FFCP PHASE1:Mm9::chr11:114529884..114529921,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:114529884..114529921,+
|short_description=p1@Rpl38
|description=CAGE_peak_1_at_Rpl38_5end
|association_with_transcript=-1bp_to_ENSMUST00000106599_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67671 | |EntrezGene=67671 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=776 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJI8 | |UniProt=Q9JJI8 | ||
|association_with_transcript=-1bp_to_ENSMUST00000106599_5end | |||
|cluster_id=chr11:114529884..114529921,+ | |||
|description=CAGE_peak_1_at_Rpl38_5end | |||
|id=chr11:114529884..114529921,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.11e-22!115;CL:0000004!6.11e-22!115;CL:0000255!6.11e-22!115;CL:0000034!1.46e-21!97;CL:0000144!1.86e-21!121;CL:0000012!1.86e-21!121;CL:0000219!1.27e-20!54;CL:0002371!2.04e-20!118;CL:0000723!2.32e-19!91;CL:0000048!2.32e-19!91;CL:0002320!2.00e-17!46;CL:0000134!2.00e-17!46;CL:0000988!2.17e-14!32;CL:0002032!2.17e-14!32;CL:0000037!2.17e-14!32;CL:0000566!2.17e-14!32;CL:0000837!2.17e-14!32;CL:0000063!7.06e-13!66;CL:0002031!3.44e-11!25;CL:0000738!3.91e-10!17;CL:0002087!3.91e-10!17;CL:0000838!2.84e-08!12;CL:0000542!5.11e-08!13;CL:0000051!5.11e-08!13;CL:0000049!1.08e-07!19;CL:0000084!1.32e-07!11;CL:0000827!1.32e-07!11;CL:0000055!2.66e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.46e-21,97;CL:0000219,1.27e-20,54;CL:0000723,2.32e-19,91;CL:0000048,2.32e-19,91;CL:0002320,2.00e-17,46;CL:0000134,2.00e-17,46;CL:0000988,2.17e-14,32;CL:0002032,2.17e-14,32;CL:0000037,2.17e-14,32;CL:0000837,2.17e-14,32;CL:0002031,3.44e-11,25;CL:0000738,3.91e-10,17;CL:0002087,3.91e-10,17;CL:0000838,2.84e-08,12;CL:0000542,5.11e-08,13;CL:0000051,5.11e-08,13;CL:0000049,1.08e-07,19;CL:0000084,1.32e-07,11;CL:0000827,1.32e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.00e-17!46;UBERON:0002371!1.82e-09!16;UBERON:0002390!1.48e-07!45;UBERON:0003061!1.48e-07!45;UBERON:0002193!1.57e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-17,46;UBERON:0002371,1.82e-09,16;UBERON:0002390,1.48e-07,45;UBERON:0003061,1.48e-07,45;UBERON:0002193,1.57e-07,48;UBERON:0002405,1.57e-07,48 | |||
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|phase1_expression=284.104054763905,122.141392673776,124.214792353343,116.751185564436,144.257970224548,193.061162698673,358.128178032941,733.678723795036,1284.83787835611,1049.77940055414,1067.20159594957,714.439455962233,966.428120461656,759.858137825925,460.02458106743,503.151039463717,595.327158287053,837.078855778084,761.259335379062,896.735334249238,244.07424273357,554.738544359346,783.338167627667,428.459708240743,500.341642007498,255.533224031184,285.595203453467,213.101049126344,412.9208904787,299.915854414318,303.105608065802,303.544661913704,401.02224150514,110.937176710807,419.412551878851,522.6417250071,428.34730943845,153.601108480445,264.872681793568,242.391493459869,112.940445701955,121.582096322603,154.392292263907,425.783038393402,484.378977366841,541.279372124799,1495.93225039345,897.609568818298,414.987199185417,570.457323883948,1095.39374921846,800.701783512892,1187.22972046454,1040.16931164427,1054.66234170905,540.759334547561,673.926650735956,514.12507600061,425.269200726875,479.794818199734,542.559681401289,1189.00546303058,1028.02478430448,896.300118412273,1034.35421524506,1070.69353322377,788.84709099496,831.064194410523,340.516686821041,501.007037148904,464.1871897025,486.749277424081,502.255062123969,483.471184501424,516.702934259312,670.110495438705,268.682749638508,292.531691553165,306.752246912718,408.31994681268,465.214667718253,421.939830150976,466.235608332306,543.628681290603,368.702171885443,272.826070148616,305.387255314076,366.274911046716,375.601918932593,309.692253317607,323.198904902371,310.61301959028,421.582226898805,367.537873505353,271.606542493126,237.006223274491,242.968846827931,393.864475477891,907.432514077821,871.688730317009,261.827917364849,505.606321012412,310.862392442108,248.873346103666,1098.69203313191,1038.26872871695,1328.01271705384,256.685361608447,197.828543106439,171.153786341743,375.595732448684,374.797003802246,343.386475414271,345.154846865506,228.945212793217,154.067240970182,228.408150186561,117.559277175888,187.537437013373,219.032314828792,194.561377763607,294.31927865