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FFCP PHASE1:Mm9::chr6:18120560..18120620,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:18120560..18120620,+
|DHSsupport=NA
|short_description=p1@Cftr
|DPIdataset=NA
|description=CAGE_peak_1_at_Cftr_5end
|association_with_transcript=-66bp_to_ENSMUST00000045706,ENSMUST00000115405,ENSMUST00000140407,NM_021050,uc009bai.1_5end
|EntrezGene=12638
|EntrezGene=12638
|HGNC=
|HGNC=
|MCL_coexpression_id=412
|TSSclassifier=NA
|UniProt=P26361
|UniProt=P26361
|association_with_transcript=-66bp_to_ENSMUST00000045706,ENSMUST00000115405,ENSMUST00000140407,NM_021050,uc009bai.1_5end
|cluster_id=chr6:18120560..18120620,+
|description=CAGE_peak_1_at_Cftr_5end
|id=chr6:18120560..18120620,+
|ontology_enrichment_celltype=CL:0002563!8.92e-08!9;CL:0002251!8.92e-08!9
|ontology_enrichment_celltype_v019_2=CL:0002563,2.55e-10,9;CL:0002251,2.55e-10,9;CL:0000239,2.65e-07,6;CL:0000677,2.65e-07,6;CL:0000584,2.65e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.03e-14!43;UBERON:0005409!3.46e-13!59;UBERON:0000344!1.20e-11!15;UBERON:0001242!2.48e-10!13;UBERON:0000060!2.48e-10!13;UBERON:0001262!2.48e-10!13;UBERON:0004786!2.48e-10!13;UBERON:0003350!8.92e-08!9;UBERON:0004808!8.92e-08!9;UBERON:0001277!8.92e-08!9;UBERON:0002048!2.23e-07!14;UBERON:0000117!2.23e-07!14;UBERON:0000171!2.23e-07!14;UBERON:0000170!2.23e-07!14;UBERON:0005597!2.23e-07!14;UBERON:0000118!2.23e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.35e-29,31;UBERON:0005409,1.03e-22,47;UBERON:0000344,9.09e-16,15;UBERON:0001242,6.51e-14,13;UBERON:0001262,6.51e-14,13;UBERON:0004786,6.51e-14,13;UBERON:0001007,1.65e-11,116;UBERON:0001555,1.65e-11,116;UBERON:0007026,1.65e-11,116;UBERON:0004119,5.14e-11,118;UBERON:0000925,5.14e-11,118;UBERON:0006595,5.14e-11,118;UBERON:0004921,2.39e-10,114;UBERON:0003350,2.55e-10,9;UBERON:0004808,2.55e-10,9;UBERON:0001277,2.55e-10,9;UBERON:0002048,9.25e-10,14;UBERON:0000117,9.25e-10,14;UBERON:0000171,9.25e-10,14;UBERON:0000170,9.25e-10,14;UBERON:0005597,9.25e-10,14;UBERON:0000118,9.25e-10,14;UBERON:0000485,7.35e-08,11;UBERON:0004923,1.09e-07,24;UBERON:0005153,2.68e-07,17;UBERON:0005178,2.68e-07,17;UBERON:0005181,2.68e-07,17;UBERON:0002224,2.68e-07,17;UBERON:0000915,2.68e-07,17;UBERON:0008947,2.68e-07,17;UBERON:0003258,2.68e-07,17
|phase1_expression=0,16.7508195666893,23.2049612088663,41.4375969490357,49.5886772646884,24.342494427224,24.2957146219347,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.12608225377674,0,0,25.2788028013583,18.5821517664408,16.0784949952206,21.5380998079537,18.5305260109865,31.9239344686708,22.9347418081537,22.8382425974964,0,0,0,30.3294200738838,24.7689621584154,33.6879437832909,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,4.45317130904334,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,0,0.578397427679647,0,0.161766849947409,0,0,18.6391761218122,0,0.209446706813455,27.3339049073193,0,0,0,0.449371918214468,0.915001205637253,1.00523481690292,0.173824320192276,0.511430914660661,0,0.486723789203273,1.32391173005411,2.23932547098167,8.59257378674494,0,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.640568601424249,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,8.92130714056255,20.0982430664294,1.49301775374664,2.78684006232526,9.14958975386863,15.1262643467507,11.3412802360884,14.6473732106671,20.404749646414,14.1641101062649,15.3314477368164,17.5081695396213,14.622306533934,33.2563181202062,27.8818084338356,31.0660386276813,0.758671603812327,2.97046132785295,5.63538678365402,4.88763186828754,4.46090720485539,3.7873342740772,2.40298841072178,2.06654207171443,2.66897837330337,2.71473760627961,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,1.51593129416388,3.7481944581