FFCP PHASE1:Mm9::chr1:33871252..33871313,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:33871252..33871313,-
|short_description=p2@Zfp451
|description=CAGE_peak_2_at_Zfp451_5end
|association_with_transcript=0bp_to_ENSMUST00000115164,ENSMUST000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=98403 | |EntrezGene=98403 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=782 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z3R7,D3Z6Z4,Q8C0P7,Q8VCL4 | |UniProt=D3Z3R7,D3Z6Z4,Q8C0P7,Q8VCL4 | ||
|association_with_transcript=0bp_to_ENSMUST00000115164,ENSMUST00000143591,ENSMUST00000151055,NM_133817,uc007anz.1,uc007aoa.1,uc007aob.1_5end | |||
|cluster_id=chr1:33871252..33871313,- | |||
|description=CAGE_peak_2_at_Zfp451_5end | |||
|id=chr1:33871252..33871313,- | |||
|ontology_enrichment_celltype=CL:0000393!1.85e-09!39;CL:0000211!1.85e-09!39;CL:0000540!4.03e-09!33;CL:0000047!4.03e-09!33;CL:0000031!4.03e-09!33;CL:0000404!4.03e-09!33;CL:0000117!1.67e-07!23;CL:0000337!1.67e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.85e-09,39;CL:0000211,1.85e-09,39;CL:0000540,4.03e-09,33;CL:0000047,4.03e-09,33;CL:0000031,4.03e-09,33;CL:0000404,4.03e-09,33;CL:0000117,1.67e-07,23;CL:0000337,1.67e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-16!75;UBERON:0001016!3.53e-16!75;UBERON:0001017!4.84e-16!73;UBERON:0005743!4.84e-16!73;UBERON:0002346!2.14e-15!71;UBERON:0003075!2.14e-15!71;UBERON:0007284!2.14e-15!71;UBERON:0004121!4.34e-15!102;UBERON:0000924!4.34e-15!102;UBERON:0006601!4.34e-15!102;UBERON:0001049!1.53e-14!52;UBERON:0005068!1.53e-14!52;UBERON:0006241!1.53e-14!52;UBERON:0007135!1.53e-14!52;UBERON:0000033!8.13e-14!63;UBERON:0000955!1.12e-13!50;UBERON:0006238!1.12e-13!50;UBERON:0002616!1.51e-13!49;UBERON:0003056!6.11e-13!49;UBERON:0003080!9.36e-12!40;UBERON:0002780!2.45e-11!39;UBERON:0001890!2.45e-11!39;UBERON:0006240!2.45e-11!39;UBERON:0002020!4.31e-11!34;UBERON:0000153!2.54e-10!94;UBERON:0007811!4.79e-09!86;UBERON:0002791!4.88e-09!29;UBERON:0003528!4.88e-09!29;UBERON:0001893!4.88e-09!29;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.01e-16,64;UBERON:0003075,3.01e-16,64;UBERON:0007284,3.01e-16,64;UBERON:0001016,3.53e-16,75;UBERON:0001017,4.84e-16,73;UBERON:0000073,9.86e-16,54;UBERON:0004121,1.81e-15,95;UBERON:0000924,1.81e-15,95;UBERON:0006601,1.81e-15,95;UBERON:0010371,1.82e-15,73;UBERON:0001049,1.53e-14,52;UBERON:0005068,1.53e-14,52;UBERON:0006241,1.53e-14,52;UBERON:0007135,1.53e-14,52;UBERON:0003056,6.11e-13,49;UBERON:0010314,6.30e-13,92;UBERON:0000955,4.46e-12,47;UBERON:0006238,4.46e-12,47;UBERON:0002616,6.04e-12,46;UBERON:0003080,9.36e-12,40;UBERON:0002780,2.45e-11,39;UBERON:0001890,2.45e-11,39;UBERON:0006240,2.45e-11,39;UBERON:0002020,4.31e-11,34;UBERON:0003528,4.88e-09,29;UBERON:0002791,4.88e-09,29;UBERON:0001893,4.88e-09,29;UBERON:0002021,2.34e-07,10;UBERON:0000411,2.34e-07,10;UBERON:0001950,2.34e-07,10 | |||
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| ||
|short_description=p2@Zfp451 | |||
}} | }} |
Latest revision as of 01:43, 27 September 2015
Short description: | p2@Zfp451 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp451_5end |
Coexpression cluster: | MCL_coexpression_mm9:782 |
Association with transcript: | 0bp_to_ENSMUST00000115164, ENSMUST00000143591, ENSMUST00000151055, NM_133817, uc007anz.1, uc007aoa.1, uc007aob.1_5end |
EntrezGene: | Zfp451 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.85e-09 | 39 |
electrically active cell | 1.85e-09 | 39 |
neuron | 4.03e-09 | 33 |
neuronal stem cell | 4.03e-09 | 33 |
neuroblast | 4.03e-09 | 33 |
electrically signaling cell | 4.03e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.67e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.01e-16 | 64 |
neural plate | 3.01e-16 | 64 |
presumptive neural plate | 3.01e-16 | 64 |
nervous system | 3.53e-16 | 75 |
central nervous system | 4.84e-16 | 73 |
regional part of nervous system | 9.86e-16 | 54 |
ectoderm-derived structure | 1.81e-15 | 95 |
ectoderm | 1.81e-15 | 95 |
presumptive ectoderm | 1.81e-15 | 95 |
ecto-epithelium | 1.82e-15 | 73 |
neural tube | 1.53e-14 | 52 |
neural rod | 1.53e-14 | 52 |
future spinal cord | 1.53e-14 | 52 |
neural keel | 1.53e-14 | 52 |
pre-chordal neural plate | 6.11e-13 | 49 |
structure with developmental contribution from neural crest | 6.30e-13 | 92 |
brain | 4.46e-12 | 47 |
future brain | 4.46e-12 | 47 |
regional part of brain | 6.04e-12 | 46 |
anterior neural tube | 9.36e-12 | 40 |
regional part of forebrain | 2.45e-11 | 39 |
forebrain | 2.45e-11 | 39 |
future forebrain | 2.45e-11 | 39 |
gray matter | 4.31e-11 | 34 |
brain grey matter | 4.88e-09 | 29 |
regional part of telencephalon | 4.88e-09 | 29 |
telencephalon | 4.88e-09 | 29 |
occipital lobe | 2.34e-07 | 10 |
visual cortex | 2.34e-07 | 10 |
neocortex | 2.34e-07 | 10 |