FFCP PHASE1:Mm9::chr15:78004456..78004519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67042 | |EntrezGene=67042 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=735 | |MCL_coexpression_id=735 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D0P8 | |UniProt=Q9D0P8 | ||
|association_with_transcript=18bp_to_ENSMUST00000016781,NM_025931,uc007wor.1_5end | |association_with_transcript=18bp_to_ENSMUST00000016781,NM_025931,uc007wor.1_5end | ||
|cluster_id=chr15:78004456..78004519,- | |||
|description=CAGE_peak_1_at_Ift27_5end | |description=CAGE_peak_1_at_Ift27_5end | ||
|id=chr15:78004456..78004519,- | |id=chr15:78004456..78004519,- | ||
|ontology_enrichment_celltype=CL:0002319!1.06e-15!43;CL:0000221!2.16e-15!44;CL:0000133!2.16e-15!44;CL:0000540!2.69e-12!33;CL:0000047!2.69e-12!33;CL:0000031!2.69e-12!33;CL:0000404!2.69e-12!33;CL:0000117!2.22e-10!23;CL:0000337!2.22e-10!23;CL:0000055!3.38e-10!50;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39 | |ontology_enrichment_celltype=CL:0002319!1.06e-15!43;CL:0000221!2.16e-15!44;CL:0000133!2.16e-15!44;CL:0000540!2.69e-12!33;CL:0000047!2.69e-12!33;CL:0000031!2.69e-12!33;CL:0000404!2.69e-12!33;CL:0000117!2.22e-10!23;CL:0000337!2.22e-10!23;CL:0000055!3.38e-10!50;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.06e-15,43;CL:0000221,2.16e-15,44;CL:0000133,2.16e-15,44;CL:0000540,2.69e-12,33;CL:0000047,2.69e-12,33;CL:0000031,2.69e-12,33;CL:0000404,2.69e-12,33;CL:0000117,2.22e-10,23;CL:0000337,2.22e-10,23;CL:0000393,7.81e-08,39;CL:0000211,7.81e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.96e-22!73;UBERON:0005743!1.96e-22!73;UBERON:0000073!3.95e-21!75;UBERON:0001016!3.95e-21!75;UBERON:0004121!5.89e-17!102;UBERON:0000924!5.89e-17!102;UBERON:0006601!5.89e-17!102;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0001049!3.94e-15!52;UBERON:0005068!3.94e-15!52;UBERON:0006241!3.94e-15!52;UBERON:0007135!3.94e-15!52;UBERON:0000033!2.75e-14!63;UBERON:0003056!5.94e-14!49;UBERON:0000955!2.88e-13!50;UBERON:0006238!2.88e-13!50;UBERON:0002616!4.87e-13!49;UBERON:0000153!2.90e-12!94;UBERON:0003080!3.56e-12!40;UBERON:0002780!3.97e-12!39;UBERON:0001890!3.97e-12!39;UBERON:0006240!3.97e-12!39;UBERON:0007811!1.27e-11!86;UBERON:0002020!6.85e-11!34;UBERON:0002791!8.92e-09!29;UBERON:0003528!8.92e-09!29;UBERON:0001893!8.92e-09!29;UBERON:0000475!2.36e-07!200 | |ontology_enrichment_uberon=UBERON:0001017!1.96e-22!73;UBERON:0005743!1.96e-22!73;UBERON:0000073!3.95e-21!75;UBERON:0001016!3.95e-21!75;UBERON:0004121!5.89e-17!102;UBERON:0000924!5.89e-17!102;UBERON:0006601!5.89e-17!102;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0001049!3.94e-15!52;UBERON:0005068!3.94e-15!52;UBERON:0006241!3.94e-15!52;UBERON:0007135!3.94e-15!52;UBERON:0000033!2.75e-14!63;UBERON:0003056!5.94e-14!49;UBERON:0000955!2.88e-13!50;UBERON:0006238!2.88e-13!50;UBERON:0002616!4.87e-13!49;UBERON:0000153!2.90e-12!94;UBERON:0003080!3.56e-12!40;UBERON:0002780!3.97e-12!39;UBERON:0001890!3.97e-12!39;UBERON:0006240!3.97e-12!39;UBERON:0007811!1.27e-11!86;UBERON:0002020!6.85e-11!34;UBERON:0002791!8.92e-09!29;UBERON:0003528!8.92e-09!29;UBERON:0001893!8.92e-09!29;UBERON:0000475!2.36e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