FFCP PHASE1:Mm9::chr11:118216683..118216691,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21858 | |EntrezGene=21858 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=866 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PI17,Q8BSJ3 | |UniProt=Q6PI17,Q8BSJ3 | ||
|association_with_transcript=33bp_to_NM_011594,uc007mow.1_5end | |association_with_transcript=33bp_to_NM_011594,uc007mow.1_5end | ||
|cluster_id=chr11:118216683..118216691,- | |||
|description=CAGE_peak_2_at_Timp2_5end | |description=CAGE_peak_2_at_Timp2_5end | ||
|id=chr11:118216683..118216691,- | |id=chr11:118216683..118216691,- | ||
|ontology_enrichment_celltype=CL:0000055!4.38e-15!50;CL:0000221!6.69e-13!44;CL:0000133!6.69e-13!44;CL:0002319!9.95e-13!43;CL:0000393!2.57e-10!39;CL:0000211!2.57e-10!39;CL:0000540!6.91e-08!33;CL:0000047!6.91e-08!33;CL:0000031!6.91e-08!33;CL:0000404!6.91e-08!33 | |ontology_enrichment_celltype=CL:0000055!4.38e-15!50;CL:0000221!6.69e-13!44;CL:0000133!6.69e-13!44;CL:0002319!9.95e-13!43;CL:0000393!2.57e-10!39;CL:0000211!2.57e-10!39;CL:0000540!6.91e-08!33;CL:0000047!6.91e-08!33;CL:0000031!6.91e-08!33;CL:0000404!6.91e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.65e-13,44;CL:0000133,3.65e-13,44;CL:0002319,5.48e-13,43;CL:0000393,1.61e-10,39;CL:0000211,1.61e-10,39;CL:0000540,4.93e-08,33;CL:0000047,4.93e-08,33;CL:0000031,4.93e-08,33;CL:0000404,4.93e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.91e-26!75;UBERON:0001016!3.91e-26!75;UBERON:0001017!2.38e-25!73;UBERON:0005743!2.38e-25!73;UBERON:0004121!2.03e-18!102;UBERON:0000924!2.03e-18!102;UBERON:0006601!2.03e-18!102;UBERON:0001049!8.13e-18!52;UBERON:0005068!8.13e-18!52;UBERON:0006241!8.13e-18!52;UBERON:0007135!8.13e-18!52;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0002616!5.54e-17!49;UBERON:0000033!3.00e-14!63;UBERON:0002346!2.80e-13!71;UBERON:0003075!2.80e-13!71;UBERON:0007284!2.80e-13!71;UBERON:0002020!5.90e-13!34;UBERON:0003080!1.62e-12!40;UBERON:0002780!7.17e-12!39;UBERON:0001890!7.17e-12!39;UBERON:0006240!7.17e-12!39;UBERON:0002791!2.95e-11!29;UBERON:0003528!2.95e-11!29;UBERON:0001893!2.95e-11!29;UBERON:0000025!3.63e-11!114;UBERON:0004111!5.71e-11!122;UBERON:0003056!9.56e-10!49;UBERON:0002619!3.49e-08!17;UBERON:0000956!1.04e-07!21;UBERON:0001869!1.04e-07!21;UBERON:0000203!1.04e-07!21;UBERON:0002021!7.27e-07!10;UBERON:0000411!7.27e-07!10;UBERON:0001950!7.27e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!3.91e-26!75;UBERON:0001016!3.91e-26!75;UBERON:0001017!2.38e-25!73;UBERON:0005743!2.38e-25!73;UBERON:0004121!2.03e-18!102;UBERON:0000924!2.03e-18!102;UBERON:0006601!2.03e-18!102;UBERON:0001049!8.13e-18!52;UBERON:0005068!8.13e-18!52;UBERON:0006241!8.13e-18!52;UBERON:0007135!8.13e-18!52;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0002616!5.54e-17!49;UBERON:0000033!3.00e-14!63;UBERON:0002346!2.80e-13!71;UBERON:0003075!2.80e-13!71;UBERON:0007284!2.80e-13!71;UBERON:0002020!5.90e-13!34;UBERON:0003080!1.62e-12!40;UBERON:0002780!7.17e-12!39;UBERON:0001890!7.17e-12!39;UBERON:0006240!7.17e-12!39;UBERON:0002791!2.95e-11!29;UBERON:0003528!2.95e-11!29;UBERON:0001893!2.95e-11!29;UBERON:0000025!3.63e-11!114;UBERON:0004111!5.71e-11!122;UBERON:0003056!9.56e-10!49;UBERON:0002619!3.49e-08!17;UBERON:0000956!1.04e-07!21;UBERON:0001869!1.04e-07!21;UBERON:0000203!1.04e-07!21;UBERON:0002021!7.27e-07!10;UBERON:0000411!7.27e-07!10;UBERON:0001950!7.27e