666,3.73439188705414,5.16318546234705,7.20276906999808,8.56957107189649,5.07347484430277,6.14777062014145,4.87222317227305,5.89982644032702,5.07976275618788,4.48980952851328,5.64131328467895,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.642642632843614,4.68402281187286,1.6025904330053,2.76907830901079,5.77395430403874,0,0,0,0.565815239267694,0,0,3.87642439752332,1.09060118843252,0.712994756769443,0,1.05418608574999,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0,0,0,0.301564624640779,0.238744688006273,0.492422699235184,31.4799303560239,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,3.65975040828328,4.42821897369385,3.13632444021703,3.71216358368502,0.539457385539283,0.661227645802687,1.83229159388821,28.1264492043191,11.8054469486516,0,0.149516546043979,0.165458490457098,0,0,0.675824501963113,0.352071715937262,0.5208175393758,0.419437377702843,0,0,0,0,0.308132871494482,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,2.25218970541418,12.2711588259068,1.92931541171159,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.419226325255965,0.551530525350042,2.22246727801615,1.85431551515005,1.60459604795908,2.27427490587418,2.02783439912192,1.13175804831646,1.68554713445788,1.72867911493147,1.60819313075717,0.952587382566147,1.50649623728312,0.964546102318525,2.47251540481984,2.06078488188156,2.40008476669791,1.24233064311536,2.14592570952589,1.16277133305863,1.78807822789128,1.35383372626682,3.47563148458268,2.36762740294059,1.90125759384206,2.24456908663095,2.25406534435931,1.67457620038458,2.04615521584845,2.78886314134739,1.15743966588685,0.749431733813838,1.40358965067245,1.93383948643468,0.191288332068843,0.220591419119515,0
|phase1_expression=0,16.7508195666893,23.2049612088663,41.4375969490357,49.5886772646884,24.342494427224,24.2957146219347,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.12608225377674,0,0,25.2788028013583,18.5821517664408,16.0784949952206,21.5380998079537,18.5305260109865,31.9239344686708,22.9347418081537,22.8382425974964,0,0,0,30.3294200738838,24.7689621584154,33.6879437832909,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,4.45317130904334,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,0,0.578397427679647,0,0.161766849947409,0,0,18.6391761218122,0,0.209446706813455,27.3339049073193,0,0,0,0.449371918214468,0.915001205637253,1.00523481690292,0.173824320192276,0.511430914660661,0,0.486723789203273,1.32391173005411,2.23932547098167,8.59257378674494,0,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.640568601424249,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,8.92130714056255,20.0982430664294,1.49301775374664,2.78684006232526,9.14958975386863,15.1262643467507,11.3412802360884,14.6473732106671,20.404749646414,14.1641101062649,15.3314477368164,17.5081695396213,14.622306533934,33.2563181202062,27.8818084338356,31.0660386276813,0.758671603812327,2.97046132785295,5.63538678365402,4.88763186828754,4.46090720485539,3.7873342740772,2.40298841072178,2.06654207171443,2.66897837330337,2.71473760627961,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,1.51593129416388,3.7481944581666,3.73439188705414,5.16318546234705,7.20276906999808,8.56957107189649,5.07347484430277,6.14777062014145,4.87222317227305,5.89982644032702,5.07976275618788,4.48980952851328,5.64131328467895,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.642642632843614,4.68402281187286,1.6025904330053,2.76907830901079,5.77395430403874,0,0,0,0.565815239267694,0,0,3.87642439752332,1.09060118843252,0.712994756769443,0,1.05418608574999,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0,0,0,0.301564624640779,0.238744688006273,0.492422699235184,31.4799303560239,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