-22,73;UBERON:0001016,3.95e-21,75;UBERON:0004121,8.57e-18,95;UBERON:0000924,8.57e-18,95;UBERON:0006601,8.57e-18,95;UBERON:0002346,1.08e-17,64;UBERON:0003075,1.08e-17,64;UBERON:0007284,1.08e-17,64;UBERON:0000073,2.83e-15,54;UBERON:0001049,3.94e-15,52;UBERON:0005068,3.94e-15,52;UBERON:0006241,3.94e-15,52;UBERON:0007135,3.94e-15,52;UBERON:0003056,5.94e-14,49;UBERON:0010371,9.37e-14,73;UBERON:0000955,4.77e-13,47;UBERON:0006238,4.77e-13,47;UBERON:0002616,8.00e-13,46;UBERON:0003080,3.56e-12,40;UBERON:0002780,3.97e-12,39;UBERON:0001890,3.97e-12,39;UBERON:0006240,3.97e-12,39;UBERON:0002020,6.85e-11,34;UBERON:0010314,1.63e-09,92;UBERON:0003528,8.92e-09,29;UBERON:0002791,8.92e-09,29;UBERON:0001893,8.92e-09,29 | |||
|phase1_expression=29.1470901730725,0.348975407639361,2.72999543633722,1.81478526784098,0,4.19698179779725,3.73780224952841,9.94249590500137,1.40788722151667,1.87251621057595,2.73948749160808,1.99430397488341,14.7232627740837,13.2004807652686,44.6367080832988,30.5737653758637,46.1710839564577,24.4483178152634,15.219702130237,26.7365480632759,32.5715801278597,39.4185076267515,40.224767527396,5.59973479776923,6.65286915094793,1.14846392823004,3.4460959692726,3.878482188346,5.51067916423484,4.53654233567875,6.43018480900384,33.0215950199008,35.0586928923205,15.8481681015439,16.1756907060714,18.2858109894342,17.3543952823014,10.0447591376858,15.626706890476,7.85285615960697,5.88231488031014,2.04913645487534,6.79714494243615,13.7227531593379,12.9762471960979,10.4621648732158,92.3221786330686,86.3379619266568,52.0656253080698,78.3552493269362,53.0548537960124,66.1261796078869,15.268217151254,15.2326049822382,14.1159395639835,11.3194151855817,16.3324060765091,15.9858348606007,57.2555584232662,54.4860708650194,53.2418378945191,45.4051672972637,55.1362773588906,20.6976934974722,48.4544517657817,31.2611250576284,50.6324186776104,107.581125490035,57.6514244435136,63.4527910158946,78.0305606613627,49.9889222706656,49.695421714113,64.3076695878509,55.8779096036318,83.6489095815119,39.6417171597799,26.3035916455487,26.8811433198426,54.3371505448399,41.8098531263012,46.3612899795516,39.6439858581961,39.9561453122493,25.9757021220577,40.6587447953661,41.5725307933381,47.3454592396263,9.76867893998074,21.0844652697932,25.218210517046,6.0229671388697,4.75979933595425,10.7940638327563,9.74664626171504,4.03224198387602,12.3591089715942,10.0553890321054,13.2490862347463,12.3668851078619,23.0983208433756,8.98285341900225,7.64415719119937,21.3320010945999,19.9171757730317,20.7755089689581,17.6933555755174,10.6191008138726,20.7150306917737,17.5161724096493,32.4417561052674,28.010824004717,27.443244173471,21.1011696773672,21.4011446986983,19.729654838759,7.41584903203122,13.013942122792,25.6537060065464,21.8385247429002,26.5009822152472,25.6983884161668,24.2309289583559,24.3008061519584,25.5524982312415,12.7728527604296,28.515999632409,34.1944556666242,21.0936576941287,30.5572904385838,27.9075367719362,64.2093739296737,29.3763101124947,22.2472447877388,31.7915708176127,27.2565321953833,28.4131825142382,20.9003710624956,24.0086620511991,13.0473950649614,50.7469727554545,40.2328682758578,47.8965265282229,38.4297285481073,