FFCP PHASE1:Mm9::chr12:86113838..86113860,-: Difference between revisions
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{{FFCP|EntrezGene=67963|HGNC=|UniProt=Q9Z0J0|association_with_transcript=201bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end|description=CAGE_peak_1_at_Npc2_5end|id=chr12:86113838..86113860,-|ontology_enrichment_celltype=CL:0000219!2.62e-09!54;CL:0000063!9.27e-08!66|ontology_enrichment_celltype_v019_2=CL:0000219,2.62e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!6.53e-09!17;UBERON:0002048!7.13e-08!14;UBERON:0000117!7.13e-08!14;UBERON:0000171!7.13e-08!14;UBERON:0000170!7.13e-08!14;UBERON:0005597!7.13e-08!14;UBERON:0000118!7.13e-08!14;UBERON:0005178!2.23e-07!17;UBERON:0005181!2.23e-07!17;UBERON:0002224!2.23e-07!17;UBERON:0000915!2.23e-07!17;UBERON:0008947!2.23e-07!17;UBERON:0003258!2.23e-07!17;UBERON:0005157!2.83e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.47e-09,20;UBERON:0005153,6.53e-09,17;UBERON:0002048,7.13e-08,14;UBERON:0000117,7.13e-08,14;UBERON:0000171,7.13e-08,14;UBERON:0000170,7.13e-08,14;UBERON:0005597,7.13e-08,14;UBERON:0000118,7.13e-08,14;UBERON:0005178,2.23e-07,17;UBERON:0005181,2.23e-07,17;UBERON:0002224,2.23e-07,17;UBERON:0000915,2.23e-07,17;UBERON:0008947,2.23e-07,17;UBERON:0003258,2.23e-07,17|phase1_expression=131.161905778826,207.64036754542,286.194521576018,51.1164517108543,54.5976345641518,161.331980307326,183.385922867488,345.404890206217,360.559917430419,372.864790430936,53.0775701499065,52.649624936922,499.392529209327,560.364779505773,145.90207567526,101.845059497082,90.2434822785309,157.415620513761,150.688762532707,141.321754048744,190.922186389152,460.114267864902,426.539255663881,226.229285829877,261.755989697641,326.737987581446,336.855880996396,305.322736715905,149.548431112166,169.364247198673,243.460100699525,87.6342329374291,76.2680336604867,63.3926724061755,181.687668823552,167.896991812077,179.056525442098,198.383992969294,342.224880901425,253.909015827292,129.999158854854,129.778642142105,158.761885441187,345.460868524984,330.286041913178,341.580505772889,1251.82615095686,264.246489533101,401.806028221349,433.967534733801,721.769989900369,382.381821210824,89.4281290287735,486.717997289612,439.946783077485,495.224414369198,632.665835384775,711.111815250593,38.0354946416044,50.2541430308431,50.7065122804943,742.747214295538,864.394541820027,2472.47447323064,3443.23267445821,2944.94007645158,712.748662923285,385.370960237519,65.2207661420324,65.882897905865,71.5104868594699,81.9818325238916,118.385537950065,60.3879640129723,60.4784922125071,53.3146896233812,88.092704799511,50.6918732198195,58.3704826373725,33.8947759466598,32.1121629044458,34.9011958273029,84.8716316964198,80.4750532345302,76.3991238884051,50.6761167014708,43.1386192821282,38.7710847316625,237.855973259531,278.859056794039,130.728884404457,135.946972563059,163.873091423568,122.512624501784,132.554389159325,110.662641113042,153.08441794361,745.803091601581,986.667245481696,896.069160958223,142.674384233777,411.92799249996,254.805239706646,120.881339536066,167.131083660657,157.589836325511,139.019222379065,153.120582703259,221.650828401979,156.90334099152,116.235168933311,143.707705763331,129.144678463393,143.940121727755,125.93750534234,126.043591103664,702.280903333356,308.141229596332,201.691205844571,119.060401561293,117.487687820929,161.948334547164,143.521656137954,29.8636412951778,41.889341362691,118.532073616786,320.505458053337,358.141930403064,394.680125288939,49.4309110035915,45.7500602818627,25.00521607046,34.2433910778785,39.3801804288709,49.6613426497349,59.3803022827993,156.934459693337,509.695358589551,2899.23548475112,2431.86608662409,113.465026263478,109.8932059192,95.4329287968351,89.0665473409076,70.6899226182296,65.3379973452734,60.0628054427862,714.280006610422,76.526637491159,74.8860077464564,84.6324907228594,101.706819846395,110.940852441014,97.1623544596845,138.491377802546,136.736541304305,414.305780514809,310.618923887461,323.093898812789,96.5206100015439,119.373764530378,113.259036658978,104.877917864248,112.549140559515,104.593102537642,92.7810439554127,85.5792150464785,