,3.65975040828328,4.42821897369385,3.13632444021703,3.71216358368502,0.539457385539283,0.661227645802687,1.83229159388821,28.1264492043191,11.8054469486516,0,0.149516546043979,0.165458490457098,0,0,0.675824501963113,0.352071715937262,0.5208175393758,0.419437377702843,0,0,0,0,0.308132871494482,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,2.25218970541418,12.2711588259068,1.92931541171159,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.419226325255965,0.551530525350042,2.22246727801615,1.85431551515005,1.60459604795908,2.27427490587418,2.02783439912192,1.13175804831646,1.68554713445788,1.72867911493147,1.60819313075717,0.952587382566147,1.50649623728312,0.964546102318525,2.47251540481984,2.06078488188156,2.40008476669791,1.24233064311536,2.14592570952589,1.16277133305863,1.78807822789128,1.35383372626682,3.47563148458268,2.36762740294059,1.90125759384206,2.24456908663095,2.25406534435931,1.67457620038458,2.04615521584845,2.78886314134739,1.15743966588685,0.749431733813838,1.40358965067245,1.93383948643468,0.191288332068843,0.220591419119515,0
|short_description=p1@Cftr
}}
}}

Latest revision as of 23:43, 26 September 2015

Short description:p1@Cftr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cftr_5end
Coexpression cluster:MCL_coexpression_mm9:412
Association with transcript: -66bp_to_ENSMUST00000045706, ENSMUST00000115405, ENSMUST00000140407, NM_021050, uc009bai.1_5end
EntrezGene:Cftr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cftr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I449.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.58
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I121.54
GP2+ M cell, pool3.CNhs13240.11847-124I218.53
Ileum epithelium, pool1.CNhs13199.10252-104B931.92
Ileum epithelium, pool2.CNhs13232.10253-104C122.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.77
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A320.10
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F714.65
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E914.16
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A514.62
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E327.88
intestine, neonate N30.CNhs11131.1384-42G131.07
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G73.79
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H25.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I131.48
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I128.13
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E512.27
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell2.55e-109
epithelial cell of alimentary canal2.55e-109
brush border epithelial cell2.65e-076
gut absorptive cell2.65e-076
enterocyte2.65e-076

Uber anatomy
Ontology termp-valuen
intestine3.35e-2931
gastrointestinal system1.03e-2247
mucosa9.09e-1615
intestinal mucosa6.51e-1413
wall of intestine6.51e-1413
gastrointestinal system mucosa6.51e-1413
digestive system1.65e-11116
digestive tract1.65e-11116
primitive gut1.65e-11116
endoderm-derived structure5.14e-11118
endoderm5.14e-11118
presumptive endoderm5.14e-11118
subdivision of digestive tract2.39e-10114
epithelium of mucosa2.55e-109
gastrointestinal system epithelium2.55e-109
intestinal epithelium2.55e-109
lung9.25e-1014
respiratory tube9.25e-1014
respiration organ9.25e-1014
pair of lungs9.25e-1014
lung primordium9.25e-1014
lung bud9.25e-1014
simple columnar epithelium7.35e-0811
organ component layer1.09e-0724
epithelial bud2.68e-0717
thoracic cavity element2.68e-0717
thoracic segment organ2.68e-0717
thoracic cavity2.68e-0717
thoracic segment of trunk2.68e-0717
respiratory primordium2.68e-0717
endoderm of foregut2.68e-0717
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