FFCP PHASE1:Mm9::chr9:63869751..63869767,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:63869751..63869767,-
|short_description=p1@Smad6
|description=CAGE_peak_1_at_Smad6_5end
|association_with_transcript=98bp_to_ENSMUST00000041029,NM_008542,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17130 | |EntrezGene=17130 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1855 | |||
|TSSclassifier=NA | |||
|UniProt=O35182 | |UniProt=O35182 | ||
|association_with_transcript=98bp_to_ENSMUST00000041029,NM_008542,uc009qbk.2_5end | |||
|cluster_id=chr9:63869751..63869767,- | |||
|description=CAGE_peak_1_at_Smad6_5end | |||
|id=chr9:63869751..63869767,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.03e-10!23;UBERON:0001009!2.03e-10!23;UBERON:0007100!1.04e-09!18;UBERON:0000948!1.04e-09!18;UBERON:0005498!1.04e-09!18;UBERON:0004140!1.04e-09!18;UBERON:0009881!1.04e-09!18;UBERON:0004141!1.04e-09!18;UBERON:0003084!1.04e-09!18;UBERON:0007005!1.04e-09!18;UBERON:0004139!1.04e-09!18;UBERON:0004291!1.04e-09!18;UBERON:0002048!8.66e-08!14;UBERON:0000117!8.66e-08!14;UBERON:0000171!8.66e-08!14;UBERON:0000170!8.66e-08!14;UBERON:0005597!8.66e-08!14;UBERON:0000118!8.66e-08!14;UBERON:0004872!1.49e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.88e-11,23;UBERON:0001009,5.88e-11,23;UBERON:0007100,3.34e-10,18;UBERON:0000948,3.34e-10,18;UBERON:0005498,3.34e-10,18;UBERON:0004140,3.34e-10,18;UBERON:0009881,3.34e-10,18;UBERON:0004141,3.34e-10,18;UBERON:0003084,3.34e-10,18;UBERON:0007005,3.34e-10,18;UBERON:0004139,3.34e-10,18;UBERON:0004291,3.34e-10,18;UBERON:0002048,3.61e-08,14;UBERON:0000117,3.61e-08,14;UBERON:0000171,3.61e-08,14;UBERON:0000170,3.61e-08,14;UBERON:0005597,3.61e-08,14;UBERON:0000118,3.61e-08,14;UBERON:0004872,7.91e-08,33 | |||
|phase1_expression=4.32401887182944,4.18770489167233,2.72999543633722,0.90739263392049,2.50447864973174,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.297872853602656,0.261199789138935,0.799962113967033,0.68822784320151,2.8711598205751,2.15380998079537,1.50829862880122,2.28028103347649,2.77233142735924,2.43903561720835,0.635030673459631,0,0,0.288851619751275,1.82858109894342,1.02084678131185,0.418531630736908,0,0,0,0,0,3.77690453926732,2.02753862439029,1.83546752161682,25.8189143634853,1.74420125104357,6.37089929929968,3.30530828426282,3.3596741190087,2.87505128729943,0,0,0,14.9210472900849,23.2092086350393,30.4246534443691,0.404632921719196,0,0.633831403506179,5.42151251310611,7.11435836888911,4.49949858640699,4.94433181283487,7.104801149461,1.49800055259202,4.61061966385865,0.933206510776299,0.675029691658453,0.841299845405528,0.856952953211411,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0.510749352340751,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,1.68828783009504,2.59757021220577,0.294628585473668,0.854230084794618,0.559198337475902,1.59025005999687,0.604572480854284,18.8411917656091,4.30211938490693,0,1.61910957491345,0.649776417447669,0,1.12355536105401,7.6693645160126,7.79358013808606,5.65343319216544,7.32385782838739,20.5322363862909,17.8363667794652,42.6640021891999,1.08245520505607,0,1.51657333504435,0.91347103775248,0.258937883647172,0.890652834388949,2.08182392119363,0.608930956624282,1.61430848079241,2.11011696773672,1.76383060703557,1.25666591329675,1.23597483867187,3.03658649531814,0.884610551949874,0.808834249737046,2.20841518460394,1.93950101254089,0,0,0,2.29911349687732,0.239630249011841,0,0.508280908292259,0,0.457500602818626,0.376963056338593,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,2.64782346010822,1.24406970610093,0,0.631325567659422,3.25301107406759,1.14951052216736,2.52086981727489,4.21973489940002,1.90502197623718,0.768682321709099,1.78033276663485,0.776110112217047,3.88022387279116,3.78212160335639,4.04687585577082,2.41115305670332,2.78047249225598,1.0447564995665,2.05782136407943,7.16523360546575,0,0,0,12.2204205795946,12.6644072389792,8.64297895012871,7.57583153872673,7.87056926989615,7.86762275725629,6.27841650826101,9.92611585178591,5.7215017759913,4.11399624783701,4.59668899421467,3.81023404865522,3.65499968563331,1.53685080703735,3.89198614405078,0.630869845692382,0.