45.3803449339357,48.2988725473884,44.0398105430725,20.6962696591213,65.9638058374497,37.632109953396,33.9585669636421,37.0440787802601,30.3071501655902,18.4573648256748,19.9608672315705,33.4377568255069,25.9818879305897,32.4258362964541,30.689657934724,22.5767092063697,32.3645962773913,18.3663302690235,19.8865577891577,17.3152523937715,25.7626078521922,17.9051137457814,16.901224288176,15.6465558772007,17.9370236405694,17.237583728305,17.2676564332673,16.5205985790626,17.7835593385751,15.7021509949635,24.814213930567,51.7610200267801,3.30418782983798,8.19796756656987,46.496838616681,32.7453707323218,24.4848176511977,20.9750865608276,16.0112191568307,19.5932394895936,12.3377556001573,11.5289268306808,11.3100843960121,12.9321706826748,14.2323783596958,10.7858329038507,13.6166971421057,5.97423819763102,68.2804443431094,32.7893231189922,45.0830942692322,32.9915151109409,32.1961128698259,22.9344131041342,24.3460667928391,20.6654207171443,21.6658244421097,19.2499575718009,5.63259991465583,36.0385428346763,35.3806191203765,37.7768348806554,35.500521242988,25.3236017740038,23.1709525121092,24.4541716833189,20.7533090272045,24.7105271869273,12.9391385874619,17.8627654880882,12.4815069245824,10.6083128737787,8.07288360848605,5.78932225636041,32.3318082791558,31.26608294213,40.0893842047384,33.2700368119369,33.5607055052558,24.1209010716215,28.0891496245496,18.3425628986331,26.1674339216277,23.9181864820677,23.1209414553356,20.646777654183,16.9231282228578,21.1187625529007,12.0633027151418,15.7732648307426,12.7858710984949,8.27810238914197,27.1330497079368,23.7939723782172,13.9344703570174,11.1087207969924,32.8128548192907,31.6255382880277,37.6990946032398,35.3673820969777,32.5286064160295,42.4614796183249,48.5772842009873,42.3770993971402,29.2512955680427,35.024023489977,27.8202567008207,43.0918760874758,30.9485222771795,37.6131880377381,29.2039304347918,47.0994434140664,41.7206508611356,33.383099116794,35.4362271456927,20.9055900601871,12.9214146584111,23.2661586865604,20.6768479463138,27.495197940416,21.0837217149998,21.6584640821192,37.4483566329167,45.3753956958902,62.4802442670704,42.8674070063185,41.3202744386497,42.986885042099,45.9091767479918,53.5858310441695,12.4376005273766,12.4980921809654,21.1707262132763,18.6321465823872,19.6986600569005,19.9635781512196,17.6671069124642,17.7272171724666,13.9910801582328,30.5951748317341,35.7120140867512,33.2282857420788,27.7791791054568,44.4549558531071,48.663145068685,30.656275209674,20.3974115992626,18.8934460636938,17.8277966207707,17.184071124272,48.8739110082854,26.431530726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|phase1_expression=29.1470901730725,0.348975407639361,2.72999543633722,1.81478526784098,0,4.19698179779725,3.73780224952841,9.94249590500137,1.40788722151667,1.87251621057595,2.73948749160808,1.99430397488341,14.7232627740837,13.2004807652686,44.6367080832988,30.5737653758637,46.1710839564577,24.4483178152634,15.219702130237,26.7365480632759,32.5715801278597,39.4185076267515,40.224767527396,5.59973479776923,6.65286915094793,1.14846392823004,3.4460959692726,3.878482188346,5.51067916423484,4.53654233567875,6.43018480900384,33.0215950199008,35.0586928923