FFCP PHASE1:Mm9::chr12:87027598..87027652,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:87027598..87027652,+ to FFCP PHASE1:Mm9::chr12:87027598..87027652,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=53314 | |EntrezGene=53314 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=316 | |||
|TSSclassifier=NA | |||
|UniProt=O35284 | |UniProt=O35284 | ||
|association_with_transcript=0bp_to_ENSMUST00000040536_5end | |||
|cluster_id=chr12:87027598..87027652,+ | |||
|description=CAGE_peak_1_at_Batf_5end | |||
|id=chr12:87027598..87027652,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.22e-11!32;CL:0002032!5.22e-11!32;CL:0000037!5.22e-11!32;CL:0000566!5.22e-11!32;CL:0000837!5.22e-11!32;CL:0002320!6.54e-09!46;CL:0000134!6.54e-09!46;CL:0000738!7.27e-09!17;CL:0002087!7.27e-09!17;CL:0002031!1.36e-08!25;CL:0000838!2.52e-08!12;CL:0000084!7.55e-08!11;CL:0000827!7.55e-08!11;CL:0000542!3.54e-07!13;CL:0000051!3.54e-07!13;CL:0000219!5.33e-07!54;CL:0000791!8.38e-07!9;CL:0000789!8.38e-07!9;CL:0002420!8.38e-07!9;CL:0002419!8.38e-07!9;CL:0000790!8.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.26e-12,32;CL:0002032,1.26e-12,32;CL:0000037,1.26e-12,32;CL:0000837,1.26e-12,32;CL:0002320,2.47e-11,46;CL:0000134,2.47e-11,46;CL:0002031,5.69e-10,25;CL:0000738,1.69e-09,17;CL:0002087,1.69e-09,17;CL:0000219,2.00e-09,54;CL:0000838,6.80e-09,12;CL:0000084,2.23e-08,11;CL:0000827,2.23e-08,11;CL:0000542,1.13e-07,13;CL:0000051,1.13e-07,13;CL:0000791,3.03e-07,9;CL:0000789,3.03e-07,9;CL:0002420,3.03e-07,9;CL:0002419,3.03e-07,9;CL:0000790,3.03e-07,9;CL:0000624,9.97e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.31e-17!48;UBERON:0002390!1.28e-15!45;UBERON:0003061!1.28e-15!45;UBERON:0002405!3.44e-15!70;UBERON:0000926!1.92e-10!193;UBERON:0004120!1.92e-10!193;UBERON:0006603!1.92e-10!193;UBERON:0003081!3.59e-10!88;UBERON:0001041!2.61e-09!92;UBERON:0002384!6.54e-09!46;UBERON:0002371!6.79e-09!16;UBERON:0000077!1.30e-08!97;UBERON:0001004!1.36e-08!42;UBERON:0000065!2.59e-08!41;UBERON:0004177!4.69e-08!29;UBERON:0001474!5.58e-08!22;UBERON:0004765!5.58e-08!22;UBERON:0001434!5.58e-08!22;UBERON:0002204!3.32e-07!32;UBERON:0005057!4.09e-07!51;UBERON:0003104!4.84e-07!131;UBERON:0009142!4.84e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.78e-19,48;UBERON:0002405,3.78e-19,48;UBERON:0002390,1.24e-17,45;UBERON:0003061,1.24e-17,45;UBERON:0002384,2.47e-11,46;UBERON:0003081,2.18e-10,87;UBERON:0001041,6.84e-10,80;UBERON:0002371,1.65e-09,16;UBERON:0001004,2.15e-09,42;UBERON:0004177,2.63e-09,29;UBERON:0005057,2.63e-09,29;UBERON:0000065,4.33e-09,41;UBERON:0001474,2.44e-08,22;UBERON:0004765,2.44e-08,22;UBERON:0001434,2.44e-08,22;UBERON:0002204,3.67e-08,32;UBERON:0000077,1.28e-07,35;UBERON:0003408,2.90e-07,24;UBERON:0006562,5.62e-07,24;UBERON:0001557,5.62e-07,24;UBERON:0001042,5.62e-07,24;UBERON:0008814,5.62e-07,24;UBERON:0009145,5.62e-07,24;UBERON:0002370,5.73e-07,23;UBERON:0000974,5.73e-07,23;UBERON:0004807,5.73e-07,23;UBERON:0005058,5.73e-07,23;UBERON:0003351,5.73e-07,23;UBERON:0009113,5.73e-07,23;UBERON:0003295,5.73e-07,23;UBERON:0009722,5.73e-07,23;UBERON:0005562,5.73e-07,23;UBERON:0007690,5.73e-07,23 | |||
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| ||
|short_description=p1@Batf | |||
}} | }} |
Latest revision as of 22:56, 26 September 2015
Short description: | p1@Batf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Batf_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_ENSMUST00000040536_5end |
EntrezGene: | Batf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.26e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.26e-12 | 32 |
hematopoietic stem cell | 1.26e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.26e-12 | 32 |
connective tissue cell | 2.47e-11 | 46 |
mesenchymal cell | 2.47e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 5.69e-10 | 25 |
leukocyte | 1.69e-09 | 17 |
nongranular leukocyte | 1.69e-09 | 17 |
motile cell | 2.00e-09 | 54 |
lymphoid lineage restricted progenitor cell | 6.80e-09 | 12 |
T cell | 2.23e-08 | 11 |
pro-T cell | 2.23e-08 | 11 |
lymphocyte | 1.13e-07 | 13 |
common lymphoid progenitor | 1.13e-07 | 13 |
mature alpha-beta T cell | 3.03e-07 | 9 |
alpha-beta T cell | 3.03e-07 | 9 |
immature T cell | 3.03e-07 | 9 |
mature T cell | 3.03e-07 | 9 |
immature alpha-beta T cell | 3.03e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.97e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.78e-19 | 48 |
immune system | 3.78e-19 | 48 |
hematopoietic system | 1.24e-17 | 45 |
blood island | 1.24e-17 | 45 |
connective tissue | 2.47e-11 | 46 |
lateral plate mesoderm | 2.18e-10 | 87 |
foregut | 6.84e-10 | 80 |
bone marrow | 1.65e-09 | 16 |
respiratory system | 2.15e-09 | 42 |
hemopoietic organ | 2.63e-09 | 29 |
immune organ | 2.63e-09 | 29 |
respiratory tract | 4.33e-09 | 41 |
bone element | 2.44e-08 | 22 |
skeletal element | 2.44e-08 | 22 |
skeletal system | 2.44e-08 | 22 |
musculoskeletal system | 3.67e-08 | 32 |
mixed endoderm/mesoderm-derived structure | 1.28e-07 | 35 |
gland of gut | 2.90e-07 | 24 |
pharynx | 5.62e-07 | 24 |
upper respiratory tract | 5.62e-07 | 24 |
chordate pharynx | 5.62e-07 | 24 |
pharyngeal arch system | 5.62e-07 | 24 |
pharyngeal region of foregut | 5.62e-07 | 24 |
thymus | 5.73e-07 | 23 |
neck | 5.73e-07 | 23 |
respiratory system epithelium | 5.73e-07 | 23 |
hemolymphoid system gland | 5.73e-07 | 23 |
pharyngeal epithelium | 5.73e-07 | 23 |
thymic region | 5.73e-07 | 23 |
pharyngeal gland | 5.73e-07 | 23 |
entire pharyngeal arch endoderm | 5.73e-07 | 23 |
thymus primordium | 5.73e-07 | 23 |
early pharyngeal endoderm | 5.73e-07 | 23 |