FFCP PHASE1:Mm9::chr11:117643595..117643651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217356 | |EntrezGene=217356 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TN58,B0QZP6,B0QZP7,B1ATC0 | |UniProt=Q7TN58,B0QZP6,B0QZP7,B1ATC0 | ||
|association_with_transcript=0bp_to_ENSMUST00000050874,ENSMUST00000106334,NM_001195089,NM_001195090,NM_181856,uc007mns.2,uc007mnt.2,uc011yii.1_5end | |association_with_transcript=0bp_to_ENSMUST00000050874,ENSMUST00000106334,NM_001195089,NM_001195090,NM_181856,uc007mns.2,uc007mnt.2,uc011yii.1_5end | ||
|cluster_id=chr11:117643595..117643651,+ | |||
|description=CAGE_peak_1_at_Tmc8_5end | |description=CAGE_peak_1_at_Tmc8_5end | ||
|id=chr11:117643595..117643651,+ | |id=chr11:117643595..117643651,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.03e-09!25;CL:0000838!1.18e-07!12;CL:0000084!4.65e-07!11;CL:0000827!4.65e-07!11;CL:0000542!9.26e-07!13;CL:0000051!9.26e-07!13 | |ontology_enrichment_celltype=CL:0002031!1.03e-09!25;CL:0000838!1.18e-07!12;CL:0000084!4.65e-07!11;CL:0000827!4.65e-07!11;CL:0000542!9.26e-07!13;CL:0000051!9.26e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.38e-10,25;CL:0000838,6.59e-08,12;CL:0000084,2.75e-07,11;CL:0000827,2.75e-07,11;CL:0000542,9.86e-07,13;CL:0000051,9.86e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.85e-15!70;UBERON:0005057!7.23e-14!51;UBERON:0002193!1.23e-11!48;UBERON:0004177!3.24e-11!29;UBERON:0000926!9.02e-11!193;UBERON:0004120!9.02e-11!193;UBERON:0006603!9.02e-11!193;UBERON:0002390!1.03e-10!45;UBERON:0003061!1.03e-10!45;UBERON:0002368!1.70e-09!60;UBERON:0001041!2.04e-09!92;UBERON:0003081!6.37e-09!88;UBERON:0002530!9.32e-09!65;UBERON:0000077!1.19e-08!97;UBERON:0003408!1.54e-08!24;UBERON:0002370!2.11e-08!23;UBERON:0000974!2.11e-08!23;UBERON:0004807!2.11e-08!23;UBERON:0005058!2.11e-08!23;UBERON:0003351!2.11e-08!23;UBERON:0009113!2.11e-08!23;UBERON:0003295!2.11e-08!23;UBERON:0009722!2.11e-08!23;UBERON:0005562!2.11e-08!23;UBERON:0007690!2.11e-08!23;UBERON:0001004!3.32e-08!42;UBERON:0000065!4.91e-08!41;UBERON:0006562!6.29e-08!24;UBERON:0001557!6.29e-08!24;UBERON:0001042!6.29e-08!24;UBERON:0008814!6.29e-08!24;UBERON:0009145!6.29e-08!24;UBERON:0003104!8.69e-08!131;UBERON:0009142!8.69e-08!131;UBERON:0001048!1.35e-07!147;UBERON:0005911!1.52e-07!69;UBERON:0000949!1.77e-07!72 | |ontology_enrichment_uberon=UBERON:0002405!4.85e-15!70;UBERON:0005057!7.23e-14!51;UBERON:0002193!1.23e-11!48;UBERON:0004177!3.24e-11!29;UBERON:0000926!9.02e-11!193;UBERON:0004120!9.02e-11!193;UBERON:0006603!9.02e-11!193;UBERON:0002390!1.03e-10!45;UBERON:0003061!1.03e-10!45;UBERON:0002368!1.70e-09!60;UBERON:0001041!2.04e-09!92;UBERON:0003081!6.37e-09!88;UBERON:0002530!9.32e-09!65;UBERON:0000077!1.19e-08!97;UBERON:0003408!1.54e-08!24;UBERON:0002370!2.11e-08!23;UBERON:0000974!2.11e-08!23;UBERON:0004807!2.11e-08!23;UBERON:0005058!2.11e-08!23;UBERON:0003351!2.11e-08!23;UBERON:0009113!2.11e-08!23;UBERON:0003295!2.11e-08!23;UBERON:0009722!2.11e-08!23;UBERON:0005562!2.11e-08!23;UBERON:0007690!2.11e-08!23;UBERON:0001004!3.32e-08!42;UBERON:0000065!4.91e-08!41;UBERON:0006562!6.29e-08!24;UBERON:0001557!6.29e-08!24;UBERON:0001042!6.29e-08!24;UBERON:0008814!6.29e-08!24;UBERON:0009145!6.29e-08!24;UBERON:0003104!8.69e-08!131;UBERON:0009142!8.69e-08!131;UBERON:0001048!1.35e-07!147;UBERON:0005911!1.52e-07!69;UBERON:0000949!1.77e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.83e-12,29;UBERON:0005057,3.83e-12,29;UBERON:0001041,6.19e-12,80;UBERON:0002193,8.03e-12,48;UBERON:0002405,8.03e-12,48;UBERON:0002390,7.27e-11,45;UBERON:0003061,7.27e-11,45;UBERON:0000077,6.96e-10,35;UBERON:0002368,9.67e-10,60;UBERON:0003408,2.54e-09,24;UBERON:0002370,3.48e-09,23;UBERON:0000974,3.48e-09,23;UBERON:0004807,3.48e-09,23;UBERON:0005058,3.48e-09,23;UBERON:0003351,3.48e-09