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-26,75;UBERON:0001017,6.65e-26,73;UBERON:0004121,6.15e-20,95;UBERON:0000924,6.15e-20,95;UBERON:0006601,6.15e-20,95;UBERON:0000073,2.95e-19,54;UBERON:0001049,3.41e-18,52;UBERON:0005068,3.41e-18,52;UBERON:0006241,3.41e-18,52;UBERON:0007135,3.41e-18,52;UBERON:0010314,3.20e-16,92;UBERON:0000955,3.45e-16,47;UBERON:0006238,3.45e-16,47;UBERON:0002616,1.30e-15,46;UBERON:0002346,2.56e-15,64;UBERON:0003075,2.56e-15,64;UBERON:0007284,2.56e-15,64;UBERON:0010371,1.81e-13,73;UBERON:0002020,3.21e-13,34;UBERON:0003080,9.01e-13,40;UBERON:0002780,4.14e-12,39;UBERON:0001890,4.14e-12,39;UBERON:0006240,4.14e-12,39;UBERON:0000025,1.45e-11,114;UBERON:0003528,1.76e-11,29;UBERON:0002791,1.76e-11,29;UBERON:0001893,1.76e-11,29;UBERON:0004111,3.28e-11,122;UBERON:0003056,7.52e-10,49;UBERON:0002619,2.45e-08,17;UBERON:0000956,7.45e-08,21;UBERON:0001869,7.45e-08,21;UBERON:0000203,7.45e-08,21;UBERON:0002021,5.47e-07,10;UBERON:0000411,5.47e-07,10;UBERON:0001950,5.47e-07,10 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0.516493293766305,0,0.70219357896598,0.171217968225505,0,0.342401459862411,0.874204024189974,0.333109761815663,0,0,0.473193248037357,0.274228867211478,0,4.42225108785563,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.85944283031671,0.7813353445238,5.75876118371178,8.82347232046521,2.73218193983378,12.62326917881,8.43508680436368,6.08261587317087,8.07605709511399,10.9534788208725,10.247182349881,17.3552084360233,17.4986909166855,9.65906309215001,14.3752564364972,0,1.45072428402269,0.336093799142464,6.17422646486273,9.45560351797897,6.70373719960675,4.24864567805155,5.81890077199236,3.1691570175309,5.76035704517525,3.55717918444456,12.1486461832989,16.8107281636386,12.0781619540837,17.3768064100675,15.7529505181837,2.17748185847803,1.89008313664367,1.68259969081106,7.7125765789027,9.27647871996777,1.71487118900936,2.30029130443767,2.75765635983006,8.8092704799511,15.1947932321373,15.0534402591119,4.61602007055678,4.57438218012048,3.64639359389732,17.3093459380856,16.8828783009504,17.2662019987795,3.83017161115768,4.6982654663704,3.54158947068071,3.40767869999328,6.8014404096107,4.34796733052517,1.72084775396277,0,0,0,0,1.40444420131752,3.2381761289831,3.89679006904303,0.70667914902068,3.23939865486365,1.28326477414318,0,0,2.81438353314578,2.28023878927589,2.52762222507392,1.02765491747154,1.55362730188303,5.04703272820404,1.38788261412909,1.21786191324856,1.15307748628029,0.904335843315735,1.29347577849275,1.88499886994513,1.73036477414062,2.31358971071859,0.884610551949874,2.10296904931632,2.42925670306433,1.93950101254089,1.86391761218122,4.68449275218475,3.14170060220183,0.255457055208591,0.359445373517761,0,0.508280908292259,25.314618059415,10.980014467647,6.03140890141749,14.7750672163435,15.3429274398198,21.6099566341943,17.5220564113178,4.88828946481518,2.23932547098167,0.758168275301024,1.26265113531884,1.69156575851515,1.14951052216736,1.62055916824814,2.41127708537144,2.24520447199382,0.640568601424249,1.49922759295566,2.06962696591213,1.07783996466421,1.70195472151037,2.81521798662318,2.19195732427575,3.61461423993277,3.48252166522167,2.46938563689532,2.7864797354589,0,0.257347907114715,0,1.65700618028402,2.57978665979206,2.70093092191522,3.31442629819294,2.36117078096885,2.31400669331067,3.0229412817553,2.41446061259657,3.85325629811659,5.10135534731789,2.79084688934462,2.59420190