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FFCP PHASE1:Mm9::chr1:33776708..33776746,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19335
|EntrezGene=19335
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9D4I9,Q0PD32
|UniProt=Q9D4I9,Q0PD32
|association_with_transcript=0bp_to_ENSMUST00000088287,ENSMUST00000140354,NM_008999,uc007anu.1,uc007anv.1,uc007anw.2,uc007anx.2_5end
|association_with_transcript=0bp_to_ENSMUST00000088287,ENSMUST00000140354,NM_008999,uc007anu.1,uc007anv.1,uc007anw.2,uc007anx.2_5end
|cluster_id=chr1:33776708..33776746,+
|description=CAGE_peak_2_at_Rab23_5end
|description=CAGE_peak_2_at_Rab23_5end
|id=chr1:33776708..33776746,+
|id=chr1:33776708..33776746,+
|ontology_enrichment_celltype=CL:0000117!2.41e-08!23;CL:0000337!2.41e-08!23;CL:0000221!4.04e-08!44;CL:0000133!4.04e-08!44;CL:0000055!8.06e-08!50;CL:0002319!8.23e-08!43;CL:0000393!1.10e-07!39;CL:0000211!1.10e-07!39;CL:0000540!3.84e-07!33;CL:0000047!3.84e-07!33;CL:0000031!3.84e-07!33;CL:0000404!3.84e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-08,23;CL:0000337,2.29e-08,23;CL:0000221,3.84e-08,44;CL:0000133,3.84e-08,44;CL:0002319,7.83e-08,43;CL:0000393,1.05e-07,39;CL:0000211,1.05e-07,39;CL:0000540,3.67e-07,33;CL:0000047,3.67e-07,33;CL:0000031,3.67e-07,33;CL:0000404,3.67e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.30e-14!75;UBERON:0001016!2.30e-14!75;UBERON:0001017!4.39e-14!73;UBERON:0005743!4.39e-14!73;UBERON:0001049!3.80e-13!52;UBERON:0005068!3.80e-13!52;UBERON:0006241!3.80e-13!52;UBERON:0007135!3.80e-13!52;UBERON:0004121!3.24e-12!102;UBERON:0000924!3.24e-12!102;UBERON:0006601!3.24e-12!102;UBERON:0000033!5.32e-12!63;UBERON:0002616!3.21e-11!49;UBERON:0000955!3.41e-11!50;UBERON:0006238!3.41e-11!50;UBERON:0002346!5.49e-11!71;UBERON:0003075!5.49e-11!71;UBERON:0007284!5.49e-11!71;UBERON:0003056!1.12e-10!49;UBERON:0003080!4.41e-10!40;UBERON:0002780!4.80e-10!39;UBERON:0001890!4.80e-10!39;UBERON:0006240!4.80e-10!39;UBERON:0002020!8.65e-09!34;UBERON:0002791!2.31e-07!29;UBERON:0003528!2.31e-07!29;UBERON:0001893!2.31e-07!29;UBERON:0000153!3.49e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.09e-14,75;UBERON:0004121,2.29e-14,95;UBERON:0000924,2.29e-14,95;UBERON:0006601,2.29e-14,95;UBERON:0001017,3.98e-14,73;UBERON:0002346,1.02e-13,64;UBERON:0003075,1.02e-13,64;UBERON:0007284,1.02e-13,64;UBERON:0010371,3.24e-13,73;UBERON:0001049,3.47e-13,52;UBERON:0005068,3.47e-13,52;UBERON:0006241,3.47e-13,52;UBERON:0007135,3.47e-13,52;UBERON:0000073,8.51e-13,54;UBERON:0002616,3.76e-11,46;UBERON:0000955,4.07e-11,47;UBERON:0006238,4.07e-11,47;UBERON:0003056,1.05e-10,49;UBERON:0003080,4.13e-10,40;UBERON:0002780,4.49e-10,39;UBERON:0001890,4.49e-10,39;UBERON:0006240,4.49e-10,39;UBERON:0010314,2.58e-09,92;UBERON:0002020,8.17e-09,34;UBERON:0003528,2.21e-07,29;UBERON:0002791,2.21e-07,29;UBERON:0001893,2.21e-07,29
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|phase1_expression=4.48416771893423,0.348975407639361,0,0.90739263392049,0,0.16787927191189,1.40167584357315,0.387369970324729,0.703943610758334,1.87251621057595,1.71217968225505,1.7549874978974,1.19840510951844,1.04904482902797,0.666219523631325,1.41732687172878,2.09868563438444,1.26184866143295,0.959801035240171,0.42438965179803,2.8064285749853,0.695036658406197,0.522399578277871,0.47997726838022,0.45881856213434,0,0.86152399231815,0.646413698057667,0,0,0.443461021310609,2.54012269383853,1.23012957516914,0,0.866554859253824,0.332469290716985,1.22501613757421,8.78916424547506,3.1253413780952,6.80580867165938,9.41170380849623,8.87959130445979,3.88408282424923,6.6725313527056,5.67710814829281,6.05704282133549,1.56478268869608,4.14247797122848,5.71184075109627,4.47188767870852,4.19959264876088,5.75010257459886,0.503347818173209,0,0,2.05807548828758,2.29226751951005,3.09403255366465