FFCP PHASE1:Mm9::chr13:100214377..100214396,-: Difference between revisions
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|id=chr13:100214377..100214396,-
|short_description=p5@Mtap1b
|description=CAGE_peak_5_at_Mtap1b_5end
|association_with_transcript=25bp_to_uc007rps.1_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17755 | |EntrezGene=17755 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=763 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_uc007rps.1_5end | |||
|cluster_id=chr13:100214377..100214396,- | |||
|description=CAGE_peak_5_at_Mtap1b_5end | |||
|id=chr13:100214377..100214396,- | |||
|ontology_enrichment_celltype=CL:0000540!1.21e-10!33;CL:0000047!1.21e-10!33;CL:0000031!1.21e-10!33;CL:0000404!1.21e-10!33;CL:0000221!1.16e-09!44;CL:0000133!1.16e-09!44;CL:0002319!4.76e-09!43;CL:0000117!6.48e-08!23;CL:0000337!6.48e-08!23;CL:0000393!6.97e-08!39;CL:0000211!6.97e-08!39;CL:0002609!1.56e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.61e-12,6;CL:0000117,1.49e-09,23;CL:0000337,1.49e-09,23;CL:0000540,6.64e-07,33;CL:0000047,6.64e-07,33;CL:0000031,6.64e-07,33;CL:0000404,6.64e-07,33;CL:0002608,7.59e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.08e-14!102;UBERON:0000924!2.08e-14!102;UBERON:0006601!2.08e-14!102;UBERON:0000073!2.95e-13!75;UBERON:0001016!2.95e-13!75;UBERON:0001017!4.55e-13!73;UBERON:0005743!4.55e-13!73;UBERON:0002346!7.17e-13!71;UBERON:0003075!7.17e-13!71;UBERON:0007284!7.17e-13!71;UBERON:0000033!1.00e-12!63;UBERON:0003056!1.76e-12!49;UBERON:0001049!1.94e-09!52;UBERON:0005068!1.94e-09!52;UBERON:0006241!1.94e-09!52;UBERON:0007135!1.94e-09!52;UBERON:0000020!2.02e-08!12;UBERON:0001032!2.02e-08!12;UBERON:0004456!2.02e-08!12;UBERON:0000970!2.14e-08!9;UBERON:0000019!2.14e-08!9;UBERON:0000047!2.14e-08!9;UBERON:0004088!2.14e-08!9;UBERON:0002104!2.14e-08!9;UBERON:0001456!2.14e-08!9;UBERON:0003072!2.14e-08!9;UBERON:0003071!2.14e-08!9;UBERON:0004128!2.14e-08!9;UBERON:0005085!1.60e-07!13;UBERON:0000955!2.91e-07!50;UBERON:0006238!2.91e-07!50;UBERON:0003080!5.16e-07!40;UBERON:0002616!6.34e-07!49;UBERON:0007811!9.39e-07!86;UBERON:0002780!9.56e-07!39;UBERON:0001890!9.56e-07!39;UBERON:0006240!9.56e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.63e-16,49;UBERON:0000970,2.47e-14,9;UBERON:0000019,2.47e-14,9;UBERON:0000047,2.47e-14,9;UBERON:0010312,2.47e-14,9;UBERON:0004088,2.47e-14,9;UBERON:0002104,2.47e-14,9;UBERON:0001456,2.47e-14,9;UBERON:0003072,2.47e-14,9;UBERON:0004128,2.47e-14,9;UBERON:0003071,2.47e-14,9;UBERON:0000020,9.10e-13,12;UBERON:0001032,9.10e-13,12;UBERON:0004456,9.10e-13,12;UBERON:0000033,1.26e-11,13;UBERON:0005085,1.26e-11,13;UBERON:0001444,2.08e-11,11;UBERON:0002346,8.49e-11,64;UBERON:0003075,8.49e-11,64;UBERON:0007284,8.49e-11,64;UBERON:0004121,3.57e-10,95;UBERON:0000924,3.57e-10,95;UBERON:0006601,3.57e-10,95;UBERON:0010371,1.07e-09,73;UBERON:0002780,1.34e-07,39;UBERON:0001890,1.34e-07,39;UBERON:0006240,1.34e-07,39;UBERON:0003080,2.54e-07,40 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,19.1825782770684,10.5304631898719,13.4607975264884,0.285650984403804,0,10.656699531701,9.10531974673246,5.51531271966013,0,0,0,1.31886287730194,2.19570344645783,1.04182674111352,0,0,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0.982430281388212,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,2.76439574648302,0,0.255715457330331,0,0.162241263067758,0,0,0,0,16.6554166992261,16.7828536236435,30.430499937104,27.1268672104287,37.8282935281383,42.9180962954247,23.2380276908127,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36680608472354,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.94652465824877,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0,1.46127928955656,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56256594931503,3.62204314591713,2.7863814554107,1.06404140185364,