546738,2.33919979880532,3.95190207523891,2.41571553768669,11.1453672738987,6.48299057989492,0,0.264450566663544,1.49301775374664,0.928946687441754,1.41754207454303,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,1.25667604400135,0.994782360205754,1.36474860983384,0.898819408654221,0.648414149624083,0.995706366271836,1.70701110857774,1.37098215131675,3.38123207019241,2.24016460629846,1.74557238450863,1.82353131714828,1.45444035385792,1.18088118383682,0.784993639206874,1.1105744752962,0,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,0.287696137450811,0.810676133875177,0.274561413188081,0,1.11642284300551,1.24815069245824,0,0.538192240565737,0,6.09685527549795,0.947457058852424,2.11854469374634,2.37643120085263,2.11221223459652,1.50755631697634,2.14239276797412,1.95133647857799,4.57141917907954,4.20782910332672,6.37819074629948,3.60499292374624,4.83517949224508,4.19482269886384,12.0633027151418,3.80733978673097,1.47529281905711,0.827810238914197,25.0458920380955,16.2924244363162,4.91804836130026,2.27223834483936,3.15508219416257,2.73307121007647,3.01592756825919,2.86762557543062,2.89638276307112,2.83076530788832,3.23848561339915,2.33804686329049,4.74345333535828,12.5315313404505,3.40656204499845,2.49291845134157,4.39794790254655,4.45419332025846,2.65490276679926,2.6705869977048,0.906970670894253,0.565815239267694,0,0.922305443831782,2.06742634534577,2.54473610634254,2.85197902707777,0.632073515871632,2.10837217149998,4.12542172992747,9.19186935535228,1.62054984628179,1.81102157295856,1.07168517515796,2.12808280370728,2.49716344642899,3.29098041204242,4.56697423671899,1.40803024838226,4.2366414172764,0.661585194164886,2.14352128823924,2.26050197374268,1.62844897306021,0.835606408021955,1.64140899745061,0.874442509889552,21.8801856372401,1.36696704638282,4.33412422722767,1.29636169158798,0.376736914009382,0.820165366326151,0.457556346413045,1.01987057996313,0.979660166265606,1.38199973804424,2.86401185404534,2.05618395827738,2.43983360552218,1.18805874903981,2.09088296014469,1.09181281873089,1.75323650300267,2.39695021603474,2.09404753587224,1.03691978633434,2.4853572523477,0.56369293868419,2.0932316446157,1.48912641411388,2.13896307178452,2.71235629303235,1.520605129417,2.34714477291508,1.95306577265925,1.36317147753424,2.89900944991207,1.72818003754719,0.632022241256357,1.82452693761148,1.95150818613172,0.909445760844565,1.07416017400489,0.39736270956253,0.480781798079875,1.03382669022204,0.403865799792591,0.762068066549998,1.51239277705261,0.877120926657772,0.962118416403295,1.63627663054197,0.680191150845634,0,0,0,5.21611903886914,3.37828455812128,2.19781949120718,1.71494703263253,1.00314420807073,11.8597886949584,12.4287813856938,10.3121192419091,9.6237782112465,9.59115527678899,14.3524840504043,15.5255175053315,13.5096360967266,14.0474146785103,18.6393712230655,0.62272408550506,2.39414924040619,2.56100408631201,2.18796045361465,1.46729213839588,2.20612210140017,2.00022055021454,1.23621034343337,2.88827288632634,1.01078884705519,1.2673964994512,1.32038438970253,2.43467919421694,1.85672941974121,2.64203157195821,2.85776214769844,1.50649623728312,2.89363830695558,1.64834360321323,3.67997300335993,3.42869252385415,1.77475806159337,3.09967046931517,2.18019624948493,2.63506265162926,2.03075058940024,1.28049581010941,0.526139422875686,1.90125759384206,3.36685362994643,2.01679530811096,2.46261205938909,0.818462086339379,1.85924209423159,2.50778594275484,2.74791635731741,2.33931608445408,3.43793686477277,3.63447830930802,2.8676884485537,3.2461496986859 | |phase1_expression=4.16387002472464,0,0,0,0,0,0,0.516493293766305,0,0.70219357896598,0.171217968225505,0,0.342401459862411,0.874204024189974,0.333109761815663,0,0,0.473193248037357,0.274228867211478,0,4.42225108785563,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.85944283031671,0.7813353445238,5.75876118371178,8.82347232046521,2.73218193983378,12.62326917881,8.43508680436368,6.08261587317087,8.07605709511399,10.9534788208725,10.247182349881,17.3552084360233,17.4986909166855,9.65906309215001,14.3752564364972,0,1.45072428402269,0.336093799142464,6.17422646486273,9.45560351797897,6.70373719960675,4.24864567805155,5.81890077199236,3.1691570175309,5.76035704517525,3.55717918444456,12.1486461832989,16.8107281636386,12.0781619540837,17.3768064100675,15.7529505181837,2.17748185847803,1.89008313664367,1.68259969081106,7.7125765789027,9.27647871996777,1.71487118900936,2.30029130443767,2.75765635983006,8.8092704799511,15.1947932321373,15.0534402591119,4.61602007055678,4.57438218012048,3.64639359389732,17.3093459380856,16.8828783009504,17.2662019987795,3.83017161115768,4.6982654663704,3.54158947068071,3.40767869999328,6.8014404096107,4.34796733052517,1.72084775396277,0,0,0,0,1.40444420131752,3.2381761289831,3.89679006904303,0.70667914902068,3.23939865486365,1.28326477414318,0,0,2.81438353314578,2.28023878927589,2.52762222507392,1.02765491747154,1.55362730188303,5.04703272820404,1.38788261412909,1.21786191324856,1.15307748628029,0.904335843315735,1.29347577849275,1.88499886994513,1.73036477414062,2.31358971071859,0.884610551949874,2.10296904931632,2.42925670306433,1.93950101254089,1.86391761218122,4.68449275218475,3.14170060220183,0.255457055208591,0.359445373517761,0,0.508280908292259,25.314618059415,10.980014467647,6.03140890141749,14.7750672163435,15.3429274398198,21.6099566341943,17.5220564113178,4.88828946481518,2.23932547098167,0.758168275301024,1.26265113531884,1.69156575851515,1.14951052216736,1.62055916824814,2.41127708537144,2.24520447199382,0.640568601424249,1.49922759295566,2.06962696591213,1.07783996466421,1.70195472151037,2.81521798662318,2.19195732427575,3.61461423993277,3.48252166522167,2.46938563689532,2.7864797354589,0,0.257347907114715,0,1.65700618028402,2.57978665979206,2.70093092191522,3.31442629819294,2.36117078096885,2.31400669331067,3.0229412817553,2.41446061259657,3.85325629811659,5.10135534731789,2.79084688934462,2.59420190546738,2.33919979880532,3.95190207523891,2.41571553768669,11.1453672738987,6.48299057989492,0,0.264450566663544,1.49301775374664,0.928946687441754,1.41754207454303,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,1.25667604400135,0.994782360205754,1.36474860983384,0.898819408654221,0.648414149624083,0.995706366271836,1.70701110857774,1.37098215131675,3.38123207019241,2.24016460629846,1.74557238450863,1.82353131714828,1.45444035385792,1.18088118383682,0.784993639206874,1.1105744752962,0,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,0.287696137450811,0.810676133875177,0.274561413188081,0,1.11642284300551,1.24815069245824,0,0.538192240565737,0,6.09685527549795,0.947457058852424,2.11854469374634,2.37643120085263,2.11221223459652,1.50755631697634,2.14239276797412,1.95133647857799,4.57141917907954,4.20782910332672,6.37819074629948,3.60499