,6.47412674750713,4.23192783417626,7.60597684207415,2.37191172448392,2.66788438833342,0.449949858640699,0,0.7104801149461,2.39680088414724,3.07374644257244,7.98410014775278,6.88530285491622,5.46844899513593,3.42781181284564,6.40518768759679,4.89963196859816,5.75072826109418,2.75765635983006,2.20231761998777,4.85211884723713,4.14737639791857,5.93488294785872,6.67859798297591,6.25096044668112,5.30447698102624,6.19038871034848,3.66715794664344,5.59794312399969,4.9830088279686,4.65998614563251,3.3319525066601,4.6854367266207,2.31891590961342,0.860423876981386,0.679971333707751,0.539703191637817,2.59910566979068,0.896053774194671,1.68533304158102,6.64678258054425,5.97507810586598,5.65343319216544,4.92951969218382,6.41632387071589,2.54805239706646,7.11066703153331,1.29894624606728,2.53359865475099,2.02209778005913,1.02765491747154,1.03575153458869,1.63286352971307,2.94925055502431,0.913396434936424,1.61430848079241,2.26083960828934,2.58695155698551,1.50799909595611,3.21353458054686,1.73519228303894,2.65383165584962,6.63244084784378,2.42925670306433,2.42437626567611,1.86391761218122,7.02673912827713,5.86450779077674,1.78819938646014,0.239630249011841,0.599902730993408,0.381210681219194,3.74476598512057,2.74500361691176,8.29318723944905,3.99795936442236,8.69432554923124,4.77912502486988,5.19172041816825,3.66621709861139,1.11966273549084,1.0108910337347,1.26265113531884,3.90361328888111,4.59804208866946,5.58192602396583,3.31550599238573,4.62648194229029,4.61209393025459,4.8724896771059,2.32833033665114,5.38919982332106,5.67318240503458,4.04687585577082,4.82230611340665,5.56094498451196,5.92028683087683,5.14455341019859,3.58261680273288,0,0.257347907114715,0,2.89976081549703,3.28336483973535,1.62055855314913,2.13070262026689,2.75469924446365,2.31400669331067,2.55787339225449,2.95100741539581,1.75148013550754,3.62031669809657,4.26835406605648,2.59420190546738,3.21639972335731,3.95190207523891,1.61047702512446,4.20579897128254,5.9684675179985,0.330418782983798,1.58670339998127,5.11891801284562,3.0190767341857,4.38149368495117,2.01683524623343,2.44615848229357,1.90225626112559,1.42358718463353,1.64698954724011,2.5133520880027,0.994782360205754,2.53453313254856,0,1.51296634912286,1.39398891278057,4.55202962287396,4.68418901699888,3.38123207019241,5.29493452397817,3.68509725618489,3.08597607517402,2.71917109634306,2.21415221969403,2.511979645462,0.987177311374404,0.889357881261447,2.16898637430922,2.16214894624523,1.57403478669398,2.02860121388503,1.20588579876208,1.01850340712568,1.43848068725405,0.162135226775035,1.64736847912849,1.43768206527355,0.372140947668503,2.18426371180192,1.51547326768267,1.97337154874103,0.964887042726734,3.69506380333209,4.35830247072115,4.56301934037672,4.2436271443797,3.05097322775053,3.68513766371995,3.33261097240419,4.09780660501378,3.62560831444239,2.6575762757853,3.50800491046472,2.45794972073607,2.24490476425664,2.4590339958857,6.03165135757089,1.08781136763742,0.983528546038072,1.93155722413313,4.0137647496948,4.92289083687253,8.85248705034047,1.76729649043061,2.2085575359138,5.0757036758563,3.01592756825919,2.38968797952552,2.67358408898873,2.26461224631066,2.42886421004937,3.79932615284705,4.34816555741176,3.53453448063988,3.69044221541498,5.34196811001766,4.0721739838394,4.94910368917606,1.32745138339963,4.12727081463468,1.209294227859,3.58349651536206,1.18120757152309,2.15204603560749,1.80899805217755,3.99887102425256,1.78248689192361,4.10847785316561,2.10837217149998,2.06271086496374,6.80879211507576,4.86164953884538,4.2688365648309,3.21505552547388,6.56158864476412,5.35106452806212,4.60737257685939,3.65357938937519,2.81606049676452,2.1183207086382,0.661585194164886,3.79238381765404,2.26050197374268,4.16159182004275,3.46179797609096,3.93938159388147,1.1659233465194,5.93360966433631,0.