lung, neonate N20.CNhs11109.822-18A417.86
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H215.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C217.02
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I922.49
ovary, adult.CNhs10507.91-2I718.88
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I417.92
oviduct, adult pregnant day01.CNhs10500.988-6G616.50
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F415.30
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E513.77
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E624.67
pituitary gland, embryo E13.CNhs11009.370-44C711.00
pituitary gland, embryo E14.CNhs11037.398-44A515.00
pituitary gland, embryo E15.CNhs10592.427-16B917.91
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F519.91
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G313.98
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C319.46
skin, neonate N00.CNhs11124.650-25G419.21
skin, neonate N03.CNhs11215.662-22H322.13
skin, neonate N06.CNhs11097.693-20I517.91
skin, neonate N10.CNhs11108.762-6C422.82
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C920.95
spleen, adult.CNhs10465.25-2G234.86
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F219.26
spleen, neonate N10.CNhs11116.752-24D141.82
spleen, neonate N20.CNhs11112.824-19H146.61
spleen, neonate N25.CNhs11099.1354-25G344.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.67
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E319.45
stomach, embryo E15.CNhs10603.1252-16G820.54
stomach, embryo E16.CNhs11022.459-17D419.55
stomach, embryo E17.CNhs11006.1035-18D516.10
stomach, embryo E18.CNhs10999.1286-20C620.09
stomach, neonate N03.CNhs11193.1340-24B816.32
stomach, neonate N07.CNhs11210.718-18A916.20
stomach, neonate N25.CNhs11104.1355-25E414.66
stomach, neonate N30.CNhs11134.1386-42I117.76
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F521.83
testis, embryo E15.CNhs11034.443-27C514.73
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I519.50
testis, embryo E18.CNhs11027.503-18G519.77
testis, neonate N00.CNhs11189.1300-22B716.78
testis, neonate N07.CNhs11222.726-26I421.09
testis, neonate N10.CNhs11204.763-44D928.84
testis, neonate N20.CNhs11110.839-18H326.82
testis, neonate N30.CNhs11130.1391-42E219.01
thymus, adult.CNhs10471.38-12B542.66
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I215.20
thymus, embryo E16.CNhs11002.456-26C522.35
thymus, embryo E17.CNhs10581.478-18C132.22
thymus, embryo E18.CNhs10595.1273-19G429.40
thymus, neonate N02.CNhs11181.1541-43F839.66
thymus, neonate N03.CNhs11137.2104-43C733.67
thymus, neonate N06.CNhs11197.681-26C441.80
thymus, neonate N07.CNhs11211.713-19D340.62
thymus, neonate N10.CNhs11194.748-24E440.23
thymus, neonate N20.CNhs11186.820-7A239.47
thymus, neonate N25.CNhs11125.1362-25G744.35
thymus, neonate N30.CNhs11132.1393-42G246.17
tongue, adult.CNhs10499.32-1B414.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.48
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.83
urinary bladder, adult.CNhs10481.879-12E413.52
uterus, adult pregnant day19.CNhs10497.590-15F512.95
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D519.72
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I824.18
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H224.59
whole body, embryo E14.5.CNhs10578.420-27D227.47
whole body, embryo E14.CNhs10519.395-14B116.14
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.94
whole body, embryo E17.5.CNhs10513.490-9F916.78
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C215.04
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B419.94





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.53e-079
alpha-beta T cell3.53e-079
immature T cell3.53e-079
mature T cell3.53e-079
immature alpha-beta T cell3.53e-079
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