,23;UBERON:0009113,3.48e-09,23;UBERON:0003295,3.48e-09,23;UBERON:0009722,3.48e-09,23;UBERON:0005562,3.48e-09,23;UBERON:0007690,3.48e-09,23;UBERON:0001004,5.25e-09,42;UBERON:0002530,5.35e-09,65;UBERON:0000065,7.90e-09,41;UBERON:0005911,9.58e-09,69;UBERON:0006562,1.15e-08,24;UBERON:0001557,1.15e-08,24;UBERON:0001042,1.15e-08,24;UBERON:0008814,1.15e-08,24;UBERON:0009145,1.15e-08,24;UBERON:0003081,1.78e-08,87;UBERON:0001048,2.72e-08,134;UBERON:0000949,7.61e-08,72;UBERON:0000926,9.47e-08,120;UBERON:0004120,9.47e-08,120;UBERON:0006603,9.47e-08,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,76.3118841539716,12.67098499365,17.5548394741495,30.4767983441399,16.9914698660067,69.5074963520695,79.0280437867737,18.9872564234928,27.1316858302367,21.6864182219725,41.7987369099665,35.7868671710978,32.2536135366503,2.97651515528744,12.7092417537133,10.1867917764185,5.27974995218242,4.12936705920906,0,0,0,0.760093677825496,1.26015064879965,0.665191531965914,26.6712882853045,27.0628506537211,31.6963362030877,0,0.166234645358492,0,67.802124179379,39.06676722619,51.3053269094322,58.2349173150704,66.2554120409692,72.826552954673,0,0.101376931219515,0,0,0,0,0,0,0,46.475781877993,55.1275227928622,46.7170380808025,0,0.85960031981627,0,0,0,0,0,0,3.1496490104849,0.988866362566974,4.2628806896766,1.19840044207362,1.53687322128622,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.479227355091182,0.919218786610021,0,0.127687338085188,0,0.527545150920775,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0,0.559198337475902,0.302904773332736,0.529000920747499,20.8702431865208,14.6272059086836,0,0,0.649776417447669,0.448026887097336,6.46044332606059,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,4.22480354960522,41.1711234999003,3.85949561568544,4.51061849591953,3.04465478312141,4.61230994512117,3.91878865436819,3.41007250693544,3.51866455723091,1.23597483867187,3.7595832799177,24.7690954545965,5.01477234836968,16.7839554029899,15.0311328471919,7.45567044872489,0,0,2.55457055208591,1.07833612055328,1.19980546198682,1.65191295194984,0,0,0.125654352112864,0,0.511430914660661,0.20778804455956,0,1.42575109390443,14.0579876789405,0,0.420883711772948,1.56144531555244,0.459804208866946,0.540186389416048,1.9591626318643,0.544291993210623,1.0249097622788,0.468508622798644,1.03481348295606,0.215567992932842,0.945530400839096,1.75951124163949,0.876782929710299,0.834141747676794,2.43776516565517,2.05782136407943,3.58261680273288,0.702213187313235,1.02939162845886,1.13665399758237,6.00664740352955,5.15957331958412,2.16074473753218,3.31442629819294,4.52557733019029,4.16521204795921,4.41814495025775,2.14618721119695,3.03589890154641,2.79751744852917,2.62667942526552,4.45878452502207,5.55559952216263,5.92785311285837,4.96563749413376,0.210289948564127,0.205809224758569,2.31293148088659,0.793351699990633,0.639864751605702,1.85789337488351,1.80414445850931,2.62188582010345,2.00140239460383,2.09248188723815,0,0.823494773620054,1.75934646160189,0.994782360205754,1.75467678407208,2.69645822596266,0.864552199498777,0.796565093017469,0.948339504765408,2.62771579002376,2.25415471346161,0.814605311381257,2.90928730751439,2.03393877681924,1.96033265085198,0.738050739898011,1.09899109488962,1.72756029490521,3.26097889795864,21.5230186373761,19.0662225259807,24.9596944747188,21.9088931099583,23.8765388154893,19.0969388836065,14.0971107350897,7.62035565842666,9.88421087477093,8.62609239164127,10.0478055870496,7.48890415474945,7.32478746046624,3.94674309748207,1.4473305640901,8.86815312799702,1.51593129416388,2.11854469374634,1.86719594352707,4.45911471748154,6.365237782789,6.42717830392237,5.85400943573396,7.56648691709717,7.30833475840957,5.58091690301205,10.1595255123758,7.59813920209941,4.91806799177139,1.50791283939272,0.54390568381871,