FFCP PHASE1:Mm9::chr1:37552967..37553001,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:37552967..37553001,-
|short_description=p4@Mgat4a
|description=CAGE_peak_4_at_Mgat4a_5end
|association_with_transcript=0bp_to_ENSMUST00000143636,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269181 | |EntrezGene=269181 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z166,D6RG46 | |UniProt=D3Z166,D6RG46 | ||
|association_with_transcript=0bp_to_ENSMUST00000143636,ENSMUST00000149791_5end | |||
|cluster_id=chr1:37552967..37553001,- | |||
|description=CAGE_peak_4_at_Mgat4a_5end | |||
|id=chr1:37552967..37553001,- | |||
|ontology_enrichment_celltype=CL:0000988!3.50e-11!32;CL:0002032!3.50e-11!32;CL:0000037!3.50e-11!32;CL:0000566!3.50e-11!32;CL:0000837!3.50e-11!32;CL:0002031!1.08e-08!25;CL:0002320!2.01e-07!46;CL:0000134!2.01e-07!46;CL:0000838!4.37e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.17e-17,32;CL:0002032,7.17e-17,32;CL:0000037,7.17e-17,32;CL:0000837,7.17e-17,32;CL:0000049,2.86e-12,19;CL:0002320,7.25e-12,46;CL:0000134,7.25e-12,46;CL:0002031,1.32e-11,25;CL:0000553,3.21e-09,6;CL:0000556,3.21e-09,6;CL:0000763,3.68e-09,16;CL:0000219,4.18e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.73e-19!70;UBERON:0002193!5.56e-17!48;UBERON:0002390!1.81e-15!45;UBERON:0003061!1.81e-15!45;UBERON:0005057!2.27e-11!51;UBERON:0003081!2.28e-09!88;UBERON:0004177!2.85e-09!29;UBERON:0000926!6.84e-08!193;UBERON:0004120!6.84e-08!193;UBERON:0006603!6.84e-08!193;UBERON:0002384!2.01e-07!46;UBERON:0002371!3.44e-07!16;UBERON:0003408!9.76e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.05e-21,48;UBERON:0002405,6.05e-21,48;UBERON:0002390,1.68e-19,45;UBERON:0003061,1.68e-19,45;UBERON:0002371,1.35e-12,16;UBERON:0002384,7.25e-12,46;UBERON:0001474,8.23e-10,22;UBERON:0004765,8.23e-10,22;UBERON:0001434,8.23e-10,22;UBERON:0002204,3.33e-09,32;UBERON:0004177,9.68e-09,29;UBERON:0005057,9.68e-09,29;UBERON:0002106,8.66e-08,6;UBERON:0004457,8.66e-08,6;UBERON:0000042,8.66e-08,6;UBERON:0004854,8.66e-08,6;UBERON:0009034,8.66e-08,6;UBERON:0002095,8.66e-08,6;UBERON:0004782,8.66e-08,6;UBERON:0003281,8.66e-08,6;UBERON:0009664,8.66e-08,6;UBERON:0002296,8.66e-08,6;UBERON:0005602,8.66e-08,6;UBERON:0001179,8.66e-08,6;UBERON:0006293,8.66e-08,6;UBERON:0003081,1.49e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.74457637980571,0.84473233291,0.936258105287974,0.856089841127525,0.478632953972018,6.50562773738582,4.37102012094987,3.33109761815663,5.06188168474565,3.49780939064073,31.5462165358238,36.3353249055208,26.3121584114779,0.340173160604279,3.47518329203099,2.87319768052829,0.799962113967033,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0.204169356262369,15.0671387065287,7.0320181007142,6.80580867165938,40.58797267414,24.589637458504,13.1087795318411,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,28.8586082419307,2.90144856804538,8.4023449785616,0,0.85960031981627,0,0,0,0,0,0,1.3498495759221,2.96659908770092,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.25602267690966,41.9479371508418,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,8.84610551949874,0,0.441683036920787,0,3.72783522436244,0.292780797011547,0,2.04365644166873,4.55297473122497,3.59941638596045,3.81210681219194,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0,1.36847667671102,0.758168275301024,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0,3.51106593656617,3.60287069960601,3.12579849335152,0,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.584799949701329,0.658650345873152,0.134206418760372,0.210289948564127,0,3.96502539580558,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.964708639009667,1.01850340712568,0.287696137450811,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.538192240565737,2.41221760681684,5.35784251483154,0,0,0,0.469380496577004,0,0,0.195133647857799,1.26108115284953,0.664394068946325,0.159454768657487,1.96635977658886,3.10832967358612,2.4590339958857,4.52373851817817,4.35124547054968,1.47529281905711,1.10374698521893,0.160550589987792,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.824850614862677,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.704015124191131,0.42366414172764,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,9.22702756308404,1.03193433981611,3.33350149265481,1.50694765603753,5.05768642567793,6.86334519619568,10.7086410896129,11.7559219951873,9.81219814011409,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,2.4853572523477,0.56369293868419,0,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,5.05617