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,25.84304954846,14.7639203158381,5.46347538413229,1.70174701947806,3.5634237646757,1.83843508450014,0.888986911206461,0.824140228955577,0.320919209591815,1.26348605881899,2.02783439912192,1.50901073108861,1.03005658216871,1.02440243847791,0.746661096422973,0.476293691283074,0.927074607558844,0.38581844092741,1.64834360321323,1.03039244094078,1.71434626192708,1.59728225543404,0.715308569841963,1.16277133305863,1.50575008664529,1.18460451048347,0.73171189149109,1.31534855718921,0.679020569229309,1.12228454331548,0.830445126869219,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,3.49734809113124,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,19.1825782770684,10.5304631898719,13.4607975264884,0.285650984403804,0,10.656699531701,9.10531974673246,5.51531271966013,0,0,0,1.31886287730194,2.19570344645783,1.04182674111352,0,0,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0.982430281388212,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,2.76439574648302,0,0.255715457330331,0,0.162241263067758,0,0,0,0,16.6554166992261,16.7828536236435,30.430499937104,27.1268672104287,37.8282935281383,42.9180962954247,23.2380276908127,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36680608472354,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.94652465824877,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0,1.46127928955656,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56256594931503,3.62204314591713,2.7863814554107,1.06404140185364,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,25.84304954846,14.7639203158381,5.46347538413229,1.70174701947806,3.5634237646757,1.83843508450014,0.888986911206461,0.824140228955577,0.320919209591815,1.26348605881899,2.02783439912192,1.50901073108861,1.03005658216871,1.02440243847791,0.746661096422973,0.476293691283074,0.927074607558844,0.38581844092741,1.64834360321323,1.03039244094078,1.71434626192708,1.59728225543404,0.715308569841963,1.16277133305863,1.50575008664529,1.18460451048347,0.73171189149109,1.31534855718921,0.679020569229309,1.12228454331548,0.830445126869219,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,3.49734809113124,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Mtap1b | |||
}} | }} |
Latest revision as of 00:54, 27 September 2015
Short description: | p5@Mtap1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mtap1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:763 |
Association with transcript: | 25bp_to_uc007rps.1_5end |
EntrezGene: | Mtap1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.61e-12 | 6 |
CNS neuron (sensu Vertebrata) | 1.49e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.49e-09 | 23 |
neuron | 6.64e-07 | 33 |
neuronal stem cell | 6.64e-07 | 33 |
neuroblast | 6.64e-07 | 33 |
electrically signaling cell | 6.64e-07 | 33 |
hippocampal neuron | 7.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.63e-16 | 49 |
eye | 2.47e-14 | 9 |
camera-type eye | 2.47e-14 | 9 |
simple eye | 2.47e-14 | 9 |
immature eye | 2.47e-14 | 9 |
ocular region | 2.47e-14 | 9 |
visual system | 2.47e-14 | 9 |
face | 2.47e-14 | 9 |
optic cup | 2.47e-14 | 9 |
optic vesicle | 2.47e-14 | 9 |
eye primordium | 2.47e-14 | 9 |
sense organ | 9.10e-13 | 12 |
sensory system | 9.10e-13 | 12 |
entire sense organ system | 9.10e-13 | 12 |
head | 1.26e-11 | 13 |
ectodermal placode | 1.26e-11 | 13 |
subdivision of head | 2.08e-11 | 11 |
neurectoderm | 8.49e-11 | 64 |
neural plate | 8.49e-11 | 64 |
presumptive neural plate | 8.49e-11 | 64 |
ectoderm-derived structure | 3.57e-10 | 95 |
ectoderm | 3.57e-10 | 95 |
presumptive ectoderm | 3.57e-10 | 95 |
ecto-epithelium | 1.07e-09 | 73 |
regional part of forebrain | 1.34e-07 | 39 |
forebrain | 1.34e-07 | 39 |
future forebrain | 1.34e-07 | 39 |
anterior neural tube | 2.54e-07 | 40 |