FFCP PHASE1:Mm9::chr7:56809246..56809272,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:56809246..56809272,+ to FFCP PHASE1:Mm9::chr7:56809246..56809272,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78286 | |EntrezGene=78286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc012flb.1_5end | |||
|cluster_id=chr7:56809246..56809272,+ | |||
|description=CAGE_peak_9_at_Nav2_5end | |||
|id=chr7:56809246..56809272,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-12,3;CL:0002202,1.18e-12,3;CL:0000069,1.18e-12,3;CL:0002632,1.18e-12,3;CL:0002368,1.18e-12,3;CL:0000307,1.18e-12,3;CL:0000377,1.18e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!4.57e-19!17;UBERON:0005181!4.57e-19!17;UBERON:0002224!4.57e-19!17;UBERON:0000915!4.57e-19!17;UBERON:0008947!4.57e-19!17;UBERON:0003258!4.57e-19!17;UBERON:0002048!5.55e-16!14;UBERON:0000117!5.55e-16!14;UBERON:0000171!5.55e-16!14;UBERON:0000170!5.55e-16!14;UBERON:0005597!5.55e-16!14;UBERON:0000118!5.55e-16!14;UBERON:0005153!8.19e-14!17;UBERON:0005157!3.96e-11!27;UBERON:0000310!3.07e-07!6;UBERON:0001443!3.07e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.35e-60,17;UBERON:0005181,1.35e-60,17;UBERON:0002224,1.35e-60,17;UBERON:0000915,1.35e-60,17;UBERON:0008947,1.35e-60,17;UBERON:0003258,1.35e-60,17;UBERON:0002048,4.31e-49,14;UBERON:0000117,4.31e-49,14;UBERON:0000171,4.31e-49,14;UBERON:0000170,4.31e-49,14;UBERON:0005597,4.31e-49,14;UBERON:0000118,4.31e-49,14;UBERON:0005153,4.75e-40,17;UBERON:0005157,1.03e-33,20;UBERON:0000065,1.45e-23,41;UBERON:0001004,6.15e-23,42;UBERON:0000310,4.30e-17,6;UBERON:0001443,4.30e-17,6;UBERON:0009569,1.40e-13,66;UBERON:0003126,1.18e-12,3;UBERON:0001005,1.18e-12,3;UBERON:0007196,1.18e-12,3;UBERON:0001558,1.18e-12,3;UBERON:0005177,7.11e-11,79;UBERON:0001041,1.06e-10,80;UBERON:0002100,3.41e-09,90;UBERON:0001048,4.23e-09,134;UBERON:0005911,3.84e-08,69;UBERON:0000025,1.48e-07,114;UBERON:0004111,7.34e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68034769719064,3.54703811665138,5.05524445014783,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0,0,0.696504333044333,0,0,0,0,0,1.03562886267751,1.40715635988658,1.08037236876609,0.23674473558521,0,0.771335564436891,0.465067889500816,0.536546802799238,1.28441876603886,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,15.3345147838282,0.37898282354097,3.91115943460862,4.75286240170527,3.52035372432753,6.365237782789,7.61739650835244,13.0739544064725,16.3940549870439,14.8381342064679,11.9591076493115,10.651115456523,9.49767400262426,8.82359257347221,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0,1.21443210502468,0.584511715822624,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.561849044819294,0.320125762024346,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.715308569841963,0.145346416632329,0.470546902076653,0.507687647350059,0.914639864363863,0.789209134313529,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.77468420592983,0.578719832943424,0.499621155875892,0,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68034769719064,3.54703811665138,5.05524445014783,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0,0,0.696504333044333,0,0,0,0,0,1.03562886267751,1.40715635988658,1.08037236876609,0.23674473558521,0,0.771335564436891,0.465067889500816,0.536546802799238,1.28441876603886,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,15.3345147838282,0.37898282354097,3.91115943460862,4.75286240170527,3.52035372432753,6.365237782789,7.61739650835244,13.0739544064725,16.3940549870439,14.8381342064679,11.9591076493115,10.651115456523,9.49767400262426,8.82359257347221,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0,1.21443210502468,0.584511715822624,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.561849044819294,0.320125762024346,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.715308569841963,0.145346416632329,0.470546902076653,0.507687647350059,0.914639864363863,0.789209134313529,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.77468420592983,0.578719832943424,0.499621155875892,0,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p9@Nav2 | |||
}} | }} |
Latest revision as of 23:13, 26 September 2015
Short description: | p9@Nav2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nav2_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 0bp_to_uc012flb.1_5end |
EntrezGene: | Nav2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-12 | 3 |
branched duct epithelial cell | 1.18e-12 | 3 |
epithelial cell of lower respiratory tract | 1.18e-12 | 3 |
respiratory epithelial cell | 1.18e-12 | 3 |
tracheal epithelial cell | 1.18e-12 | 3 |
tracheoblast | 1.18e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.35e-60 | 17 |
thoracic segment organ | 1.35e-60 | 17 |
thoracic cavity | 1.35e-60 | 17 |
thoracic segment of trunk | 1.35e-60 | 17 |
respiratory primordium | 1.35e-60 | 17 |
endoderm of foregut | 1.35e-60 | 17 |
lung | 4.31e-49 | 14 |
respiratory tube | 4.31e-49 | 14 |
respiration organ | 4.31e-49 | 14 |
pair of lungs | 4.31e-49 | 14 |
lung primordium | 4.31e-49 | 14 |
lung bud | 4.31e-49 | 14 |
epithelial bud | 4.75e-40 | 17 |
epithelial fold | 1.03e-33 | 20 |
respiratory tract | 1.45e-23 | 41 |
respiratory system | 6.15e-23 | 42 |
breast | 4.30e-17 | 6 |
chest | 4.30e-17 | 6 |
subdivision of trunk | 1.40e-13 | 66 |
trachea | 1.18e-12 | 3 |
respiratory airway | 1.18e-12 | 3 |
tracheobronchial tree | 1.18e-12 | 3 |
lower respiratory tract | 1.18e-12 | 3 |
trunk region element | 7.11e-11 | 79 |
foregut | 1.06e-10 | 80 |
trunk | 3.41e-09 | 90 |
primordium | 4.23e-09 | 134 |
endo-epithelium | 3.84e-08 | 69 |
tube | 1.48e-07 | 114 |
anatomical conduit | 7.34e-07 | 122 |