FFCP PHASE1:Mm9::chr4:43571258..43571293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21894 | |EntrezGene=21894 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1803 | |||
|TSSclassifier=NA | |||
|UniProt=A2AIM2 | |UniProt=A2AIM2 | ||
|association_with_transcript=38bp_to_ENSMUST00000130353_5end | |association_with_transcript=38bp_to_ENSMUST00000130353_5end | ||
|cluster_id=chr4:43571258..43571293,- | |||
|description=CAGE_peak_11_at_Tln1_5end | |description=CAGE_peak_11_at_Tln1_5end | ||
|id=chr4:43571258..43571293,- | |id=chr4:43571258..43571293,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.16e-13,7;CL:0000680,3.82e-12,6;CL:0000187,3.82e-12,6;CL:0000056,3.82e-12,6;CL:0000355,9.38e-08,9;CL:0000192,3.90e-07,3;CL:0000359,3.90e-07,3;CL:0002539,3.90e-07,3;CL:0000514,3.90e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.84e-11!23;UBERON:0001009!7.84e-11!23;UBERON:0004872!5.12e-09!33;UBERON:0007100!1.42e-07!18;UBERON:0000948!1.42e-07!18;UBERON:0005498!1.42e-07!18;UBERON:0004140!1.42e-07!18;UBERON:0009881!1.42e-07!18;UBERON:0004141!1.42e-07!18;UBERON:0003084!1.42e-07!18;UBERON:0007005!1.42e-07!18;UBERON:0004139!1.42e-07!18;UBERON:0004291!1.42e-07!18;UBERON:0005153!1.57e-07!17;UBERON:0002048!2.90e-07!14;UBERON:0000117!2.90e-07!14;UBERON:0000171!2.90e-07!14;UBERON:0000170!2.90e-07!14;UBERON:0005597!2.90e-07!14;UBERON:0000118!2.90e-07!14;UBERON:0005157!5.56e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.85e-10,23;UBERON:0001009,1.85e-10,23;UBERON:0000055,8.80e-10,5;UBERON:0007500,8.80e-10,5;UBERON:0001981,8.80e-10,5;UBERON:0002049,8.80e-10,5;UBERON:0007798,8.80e-10,5;UBERON:0004537,8.80e-10,5;UBERON:0006965,8.80e-10,5;UBERON:0000947,1.05e-08,4;UBERON:0001637,1.05e-08,4;UBERON:0004573,1.05e-08,4;UBERON:0003509,1.05e-08,4;UBERON:0004571,1.05e-08,4;UBERON:0010191,1.05e-08,4;UBERON:0004572,1.05e-08,4;UBERON:0001134,9.38e-08,9;UBERON:0002036,9.38e-08,9;UBERON:0002385,9.38e-08,9;UBERON:0000486,9.38e-08,9;UBERON:0007503,9.38e-08,9;UBERON:0001015,9.38e-08,9;UBERON:0002329,9.38e-08,9;UBERON:0003082,9.38e-08,9;UBERON:0003059,9.38e-08,9;UBERON:0007282,9.38e-08,9;UBERON:0004290,9.38e-08,9;UBERON:0009618,9.38e-08,9;UBERON:0005153,1.31e-07,17;UBERON:0001135,3.90e-07,3;UBERON:0004237,3.90e-07,3;UBERON:0004695,3.90e-07,3;UBERON:0002111,3.90e-07,3;UBERON:0004178,3.90e-07,3;UBERON:0000383,7.05e-07,10 | |||
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| ||
|short_description=p11@Tln1 | |short_description=p11@Tln1 | ||
}} | }} |
Latest revision as of 00:19, 27 September 2015
Short description: | p11@Tln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Tln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1803 |
Association with transcript: | 38bp_to_ENSMUST00000130353_5end |
EntrezGene: | Tln1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.16e-13 | 7 |
muscle precursor cell | 3.82e-12 | 6 |
muscle cell | 3.82e-12 | 6 |
myoblast | 3.82e-12 | 6 |
multi-potent skeletal muscle stem cell | 9.38e-08 | 9 |
smooth muscle cell | 3.90e-07 | 3 |
vascular associated smooth muscle cell | 3.90e-07 | 3 |
aortic smooth muscle cell | 3.90e-07 | 3 |
smooth muscle myoblast | 3.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.85e-10 | 23 |
circulatory system | 1.85e-10 | 23 |
vessel | 8.80e-10 | 5 |
epithelial tube open at both ends | 8.80e-10 | 5 |
blood vessel | 8.80e-10 | 5 |
vasculature | 8.80e-10 | 5 |
vascular system | 8.80e-10 | 5 |
blood vasculature | 8.80e-10 | 5 |
vascular cord | 8.80e-10 | 5 |
aorta | 1.05e-08 | 4 |
artery | 1.05e-08 | 4 |
systemic artery | 1.05e-08 | 4 |
arterial blood vessel | 1.05e-08 | 4 |
systemic arterial system | 1.05e-08 | 4 |
aortic system | 1.05e-08 | 4 |
arterial system | 1.05e-08 | 4 |
skeletal muscle tissue | 9.38e-08 | 9 |
striated muscle tissue | 9.38e-08 | 9 |
muscle tissue | 9.38e-08 | 9 |
multilaminar epithelium | 9.38e-08 | 9 |
epithelial vesicle | 9.38e-08 | 9 |
musculature | 9.38e-08 | 9 |
somite | 9.38e-08 | 9 |
myotome | 9.38e-08 | 9 |
presomitic mesoderm | 9.38e-08 | 9 |
presumptive segmental plate | 9.38e-08 | 9 |
dermomyotome | 9.38e-08 | 9 |
trunk paraxial mesoderm | 9.38e-08 | 9 |
epithelial bud | 1.31e-07 | 17 |
smooth muscle tissue | 3.90e-07 | 3 |
blood vessel smooth muscle | 3.90e-07 | 3 |
arterial system smooth muscle | 3.90e-07 | 3 |
artery smooth muscle tissue | 3.90e-07 | 3 |
aorta smooth muscle tissue | 3.90e-07 | 3 |
musculature of body | 7.05e-07 | 10 |