102.636735940742,58.7478664191125,75.6812009404629,58.8559557302913,58.1875949952823,95.9434003821891,92.7366353634169,37.2213208958505,41.7792726259895,74.0138073883708,88.3264892656238,98.3258834967428,106.364395712081,110.439414353034,163.565338469531,239.72353126477,290.284305447765,102.02374823207,369.255056491232,239.271118777857,230.391594623653,205.102219649314,95.2748573173475,133.357176772686,139.398891278057,136.371220785266,92.3127981886609,86.7849564682719,100.40010462774,121.608209454101,110.1132372278,131.911416441201,102.884273141783,122.773005171955,124.877929888862,139.629187358047,62.066379326387,83.3410139279981,66.3343231535319,90.4756141392723,105.635595971559,191.987892243191,221.526025837124,157.595440425334,100.21491581365,94.887016308054,153.322070439423,110.14929860944,74.510768994398,98.130385196486,152.452152750824,916.560576416526,164.668036828551,196.698726565525,313.009938169447,486.982265198642,837.531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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67963 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0J0 | |||
|association_with_transcript=201bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end | |||
|cluster_id=chr12:86113838..86113860,- | |||
|description=CAGE_peak_1_at_Npc2_5end | |||
|id=chr12:86113838..86113860,- | |||
|ontology_enrichment_celltype=CL:0000219!2.62e-09!54;CL:0000063!9.27e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.62e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!6.53e-09!17;UBERON:0002048!7.13e-08!14;UBERON:0000117!7.13e-08!14;UBERON:0000171!7.13e-08!14;UBERON:0000170!7.13e-08!14;UBERON:0005597!7.13e-08!14;UBERON:0000118!7.13e-08!14;UBERON:0005178!2.23e-07!17;UBERON:0005181!2.23e-07!17;UBERON:0002224!2.23e-07!17;UBERON:0000915!2.23e-07!17;UBERON:0008947!2.23e-07!17;UBERON:0003258!2.23e-07!17;UBERON:0005157!2.83e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.47e-09,20;UBERON:0005153,6.53e-09,17;UBERON:0002048,7.13e-08,14;UBERON:0000117,7.13e-08,14;UBERON:0000171,7.13e-08,14;UBERON:0000170,7.13e-08,14;UBERON:0005597,7.13e-08,14;UBERON:0000118,7.13e-08,14;UBERON:0005178,2.23e-07,17;UBERON:0005181,2.23e-07,17;UBERON:0002224,2.23e-07,17;UBERON:0000915,2.23e-07,17;UBERON:0008947,2.23e-07,17;UBERON:0003258,2.23e-07,17 | |||
|phase1_expression=131.161905778826,207.64036754542,286.194521576018,51.1164517108543,54.5976345641518,161.331980307326,183.385922867488,345.404890206217,360.559917430419,372.864790430936,53.0775701499065,52.649624936922,499.392529209327,560.364779505773,145.90207567526,101.845059497082,90.2434822785309,157.415620513761,150.688762532707,141.321754048744,190.922186389152,460.114267864902,426.539255663881,226.229285829877,261.755989697641,326.737987581446,336.855880996396,305.322736715905,149.548431112166,169.364247198673,243.460100699525,87.6342329374291,76.2680336604867,63.3926724061755,181.687668823552,167.896991812077,179.056525442098,198.383992969294,342.224880901425,253.909015827292,129.999158854854,129.778642142105,158.761885441187,345.460868524984,330.286041913178,341.580505772889,1251.82615095686,264.246489533101,401.806028221349,433.967534733801,721.769989900369,382.381821210824,89.4281290287735,486.717997289612,439.946783077485,495.224414369198,632.665835384775,711.111815250593,38.0354946416044,50.2541430308431,50.7065122804943,742.747214295538,864.394541820027,2472.47447323064,3443.23267445821,2944.94007645158,712.748662923285,385.370960237519,65.2207661420324,65.882897905865,71.5104868594699,81.9818325238916,118.385537950065,60.3879640129723,60.4784922125071,53.3146896233812,88.092704799511,50.6918732198195,58.3704826373725,33.8947759466598,32.1121629044458,34.9011958273029,84.8716316964198,80.4750532345302,76.3991238884051,50.6761167014708,43.1386192821282,38.7710847316625,237.855973259531,278.859056794039,130.728884404457,135.946972563059,163.873091423568,122.512624501784,132.554389159325,110.662641113042,153.08441794361,745.803091601581,986.667245481696,896.069160958223,142.674384233777,411.92799249996,254.805239706646,120.881339536066,167.131083660657,157.589836325511,139.019