205,15.8481681015439,16.1756907060714,18.2858109894342,17.3543952823014,10.0447591376858,15.626706890476,7.85285615960697,5.88231488031014,2.04913645487534,6.79714494243615,13.7227531593379,12.9762471960979,10.4621648732158,92.3221786330686,86.3379619266568,52.0656253080698,78.3552493269362,53.0548537960124,66.1261796078869,15.268217151254,15.2326049822382,14.1159395639835,11.3194151855817,16.3324060765091,15.9858348606007,57.2555584232662,54.4860708650194,53.2418378945191,45.4051672972637,55.1362773588906,20.6976934974722,48.4544517657817,31.2611250576284,50.6324186776104,107.581125490035,57.6514244435136,63.4527910158946,78.0305606613627,49.9889222706656,49.695421714113,64.3076695878509,55.8779096036318,83.6489095815119,39.6417171597799,26.3035916455487,26.8811433198426,54.3371505448399,41.8098531263012,46.3612899795516,39.6439858581961,39.9561453122493,25.9757021220577,40.6587447953661,41.5725307933381,47.3454592396263,9.76867893998074,21.0844652697932,25.218210517046,6.0229671388697,4.75979933595425,10.7940638327563,9.74664626171504,4.03224198387602,12.3591089715942,10.0553890321054,13.2490862347463,12.3668851078619,23.0983208433756,8.98285341900225,7.64415719119937,21.3320010945999,19.9171757730317,20.7755089689581,17.6933555755174,10.6191008138726,20.7150306917737,17.5161724096493,32.4417561052674,28.010824004717,27.443244173471,21.1011696773672,21.4011446986983,19.729654838759,7.41584903203122,13.013942122792,25.6537060065464,21.8385247429002,26.5009822152472,25.6983884161668,24.2309289583559,24.3008061519584,25.5524982312415,12.7728527604296,28.515999632409,34.1944556666242,21.0936576941287,30.5572904385838,27.9075367719362,64.2093739296737,29.3763101124947,22.2472447877388,31.7915708176127,27.2565321953833,28.4131825142382,20.9003710624956,24.0086620511991,13.0473950649614,50.7469727554545,40.2328682758578,47.8965265282229,38.4297285481073,45.3803449339357,48.2988725473884,44.0398105430725,20.6962696591213,65.9638058374497,37.632109953396,33.9585669636421,37.0440787802601,30.3071501655902,18.4573648256748,19.9608672315705,33.4377568255069,25.9818879305897,32.4258362964541,30.689657934724,22.5767092063697,32.3645962773913,18.3663302690235,19.8865577891577,17.3152523937715,25.7626078521922,17.9051137457814,16.901224288176,15.6465558772007,17.9370236405694,17.237583728305,17.2676564332673,16.5205985790626,17.7835593385751,15.7021509949635,24.814213930567,51.7610200267801,3.30418782983798,8.19796756656987,46.496838616681,32.7453707323218,24.4848176511977,20.9750865608276,16.0112191568307,19.5932394895936,12.3377556001573,11.5289268306808,11.3100843960121,12.9321706826748,14.2323783596958,10.7858329038507,13.6166971421057,5.97423819763102,68.2804443431094,32.7893231189922,45.0830942692322,32.9915151109409,32.1961128698259,22.9344131041342,24.3460667928391,20.6654207171443,21.6658244421097,19.2499575718009,5.63259991465583,36.0385428346763,35.3806191203765,37.7768348806554,35.500521242988,25.3236017740038,23.1709525121092,24.4541716833189,20.7533090272045,24.7105271869273,12.9391385874619,17.8627654880882,12.4815069245824,10.6083128737787,8.07288360848605,5.78932225636041,32.3318082791558,31.26608294213,40.0893