308,266.540218541915,152.538795243016,95.717145013749,267.718993858604,858.235736835907,1194.40633740787,683.891962107234,203.11610703294,228.292800806495,268.397696113078,193.987941334581,109.957646652042,252.046898050746,209.12898809434,362.955492762527,239.483418424429,492.303933428798,174.456298529887,321.397494117878,301.631561016716,294.581644361551,334.715400413123,187.780737657665,184.868098371038,206.799706103322,130.127795481725,295.328150317994,227.494614441887,278.178727303203,411.21119403413,347.002967033546,296.014341543842,346.125553438161,436.880215666593,770.327866482619,910.754243278977,651.586904114094,319.802192794815,308.870820995104,404.959576225822,255.921059167612,305.771616135466,323.03533438617,318.106436418558,360.022904678289,350.179261759141,245.358736220999,234.759473633106,143.816068134348,164.76738582835,190.349949957341,193.391449433696,193.046172781869,243.883931338904,108.70777960167,167.661659264687,338.915030100487,371.346438304841,235.311984374142,301.71855283652,380.488833018573,256.804595251955,228.24847860291,327.421521991334,200.816831831415,207.113687394838,170.398612142111,196.841450495275,225.215847969431,218.258835486786,462.600010424566,385.702978570444,305.437963674048,347.021862648415,408.076033000685,262.448238029572,153.095656377827,148.791029163439,155.27174183512,203.235128979205,193.880018114995,264.115802348577,241.374445999013,295.918539898467,244.446446273146,265.294875727659,355.966940790425,405.651553805643,353.616929596352,321.236853430055,70.4464211984037,160.392748445125,213.745806083474,186.403211924968,185.138130754613,103.725357093124,238.88587488542,310.197441068284,231.899161477003,368.346836132158,383.249175455124,271.025124540858,387.773091003316,258.161816115868,170.561225922899,227.444236269292,146.220022858916,218.593661830795,186.499780415167,213.35736140773,836.891625862961,769.626542603474,375.216140313525,317.327258250442,208.073564624178,181.326479158138,723.280979001892,174.96235255263,305.09644817552,305.713536784268,218.008478505593,249.005487466559,286.296296195876,288.171908343031,254.221120651834,300.439021932829,218.989428982374,211.750747521971,221.994293265732,490.570738103288,344.180145114106,244.485722245298,662.398240316415,469.780530959889,507.601252143817,618.247451439834,524.456161756252,570.599634583929,164.877251041325,308.276602596925,377.887221087805,433.286395130004,481.763041187744,576.527686757364,365.632136579568,360.12218806262,418.345983353428,359.657544783012,236.217191211508,402.400052510271,368.096159086945,370.229378123353,231.386304150818,274.746195910375,403.12591164447,261.83936967107,210.872541264853,189.02070672484,203.291101837341,136.236946788401,246.884268625484,187.279555030615,336.273893410174,356.017347236559,336.498456230766,321.921693021017,279.539695689496,264.46756822674,475.089711832826,440.147317557904,416.258321098924,438.193813668937,268.727426547174,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| ||
|short_description=p1@Rpl38 | |||
}} | }} |
Latest revision as of 22:35, 26 September 2015
Short description: | p1@Rpl38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpl38_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | -1bp_to_ENSMUST00000106599_5end |
EntrezGene: | Rpl38 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.46e-21 | 97 |
motile cell | 1.27e-20 | 54 |
somatic stem cell | 2.32e-19 | 91 |
multi fate stem cell | 2.32e-19 | 91 |
connective tissue cell | 2.00e-17 | 46 |
mesenchymal cell | 2.00e-17 | 46 |
hematopoietic cell | 2.17e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.17e-14 | 32 |
hematopoietic stem cell | 2.17e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.17e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 3.44e-11 | 25 |
leukocyte | 3.91e-10 | 17 |
nongranular leukocyte | 3.91e-10 | 17 |
lymphoid lineage restricted progenitor cell | 2.84e-08 | 12 |
lymphocyte | 5.11e-08 | 13 |
common lymphoid progenitor | 5.11e-08 | 13 |
common myeloid progenitor | 1.08e-07 | 19 |
T cell | 1.32e-07 | 11 |
pro-T cell | 1.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.00e-17 | 46 |
bone marrow | 1.82e-09 | 16 |
hematopoietic system | 1.48e-07 | 45 |
blood island | 1.48e-07 | 45 |
hemolymphoid system | 1.57e-07 | 48 |
immune system | 1.57e-07 | 48 |