222379065,153.120582703259,221.650828401979,156.90334099152,116.235168933311,143.707705763331,129.144678463393,143.940121727755,125.93750534234,126.043591103664,702.280903333356,308.141229596332,201.691205844571,119.060401561293,117.487687820929,161.948334547164,143.521656137954,29.8636412951778,41.889341362691,118.532073616786,320.505458053337,358.141930403064,394.680125288939,49.4309110035915,45.7500602818627,25.00521607046,34.2433910778785,39.3801804288709,49.6613426497349,59.3803022827993,156.934459693337,509.695358589551,2899.23548475112,2431.86608662409,113.465026263478,109.8932059192,95.4329287968351,89.0665473409076,70.6899226182296,65.3379973452734,60.0628054427862,714.280006610422,76.526637491159,74.8860077464564,84.6324907228594,101.706819846395,110.940852441014,97.1623544596845,138.491377802546,136.736541304305,414.305780514809,310.618923887461,323.093898812789,96.5206100015439,119.373764530378,113.259036658978,104.877917864248,112.549140559515,104.593102537642,92.7810439554127,85.5792150464785,102.636735940742,58.7478664191125,75.6812009404629,58.8559557302913,58.1875949952823,95.9434003821891,92.7366353634169,37.2213208958505,41.7792726259895,74.0138073883708,88.3264892656238,98.3258834967428,106.364395712081,110.439414353034,163.565338469531,239.72353126477,290.284305447765,102.02374823207,369.255056491232,239.271118777857,230.391594623653,205.102219649314,95.2748573173475,133.357176772686,139.398891278057,136.371220785266,92.3127981886609,86.7849564682719,100.40010462774,121.608209454101,110.1132372278,131.911416441201,102.884273141783,122.773005171955,124.877929888862,139.629187358047,62.066379326387,83.3410139279981,66.3343231535319,90.4756141392723,105.635595971559,191.987892243191,221.526025837124,157.595440425334,100.21491581365,94.887016308054,153.322070439423,110.14929860944,74.510768994398,98.130385196486,152.452152750824,916.560576416526,164.668036828551,196.698726565525,313.009938169447,486.982265198642,837.531287209079,1257.58455480081,1340.56816078308,452.728133872981,478.806659020651,392.099276128761,800.963882330527,899.343385557584,1243.69260568384,2833.36822521893,2647.18896314566,400.787882510515,290.561393858883,70.6422595946285,103.849554320692,569.837870129324,111.087207969924,238.208705659274,218.255258061821,172.769564981705,274.814117645435,241.95936005348,217.402775645823,242.886421004937,260.399969398979,209.107234533711,29.2402397943844,159.540655774094,188.571474283623,134.3817414667,177.837792564393,84.9568885375762,125.27480825597,130.603776608772,121.650276442554,154.442889976644,157.406795747291,141.101848069849,140.324019578317,123.704590299498,66.0516824085855,72.7388399167491,101.072832383223,117.451663985057,104.43543453816,134.144955082716,114.027302636807,97.1824480359659,111.480511001294,106.29866730897,147.361035371466,1047.5745047964,868.93515468339,317.7814215972,110.803561976675,122.874428715584,76.3561629590453,89.1711409703429,79.6083363763547,127.377125607245,81.2162822806032,173.263073129023,168.205297390026,142.970175129417,112.644337288805,100.06017469179,113.931530256848,174.737826033683,199.290868108889,190.715963850105,137.472568994176,88.7322461995085,98.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| |||
|short_description=p1@Npc2 | |||
}} |
Latest revision as of 22:28, 26 September 2015
Short description: | p1@Npc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Npc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 201bp_to_ENSMUST00000021668, NM_023409, uc007oft.1_5end |
EntrezGene: | Npc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.62e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 2.47e-09 | 20 |
epithelial bud | 6.53e-09 | 17 |
lung | 7.13e-08 | 14 |
respiratory tube | 7.13e-08 | 14 |
respiration organ | 7.13e-08 | 14 |
pair of lungs | 7.13e-08 | 14 |
lung primordium | 7.13e-08 | 14 |
lung bud | 7.13e-08 | 14 |
thoracic cavity element | 2.23e-07 | 17 |
thoracic segment organ | 2.23e-07 | 17 |
thoracic cavity | 2.23e-07 | 17 |
thoracic segment of trunk | 2.23e-07 | 17 |
respiratory primordium | 2.23e-07 | 17 |
endoderm of foregut | 2.23e-07 | 17 |