842047384,33.2700368119369,33.5607055052558,24.1209010716215,28.0891496245496,18.3425628986331,26.1674339216277,23.9181864820677,23.1209414553356,20.646777654183,16.9231282228578,21.1187625529007,12.0633027151418,15.7732648307426,12.7858710984949,8.27810238914197,27.1330497079368,23.7939723782172,13.9344703570174,11.1087207969924,32.8128548192907,31.6255382880277,37.6990946032398,35.3673820969777,32.5286064160295,42.4614796183249,48.5772842009873,42.3770993971402,29.2512955680427,35.024023489977,27.8202567008207,43.0918760874758,30.9485222771795,37.6131880377381,29.2039304347918,47.0994434140664,41.7206508611356,33.383099116794,35.4362271456927,20.9055900601871,12.9214146584111,23.2661586865604,20.6768479463138,27.495197940416,21.0837217149998,21.6584640821192,37.4483566329167,45.3753956958902,62.4802442670704,42.8674070063185,41.3202744386497,42.986885042099,45.9091767479918,53.5858310441695,12.4376005273766,12.4980921809654,21.1707262132763,18.6321465823872,19.6986600569005,19.9635781512196,17.6671069124642,17.7272171724666,13.9910801582328,30.5951748317341,35.7120140867512,33.2282857420788,27.7791791054568,44.4549558531071,48.663145068685,30.656275209674,20.3974115992626,18.8934460636938,17.8277966207707,17.184071124272,48.8739110082854,26.431530726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| ||
|short_description=p1@Ift27 | |short_description=p1@Ift27 | ||
}} | }} |
Latest revision as of 01:46, 27 September 2015
Short description: | p1@Ift27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ift27_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | 18bp_to_ENSMUST00000016781, NM_025931, uc007wor.1_5end |
EntrezGene: | Ift27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.06e-15 | 43 |
ectodermal cell | 2.16e-15 | 44 |
neurectodermal cell | 2.16e-15 | 44 |
neuron | 2.69e-12 | 33 |
neuronal stem cell | 2.69e-12 | 33 |
neuroblast | 2.69e-12 | 33 |
electrically signaling cell | 2.69e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.22e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-10 | 23 |
electrically responsive cell | 7.81e-08 | 39 |
electrically active cell | 7.81e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.96e-22 | 73 |
nervous system | 3.95e-21 | 75 |
ectoderm-derived structure | 8.57e-18 | 95 |
ectoderm | 8.57e-18 | 95 |
presumptive ectoderm | 8.57e-18 | 95 |
neurectoderm | 1.08e-17 | 64 |
neural plate | 1.08e-17 | 64 |
presumptive neural plate | 1.08e-17 | 64 |
regional part of nervous system | 2.83e-15 | 54 |
neural tube | 3.94e-15 | 52 |
neural rod | 3.94e-15 | 52 |
future spinal cord | 3.94e-15 | 52 |
neural keel | 3.94e-15 | 52 |
pre-chordal neural plate | 5.94e-14 | 49 |
ecto-epithelium | 9.37e-14 | 73 |
brain | 4.77e-13 | 47 |
future brain | 4.77e-13 | 47 |
regional part of brain | 8.00e-13 | 46 |
anterior neural tube | 3.56e-12 | 40 |
regional part of forebrain | 3.97e-12 | 39 |
forebrain | 3.97e-12 | 39 |
future forebrain | 3.97e-12 | 39 |
gray matter | 6.85e-11 | 34 |
structure with developmental contribution from neural crest | 1.63e-09 | 92 |
brain grey matter | 8.92e-09 | 29 |
regional part of telencephalon | 8.92e-09 | 29 |
telencephalon | 8.92e-09 | 29 |