617427674275707,2.64335026387038,1.85115396664481,4.69234151177515,4.41249676534833,2.83508414908605,5.24377164020691,3.7804267453628,3.80451252225118,1.89811624617805,2.14108641141214,4.77536896720512,5.17286827306992,6.43381487493096,4.49409704327111,0.864552199498777,2.38969527905241,3.03468641524931,2.51346727741403,1.1270773567308,2.24016460629846,3.49114476901726,3.71719845418688,3.22506339333712,1.62371162777562,1.255989822731,1.35736880313981,0.592905254174298,1.66845105716094,1.96558995113203,1.34917267430912,1.82574109249653,1.68824011826692,1.78238096246994,1.15078454980324,2.59416362840057,1.09824565275233,2.87536413054709,1.86070473834252,2.49630138491648,1.51547326768267,0.717589654087649,1.4473305640901,16.2582807346612,5.30575952957357,3.25929952884052,3.22515662972857,3.05097322775053,3.51763140627813,4.04674189506223,13.0739544064725,6.30540576424764,8.19419351700467,11.799652880654,17.6972379892997,13.8147985492716,15.7667473853848,0,0,0,0,0.481651769963376,0.117211686592203,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0,0.963963949265421,0.709700426041343,4.09550888434687,3.4206261464251,1.64970122972535,0,1.45668381692989,3.32555912661226,1.32023555829129,1.47650946440386,1.53717573971964,1.29214146584111,1.45413491791002,3.20847640546249,1.58018378967908,0,0,0,4.68158844481407,4.91562998374467,6.21577401591618,1.95074257006501,4.45922044005176,3.1264313914403,4.26250928760439,2.58138878870081,4.44847348814022,3.52845436887939,0.49465875882444,0.484393280087717,1.08563264870681,3.22305328808468,3.77524069413641,4.08073171281791,0.556275906031529,0.170870880797853,2.68302928352189,1.48155621895769,0.565105371014073,0.136694227721025,0.228778173206523,2.03974115992626,1.95932033253121,1.24379976423981,2.86401185404534,2.84702394223022,2.84647253977588,3.13215488383224,1.46361807210128,3.27543845619266,2.83215127408124,3.14083131756277,3.40282724579238,2.07383957266869,0,0,5.83114529571517,3.30916980914195,1.36115831840833,2.84151611651008,0.844780627453891,3.52071715937262,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,0,3.04087822935246,1.95150818613172,0.389762468933385,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,1.13365191807606,1.55390167361845,3.3194126945506,1.34307693091263,2.12508553435409,0.563047426353546,2.19781949120718,0.428736758158132,1.50471631210609,0.5647518426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| |phase1_expression=4.32401887182944,4.18770489167233,2.72999543633722,0.90739263392049,2.50447864973174,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.297872853602656,0.261199789138935,0.799962113967033,0.68822784320151,2.8711598205751,2.15380998079537,1.50829862880122,2.28028103347649,2.77233142735924,2.43903561720835,0.635030673459631,0,0,0.288851619751275,1.82858109894342,1.02084678131185,0.418531630736908,0,0,0,0,0,3.77690453926732,2.02753862439029,1.83546752161682,25.8189143634853,1.74420125104357,6.37089929929968,3.30530828426282,3.3596741190087,2.87505128729943,0,0,0,14.9210472900849,23.2092086350393,30.4246534443691,0.404632921719196,0,0.633831403506179,5.42151251310611,7.11435836888911,4.49949858640699,4.94433181283487,7.104801149461,1.49800055259202,4.61061966385865,0.933206510776299,0.675029691658453,0.841299845405528,0.856952953211411,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0.510749352340751,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,1.68828783009504,2.59757021220577,0.294628585473668,0.854230084794618,0.559198337475902,1.59025005999687,0.604572480854284,18.8411917656091,4.30211938490693,0,1.61910957491345,0.649776417447669,0,1.12355536105401,7.6693645160126,7.79358013808606,5.65343319216544,7.32385782838739,20.5322363862909,17.8363667794652,42.6640021891999,1.08245520505607,0,1.51657333504435,0.91347103775248,0.258937883647172,0.890652834388949,2.08182392119363,0.608930956624282,1.61430848079241,2.11011696773672,1.76383060703557,1.25666591329675,1.23597483867187,3.03658649531814,0.884610551949874,0.808834249737046,2.20841518460394,1.93950101254089,0,0,0,2.29911349687732,0.239630249011841,0,0.508280908292259,0,0.457500602818626,0.376963056338593,