793005085,0.405450430580328,0.308132871494482,1.68897069871134,0.358053391334963,0.993406773906324,1.32214994471966,0.886137163047463,1.9183625490148,1.905170166375,1.61321896218945,1.36441033035653,2.40529604100824,3.03879945672079,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,3.74457637980571,0.84473233291,0.936258105287974,0.856089841127525,0.478632953972018,6.50562773738582,4.37102012094987,3.33109761815663,5.06188168474565,3.49780939064073,31.5462165358238,36.3353249055208,26.3121584114779,0.340173160604279,3.47518329203099,2.87319768052829,0.799962113967033,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0.204169356262369,15.0671387065287,7.0320181007142,6.80580867165938,40.58797267414,24.589637458504,13.1087795318411,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,28.8586082419307,2.90144856804538,8.4023449785616,0,0.85960031981627,0,0,0,0,0,0,1.3498495759221,2.96659908770092,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.25602267690966,41.9479371508418,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,8.84610551949874,0,0.441683036920787,0,3.72783522436244,0.292780797011547,0,2.04365644166873,4.55297473122497,3.59941638596045,3.81210681219194,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0,1.36847667671102,0.758168275301024,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0,3.51106593656617,3.60287069960601,3.12579849335152,0,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.584799949701329,0.658650345873152,0.134206418760372,0.210289948564127,0,3.96502539580558,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.964708639009667,1.01850340712568,0.287696137450811,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.538192240565737,2.41221760681684,5.35784251483154,0,0,0,0.469380496577004,0,0,0.195133647857799,1.26108115284953,0.664394068946325,0.159454768657487,1.96635977658886,3.10832967358612,2.4590339958857,4.52373851817817,4.35124547054968,1.47529281905711,1.10374698521893,0.160550589987792,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.824850614862677,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.704015124191131,0.42366414172764,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,9.22702756308404,1.03193433981611,3.33350149265481,1.50694765603753,5.05768642567793,6.86334519619568,10.7086410896129,11.7559219951873,9.81219814011409,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,2.4853572523477,0.56369293868419,0,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,5.05617793005085,0.405450430580328,0.308132871494482,1.68897069871134,0.358053391334963,0.993406773906324,1.32214994471966,0.886137163047463,1.9183625490148,1.905170166375,1.61321896218945,1.36441033035653,2.40529604100824,3.03879945672079,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p4@Mgat4a | |||
}} | }} |
Latest revision as of 02:40, 27 September 2015
Short description: | p4@Mgat4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mgat4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000143636, ENSMUST00000149791_5end |
EntrezGene: | Mgat4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.17e-17 | 32 |
hematopoietic oligopotent progenitor cell | 7.17e-17 | 32 |
hematopoietic stem cell | 7.17e-17 | 32 |
hematopoietic multipotent progenitor cell | 7.17e-17 | 32 |
common myeloid progenitor | 2.86e-12 | 19 |
connective tissue cell | 7.25e-12 | 46 |
mesenchymal cell | 7.25e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.32e-11 | 25 |
megakaryocyte progenitor cell | 3.21e-09 | 6 |
megakaryocyte | 3.21e-09 | 6 |
myeloid cell | 3.68e-09 | 16 |
motile cell | 4.18e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.05e-21 | 48 |
immune system | 6.05e-21 | 48 |
hematopoietic system | 1.68e-19 | 45 |
blood island | 1.68e-19 | 45 |
bone marrow | 1.35e-12 | 16 |
connective tissue | 7.25e-12 | 46 |
bone element | 8.23e-10 | 22 |
skeletal element | 8.23e-10 | 22 |
skeletal system | 8.23e-10 | 22 |
musculoskeletal system | 3.33e-09 | 32 |
hemopoietic organ | 9.68e-09 | 29 |
immune organ | 9.68e-09 | 29 |
spleen | 8.66e-08 | 6 |
cavity lining | 8.66e-08 | 6 |
serous membrane | 8.66e-08 | 6 |
gastrointestinal system mesentery | 8.66e-08 | 6 |
stomach region | 8.66e-08 | 6 |
mesentery | 8.66e-08 | 6 |
gastrointestinal system serosa | 8.66e-08 | 6 |
mesentery of stomach | 8.66e-08 | 6 |
gut mesentery | 8.66e-08 | 6 |
dorsal mesentery | 8.66e-08 | 6 |
dorsal mesogastrium | 8.66e-08 | 6 |
peritoneal cavity | 8.66e-08 | 6 |
spleen primordium | 8.66e-08 | 6 |
lateral plate mesoderm | 1.49e-07 | 87 |