FFCP PHASE1:Mm9::chr2:78709309..78709320,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:78709309..78709320,+
|short_description=p9@Ube2e3
|description=CAGE_peak_9_at_Ube2e3_5end
|association_with_transcript=-76bp_to_ENSMUST00000153614_5end
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22193 | |EntrezGene=22193 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENSMUST00000153614_5end | |||
|cluster_id=chr2:78709309..78709320,+ | |||
|description=CAGE_peak_9_at_Ube2e3_5end | |||
|id=chr2:78709309..78709320,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.87e-11!33;CL:0000047!8.87e-11!33;CL:0000031!8.87e-11!33;CL:0000404!8.87e-11!33;CL:0000393!2.26e-08!39;CL:0000211!2.26e-08!39;CL:0000221!3.29e-08!44;CL:0000133!3.29e-08!44;CL:0000117!3.80e-08!23;CL:0000337!3.80e-08!23;CL:0002319!1.01e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.80e-14,33;CL:0000047,4.80e-14,33;CL:0000031,4.80e-14,33;CL:0000404,4.80e-14,33;CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0000393,4.52e-11,39;CL:0000211,4.52e-11,39;CL:0000221,1.68e-10,44;CL:0000133,1.68e-10,44;CL:0002319,1.45e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-09!73;UBERON:0005743!1.31e-09!73;UBERON:0000073!4.06e-09!75;UBERON:0001016!4.06e-09!75;UBERON:0002346!9.29e-09!71;UBERON:0003075!9.29e-09!71;UBERON:0007284!9.29e-09!71;UBERON:0004121!2.71e-08!102;UBERON:0000924!2.71e-08!102;UBERON:0006601!2.71e-08!102;UBERON:0003056!1.39e-07!49;UBERON:0000033!6.17e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.62e-13,95;UBERON:0000924,1.62e-13,95;UBERON:0006601,1.62e-13,95;UBERON:0002346,5.93e-12,64;UBERON:0003075,5.93e-12,64;UBERON:0007284,5.93e-12,64;UBERON:0001017,1.12e-11,73;UBERON:0010371,1.47e-11,73;UBERON:0001016,3.71e-11,75;UBERON:0003056,1.49e-09,49;UBERON:0010314,2.33e-08,92;UBERON:0002020,4.87e-08,34;UBERON:0001049,9.05e-08,52;UBERON:0005068,9.05e-08,52;UBERON:0006241,9.05e-08,52;UBERON:0007135,9.05e-08,52;UBERON:0000073,2.69e-07,54;UBERON:0000020,3.80e-07,12;UBERON:0001032,3.80e-07,12;UBERON:0004456,3.80e-07,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0.159544317990673,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0.935476191661768,0.0992909512008853,0.261199789138935,0,0,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.41621522601718,1.5869729378161,3.1691570175309,0,0.889294796111139,0,0,0,0.599200221036809,0,0.933206510776299,0.810035629990144,1.26194976810829,1.71390590642282,1.32521124570968,1.5923803897944,1.91690942036473,2.75765635983006,0,0.383062014255563,0.307213066512487,2.1101806036831,3.84248103130121,2.6045668527838,0.558365998002762,0,0.763991238884051,0.589257170947335,1.28134512719193,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,1.69012103732017,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0,0,0,0,1.25668024088073,0,0.599075622529601,1.19980546198682,0.635351135365324,0.748953197024114,0,2.26177833803156,0.173824320192276,0.511430914660661,0,0.648965052271031,1.32391173005411,0.248813941220186,0.252722758433675,0,1.30120442962704,1.14951052216736,1.26043490863744,0.753524089178575,1.83698547708585,1.0249097622788,2.43624483855295,0.258703370739016,1.29340795759705,1.13463648100692,1.58356011747554,0.657587197282725,0.834141747676794,0,0.205782136407943,0.995171334092466,1.40442637462647,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.233530684734339,0.987359099480883,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,0,1.3377599609307,0.330418782983798,0,1.06644125267617,0.232236671860439,0.644337306610467,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.596869416123452,0,0.898819408654221,0,0,0.189667900953082,0.799739588268102,0,0,0.581857461502877,0.771494018793504,0.69560190836683,0,0.156998727841375,0.493588655687202,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.509235257325564,0.938760993154008,0,0.714130922658041,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.703270119553219,0.163934945376675,0.504941854408746,0.94652465824877,2.34263246577983,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,1.21443210502468,1.16902343164525,1.18586333383957,1.92792789853084,0.425820255624806,0.35613120733451,1.14020871547503,0.494910368917606,0,1.69946445308487,0.604647113929502,0.943025398779491,0.590603785761546,0.922305443831782,0,0,0.356497378384721,0,0,0,0.340439605753788,1.26042765821917,1.03486947026204,1.28602221018955,0.532020700926821,1.07021290561242,0.987294123612726,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0,0.619160603889667,0.370389054739423,0.188368457004691,0,0,1.5298058699447,1.25956307091292,0.967399816630967,0,1.10717597753397,0,0.216010681643603,0.209088296014469,0.655087691238533,0.809186078308924,0.495920734352016,0.26175594198403,0.259229946583586,0,1.69107881605257,1.19613236835183,0.66183396182839,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,1.17183946359555,0.524296722128554,0,0.864090018773596,0,0.810900861160657,0.410843828659309,0.909445760844565,0.716106782669926,0,0.480781798079875,0.443068581523732,0.403865799792591,0.381034033274999,1.00826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0,0,0,0.214368379079066,1.00314420807073,1.12950368523413,0,2.29158205375759,0.859265911718438,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,1.764384908931,0,0.682934423016537,0.243106717068294,0.419226325255965,1.2869045591501,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0,0.883193520806384,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,0.526139422875686,0.135804113845862,0,0.474540072496697,0.591026894253381,0,0.77468420592983,0.385813221962283,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0,0.231867835620421 | |phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0.159544317990673,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0.935476191661768,0.0992909512008853,0.261199789138935,0,0,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.41621522601718,1.5869729378161,3.1691570175309,0,0.889294796111139,0,0,0,0.599200221036809,0,0.933206510776299,0.810035629990144,1.26194976810829,1.71390590642282,1.32521124570968,1.5923803897944,1.91690942036473,2.75765635983006,0,0.383062014255563,0.307213066512487,2.1101806036831,3.84248103130121,2.6045668527838,0.558365998002762,0,0.763991238884051,0.589257170947335,1.28134512719193,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,1.69012103732017,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0,0,0,0,1.25668024088073,0,0.599075622529601,1.19980546198682,0.635351135365324,0.748953197024114,0,2.26177833803156,0.173824320192276,0.511430914660661,0,0.648965052271031,1.32391173005411,0.248813941220186,0.252722758433675,0,1.30120442962704,1.14951052216736,1.26043490863744,0.753524089178575,1.83698547708585,1.0249097622788,2.43624483855295,0.258703370739016,1.29340795759705,1.13463648100692,1.58356011747554,0.657587197282725,0.834141747676794,0,0.205782136407943,0.995171334092466,1.40442637462647,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.233530684734339,0.987359099480883,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,0,1.3377599609307,0.330418782983798,0,1.06644125267617,0.232236671860439,0.644337306610467,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.596869416123452,0,0.898819408654221,0,0,0.189667900953082,0.799739588268102,0,0,0.581857461502877,0.771494018793504,0.69560190836683,0,0.156998727841375,0.493588655687202,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.509235257325564,0.938760993154008,0,0.714130922658041,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.703270119553219,0.163934945376675,0.504941854408746,0.94652465824877,2.34263246577983,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,1.21443210502468,1.16902343164525,1.18586333383957,1.92792789853084,0.425820255624806,0.35613120733451,1.14020871547503,0.494910368917606,0,1.69946445308487,0.604647113929502,0.943025398779491,0.590603785761546,0.922305443831782,0,0,0.356497378384721,0,0,0,0.340439605753788,1.26042765821917,1.03486947026204,1.28602221018955,0.532020700926821,1.07021290561242,0.987294123612726,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0,0.619160603889667,0.370389054739423,0.188368457004691,0,0,1.5298058699447,1.25956307091292,0.967399816630967,0,1.10717597753397,0,0.216010681643603,0.209088296014469,0.655087691238533,0.809186078308924,0.495920734352016,0.26175594198403,0.259229946583586,0,1.69107881605257,1.19613236835183,0.66183396182839,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,1.17183946359555,0.524296722128554,0,0.864090018773596,0,0.810900861160657,0.410843828659309,0.909445760844565,0.716106782669926,0,0.480781798079875,0.443068581523732,0.403865799792591,0.381034033274999,1.00826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0,0,0,0.214368379079066,1.00314420807073,1.12950368523413,0,2.29158205375759,0.859265911718438,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,1.764384908931,0,0.682934423016537,0.243106717068294,0.419226325255965,1.2869045591501,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0,0.883193520806384,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,0.526139422875686,0.135804113845862,0,0.474540072496697,0.591026894253381,0,0.77468420592983,0.385813221962283,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0,0.231867835620421 | ||
|short_description=p9@Ube2e3 | |||
}} | }} |
Latest revision as of 00:39, 27 September 2015
Short description: | p9@Ube2e3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ube2e3_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENSMUST00000153614_5end |
EntrezGene: | Ube2e3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.80e-14 | 33 |
neuronal stem cell | 4.80e-14 | 33 |
neuroblast | 4.80e-14 | 33 |
electrically signaling cell | 4.80e-14 | 33 |
CNS neuron (sensu Vertebrata) | 4.03e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-12 | 23 |
electrically responsive cell | 4.52e-11 | 39 |
electrically active cell | 4.52e-11 | 39 |
ectodermal cell | 1.68e-10 | 44 |
neurectodermal cell | 1.68e-10 | 44 |
neural cell | 1.45e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.62e-13 | 95 |
ectoderm | 1.62e-13 | 95 |
presumptive ectoderm | 1.62e-13 | 95 |
neurectoderm | 5.93e-12 | 64 |
neural plate | 5.93e-12 | 64 |
presumptive neural plate | 5.93e-12 | 64 |
central nervous system | 1.12e-11 | 73 |
ecto-epithelium | 1.47e-11 | 73 |
nervous system | 3.71e-11 | 75 |
pre-chordal neural plate | 1.49e-09 | 49 |
structure with developmental contribution from neural crest | 2.33e-08 | 92 |
gray matter | 4.87e-08 | 34 |
neural tube | 9.05e-08 | 52 |
neural rod | 9.05e-08 | 52 |
future spinal cord | 9.05e-08 | 52 |
neural keel | 9.05e-08 | 52 |
regional part of nervous system | 2.69e-07 | 54 |
sense organ | 3.80e-07 | 12 |
sensory system | 3.80e-07 | 12 |
entire sense organ system | 3.80e-07 | 12 |