292374624,4.83517949224508,4.19482269886384,12.0633027151418,3.80733978673097,1.47529281905711,0.827810238914197,25.0458920380955,16.2924244363162,4.91804836130026,2.27223834483936,3.15508219416257,2.73307121007647,3.01592756825919,2.86762557543062,2.89638276307112,2.83076530788832,3.23848561339915,2.33804686329049,4.74345333535828,12.5315313404505,3.40656204499845,2.49291845134157,4.39794790254655,4.45419332025846,2.65490276679926,2.6705869977048,0.906970670894253,0.565815239267694,0,0.922305443831782,2.06742634534577,2.54473610634254,2.85197902707777,0.632073515871632,2.10837217149998,4.12542172992747,9.19186935535228,1.62054984628179,1.81102157295856,1.07168517515796,2.12808280370728,2.49716344642899,3.29098041204242,4.56697423671899,1.40803024838226,4.2366414172764,0.661585194164886,2.14352128823924,2.26050197374268,1.62844897306021,0.835606408021955,1.64140899745061,0.874442509889552,21.8801856372401,1.36696704638282,4.33412422722767,1.29636169158798,0.376736914009382,0.820165366326151,0.457556346413045,1.01987057996313,0.979660166265606,1.38199973804424,2.86401185404534,2.05618395827738,2.43983360552218,1.18805874903981,2.09088296014469,1.09181281873089,1.75323650300267,2.39695021603474,2.09404753587224,1.03691978633434,2.4853572523477,0.56369293868419,2.0932316446157,1.48912641411388,2.13896307178452,2.71235629303235,1.520605129417,2.34714477291508,1.95306577265925,1.36317147753424,2.89900944991207,1.72818003754719,0.632022241256357,1.82452693761148,1.95150818613172,0.909445760844565,1.07416017400489,0.39736270956253,0.480781798079875,1.03382669022204,0.403865799792591,0.762068066549998,1.51239277705261,0.877120926657772,0.962118416403295,1.63627663054197,0.680191150845634,0,0,0,5.21611903886914,3.37828455812128,2.19781949120718,1.71494703263253,1.00314420807073,11.8597886949584,12.4287813856938,10.3121192419091,9.6237782112465,9.59115527678899,14.3524840504043,15.5255175053315,13.5096360967266,14.0474146785103,18.6393712230655,0.62272408550506,2.39414924040619,2.56100408631201,2.18796045361465,1.46729213839588,2.20612210140017,2.00022055021454,1.23621034343337,2.88827288632634,1.01078884705519,1.2673964994512,1.32038438970253,2.43467919421694,1.85672941974121,2.64203157195821,2.85776214769844,1.50649623728312,2.89363830695558,1.64834360321323,3.67997300335993,3.42869252385415,1.77475806159337,3.09967046931517,2.18019624948493,2.63506265162926,2.03075058940024,1.28049581010941,0.526139422875686,1.90125759384206,3.36685362994643,2.01679530811096,2.46261205938909,0.818462086339379,1.85924209423159,2.50778594275484,2.74791635731741,2.33931608445408,3.43793686477277,3.63447830930802,2.8676884485537,3.2461496986859 | ||
|short_description=p2@Timp2 | |short_description=p2@Timp2 | ||
}} | }} |
Latest revision as of 01:42, 27 September 2015
Short description: | p2@Timp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Timp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:866 |
Association with transcript: | 33bp_to_NM_011594, uc007mow.1_5end |
EntrezGene: | Timp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.65e-13 | 44 |
neurectodermal cell | 3.65e-13 | 44 |
neural cell | 5.48e-13 | 43 |
electrically responsive cell | 1.61e-10 | 39 |
electrically active cell | 1.61e-10 | 39 |
neuron | 4.93e-08 | 33 |
neuronal stem cell | 4.93e-08 | 33 |
neuroblast | 4.93e-08 | 33 |
electrically signaling cell | 4.93e-08 | 33 |