4.42587845717133,1.93155722413313,0,0.234423373184406,0,2.27223834483936,6.62567260774139,7.41833614163613,6.24727853425117,14.0991590792006,12.6995244226965,8.49229592366497,9.31064613852257,14.6127928955656,14.6256477840214,0.642642632843614,2.55492153374884,2.84904965867608,1.79175655288934,3.29940245945071,1.32745138339963,1.21390318077491,1.81394134178851,1.13163047853539,1.77181135728464,1.53717573971964,2.32585463851399,2.90826983582004,1.78248689192361,4.42451461110142,0,0,0,0.900305470156551,0.646793418913773,2.14337035031592,1.77340233642274,1.24858172321449,2.79733335023606,0.608929898229199,3.28540391289194,2.33015277950202,0.441056796109924,0.49465875882444,1.29171541356724,1.14594557363496,0.716234064018819,0.984845398470368,2.04036585640896,0.370850604021019,38.275077298719,7.22354037871279,16.4823129359043,29.3854792927318,38.137689534166,39.1210676183154,1.86976272993241,3.77868921273877,3.86959926652387,0,2.05618395827738,1.21991680276109,1.40406943068342,0.627264888043406,1.31017538247707,0.944050424693745,1.73572257023205,1.30877970992015,1.29614973291793,4.34937519160848,0,2.8408143748356,1.65458490457098,2.52786544847262,2.32487682259916,2.19642963138012,1.5256441023948,2.3436789271911,0.734015410979976,0,0.288030006257865,48.6657125767395,7.09538253515575,13.2497134742627,20.6574108534694,27.7491378284596,38.1468201180029,39.0635210939899,38.5469665925647,47.5551979255775,41.4565028203199,54.8494447144412,51.945050434288,61.4793668081705,72.8143100591175,1.13365191807606,0,0,0,0.772758376128762,2.62755465631655,1.83151624267265,0.428736758158132,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0.415149390336707,3.19219898720825,3.07320490357441,3.64660075602441,5.44994222832754,1.83843508450014,3.11145418922261,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| ||
|short_description=p1@Tmc8 | |short_description=p1@Tmc8 | ||
}} | }} |
Latest revision as of 01:12, 27 September 2015
Short description: | p1@Tmc8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmc8_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000050874, ENSMUST00000106334, NM_001195089, NM_001195090, NM_181856, uc007mns.2, uc007mnt.2, uc011yii.1_5end |
EntrezGene: | Tmc8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 7.38e-10 | 25 |
lymphoid lineage restricted progenitor cell | 6.59e-08 | 12 |
T cell | 2.75e-07 | 11 |
pro-T cell | 2.75e-07 | 11 |
lymphocyte | 9.86e-07 | 13 |
common lymphoid progenitor | 9.86e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.83e-12 | 29 |
immune organ | 3.83e-12 | 29 |
foregut | 6.19e-12 | 80 |
hemolymphoid system | 8.03e-12 | 48 |
immune system | 8.03e-12 | 48 |
hematopoietic system | 7.27e-11 | 45 |
blood island | 7.27e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 6.96e-10 | 35 |
endocrine gland | 9.67e-10 | 60 |
gland of gut | 2.54e-09 | 24 |
thymus | 3.48e-09 | 23 |
neck | 3.48e-09 | 23 |
respiratory system epithelium | 3.48e-09 | 23 |
hemolymphoid system gland | 3.48e-09 | 23 |
pharyngeal epithelium | 3.48e-09 | 23 |
thymic region | 3.48e-09 | 23 |
pharyngeal gland | 3.48e-09 | 23 |
entire pharyngeal arch endoderm | 3.48e-09 | 23 |
thymus primordium | 3.48e-09 | 23 |
early pharyngeal endoderm | 3.48e-09 | 23 |
respiratory system | 5.25e-09 | 42 |
gland | 5.35e-09 | 65 |
respiratory tract | 7.90e-09 | 41 |
endo-epithelium | 9.58e-09 | 69 |
pharynx | 1.15e-08 | 24 |
upper respiratory tract | 1.15e-08 | 24 |
chordate pharynx | 1.15e-08 | 24 |
pharyngeal arch system | 1.15e-08 | 24 |
pharyngeal region of foregut | 1.15e-08 | 24 |
lateral plate mesoderm | 1.78e-08 | 87 |
primordium | 2.72e-08 | 134 |
endocrine system | 7.61e-08 | 72 |
mesoderm | 9.47e-08 | 120 |
mesoderm-derived structure | 9.47e-08 | 120 |
presumptive mesoderm | 9.47e-08 | 120 |