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,2.64782346010822,1.24406970610093,0,0.631325567659422,3.25301107406759,1.14951052216736,2.52086981727489,4.21973489940002,1.90502197623718,0.768682321709099,1.78033276663485,0.776110112217047,3.88022387279116,3.78212160335639,4.04687585577082,2.41115305670332,2.78047249225598,1.0447564995665,2.05782136407943,7.16523360546575,0,0,0,12.2204205795946,12.6644072389792,8.64297895012871,7.57583153872673,7.87056926989615,7.86762275725629,6.27841650826101,9.92611585178591,5.7215017759913,4.11399624783701,4.59668899421467,3.81023404865522,3.65499968563331,1.53685080703735,3.89198614405078,0.630869845692382,0.617427674275707,2.64335026387038,1.85115396664481,4.69234151177515,4.41249676534833,2.83508414908605,5.24377164020691,3.7804267453628,3.80451252225118,1.89811624617805,2.14108641141214,4.77536896720512,5.17286827306992,6.43381487493096,4.49409704327111,0.864552199498777,2.38969527905241,3.03468641524931,2.51346727741403,1.1270773567308,2.24016460629846,3.49114476901726,3.71719845418688,3.22506339333712,1.62371162777562,1.255989822731,1.35736880313981,0.592905254174298,1.66845105716094,1.96558995113203,1.34917267430912,1.82574109249653,1.68824011826692,1.78238096246994,1.15078454980324,2.59416362840057,1.09824565275233,2.87536413054709,1.86070473834252,2.49630138491648,1.51547326768267,0.717589654087649,1.4473305640901,16.2582807346612,5.30575952957357,3.25929952884052,3.22515662972857,3.05097322775053,3.51763140627813,4.04674189506223,13.0739544064725,6.30540576424764,8.19419351700467,11.799652880654,17.6972379892997,13.8147985492716,15.7667473853848,0,0,0,0,0.481651769963376,0.117211686592203,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0,0.963963949265421,0.709700426041343,4.09550888434687,3.4206261464251,1.64970122972535,0,1.45668381692989,3.32555912661226,1.32023555829129,1.47650946440386,1.53717573971964,1.29214146584111,1.45413491791002,3.20847640546249,1.58018378967908,0,0,0,4.68158844481407,4.91562998374467,6.21577401591618,1.95074257006501,4.45922044005176,3.1264313914403,4.26250928760439,2.58138878870081,4.44847348814022,3.52845436887939,0.49465875882444,0.484393280087717,1.08563264870681,3.22305328808468,3.77524069413641,4.08073171281791,0.556275906031529,0.170870880797853,2.68302928352189,1.48155621895769,0.565105371014073,0.136694227721025,0.228778173206523,2.03974115992626,1.95932033253121,1.24379976423981,2.86401185404534,2.84702394223022,2.84647253977588,3.13215488383224,1.46361807210128,3.27543845619266,2.83215127408124,3.14083131756277,3.40282724579238,2.07383957266869,0,0,5.83114529571517,3.30916980914195,1.36115831840833,2.84151611651008,0.844780627453891,3.52071715937262,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,0,3.04087822935246,1.95150818613172,0.389762468933385,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,1.13365191807606,1.55390167361845,3.3194126945506,1.34307693091263,2.12508553435409,0.563047426353546,2.19781949120718,0.428736758158132,1.50471631210609,0.5647518426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| ||
|short_description=p1@Smad6 | |||
}} | }} |
Latest revision as of 23:46, 26 September 2015
Short description: | p1@Smad6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Smad6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1855 |
Association with transcript: | 98bp_to_ENSMUST00000041029, NM_008542, uc009qbk.2_5end |
EntrezGene: | Smad6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.88e-11 | 23 |
circulatory system | 5.88e-11 | 23 |
primary circulatory organ | 3.34e-10 | 18 |
heart | 3.34e-10 | 18 |
primitive heart tube | 3.34e-10 | 18 |
primary heart field | 3.34e-10 | 18 |
anterior lateral plate mesoderm | 3.34e-10 | 18 |
heart tube | 3.34e-10 | 18 |
heart primordium | 3.34e-10 | 18 |
cardiac mesoderm | 3.34e-10 | 18 |
cardiogenic plate | 3.34e-10 | 18 |
heart rudiment | 3.34e-10 | 18 |
lung | 3.61e-08 | 14 |
respiratory tube | 3.61e-08 | 14 |
respiration organ | 3.61e-08 | 14 |
pair of lungs | 3.61e-08 | 14 |
lung primordium | 3.61e-08 | 14 |
lung bud | 3.61e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 7.91e-08 | 33 |