854354403989263,3.714963623338,2.22233432843654,1.50694765603753,1.91371918809435,1.60144721244566,0.169978429993855,0.139951452323658,0.414599921413271,3.81868247206045,5.852215881251,3.45643094115643,4.53622431451565,4.80903080833278,2.18362563746178,5.93403124093211,5.78574190077352,3.92633912976044,1.94422459937689,1.24267862617385,2.81846469342095,4.03694674318743,4.46737924234164,5.44463327363333,4.52059382172059,4.22390313726945,3.75543163666413,5.85919731797776,5.7672639434141,4.1069300540421,3.74439008135225,0,4.05450430580328,3.18403967210964,1.81889152168913,1.61124026100733,2.38417625737518,1.56254084375959,1.18151621739662,1.41353029927407,1.37172251979,0.907435666231565,1.26695244961678,0.769694733122636,0.935015217452552,3.85441652145859,5.10567692760349,7.44625009858648,5.37230772365051,3.86379188064381,3.56596703357246,3.11357761254351,2.78678892802786,2.00628841614145,3.3885110557024,5.9842280745933,6.87474616127276,4.46818274093588,2.05524755931193,3.0215755895588,4.05013500139084,1.80128481289688,4.07828168085784,3.62432218226274,5.39694207437719,0.798049746802062,3.75613932659095,2.18796045361465,4.40187641518763,4.77993121970037,2.889207461421,2.67845574410562,4.49286893428541,4.54854981174835,3.8021894983536,4.33840585187975,3.27745276144588,3.58540853467268,4.02048282689293,1.42888107384922,3.24476112645595,2.50781986602817,3.29668720642645,3.67997300335993,3.42869252385415,5.14679837862079,4.76872379894642,2.90692833264657,3.48204707536723,3.21535509988371,3.65855945745545,4.20911538300549,2.71608227691724,1.68342681497322,4.50813068871862,5.51625101303155,3.27384834535751,3.56354734727722,2.50778594275484,3.49734809113124,3.27504251823572,3.00819475667618,4.59091996965224,2.8676884485537,3.2461496986859
|short_description=p2@Rab23
|short_description=p2@Rab23
}}
}}

Latest revision as of 01:41, 27 September 2015

Short description:p2@Rab23
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab23_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000088287, ENSMUST00000140354, NM_008999, uc007anu.1, uc007anv.1, uc007anw.2, uc007anx.2_5end
EntrezGene:Rab23
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab23

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F18.29
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D52.72
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H34.16
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A95.79
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I45.86
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I85.40
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.29e-0823
neuroblast (sensu Vertebrata)2.29e-0823
ectodermal cell3.84e-0844
neurectodermal cell3.84e-0844
neural cell7.83e-0843
electrically responsive cell1.05e-0739
electrically active cell1.05e-0739
neuron3.67e-0733
neuronal stem cell3.67e-0733
neuroblast3.67e-0733
electrically signaling cell3.67e-0733

Uber anatomy
Ontology termp-valuen
nervous system2.09e-1475
ectoderm-derived structure2.29e-1495
ectoderm2.29e-1495
presumptive ectoderm2.29e-1495
central nervous system3.98e-1473
neurectoderm1.02e-1364
neural plate1.02e-1364
presumptive neural plate1.02e-1364
ecto-epithelium3.24e-1373
neural tube3.47e-1352
neural rod3.47e-1352
future spinal cord3.47e-1352
neural keel3.47e-1352
regional part of nervous system8.51e-1354
regional part of brain3.76e-1146
brain4.07e-1147
future brain4.07e-1147
pre-chordal neural plate1.05e-1049
anterior neural tube4.13e-1040
regional part of forebrain4.49e-1039
forebrain4.49e-1039
future forebrain4.49e-1039
structure with developmental contribution from neural crest2.58e-0992
gray matter8.17e-0934
brain grey matter2.21e-0729
regional part of telencephalon2.21e-0729
telencephalon2.21e-0729
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