FFCP PHASE1:Mm9::chr11:120459849..120459863,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:120459849..120459863,+ to FFCP PHASE1:Mm9::chr11:120459849..120459863,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66156 | |EntrezGene=66156 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CPX9,A2ABX9 | |UniProt=Q9CPX9,A2ABX9 | ||
|association_with_transcript=3bp_to_ENSMUST00000093140,NM_001038230,uc007mtn.2_5end | |||
|cluster_id=chr11:120459849..120459863,+ | |||
|description=CAGE_peak_5_at_Anapc11_5end | |||
|id=chr11:120459849..120459863,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.26e-16!44;CL:0000133!1.26e-16!44;CL:0000055!2.64e-16!50;CL:0002319!3.14e-16!43;CL:0000540!2.03e-12!33;CL:0000047!2.03e-12!33;CL:0000031!2.03e-12!33;CL:0000404!2.03e-12!33;CL:0000393!3.73e-12!39;CL:0000211!3.73e-12!39;CL:0000117!9.71e-12!23;CL:0000337!9.71e-12!23;CL:0002321!5.08e-09!70;CL:0000220!5.08e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.52e-17,44;CL:0000133,4.52e-17,44;CL:0002319,1.24e-16,43;CL:0000117,5.70e-13,23;CL:0000337,5.70e-13,23;CL:0000540,6.79e-13,33;CL:0000047,6.79e-13,33;CL:0000031,6.79e-13,33;CL:0000404,6.79e-13,33;CL:0000393,5.33e-12,39;CL:0000211,5.33e-12,39;CL:0002321,1.60e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.42e-18!73;UBERON:0005743!9.42e-18!73;UBERON:0000073!1.55e-17!75;UBERON:0001016!1.55e-17!75;UBERON:0004121!2.19e-12!102;UBERON:0000924!2.19e-12!102;UBERON:0006601!2.19e-12!102;UBERON:0002346!2.83e-12!71;UBERON:0003075!2.83e-12!71;UBERON:0007284!2.83e-12!71;UBERON:0001049!5.83e-12!52;UBERON:0005068!5.83e-12!52;UBERON:0006241!5.83e-12!52;UBERON:0007135!5.83e-12!52;UBERON:0002616!1.11e-09!49;UBERON:0000955!1.19e-09!50;UBERON:0006238!1.19e-09!50;UBERON:0000033!1.27e-09!63;UBERON:0003056!4.90e-08!49;UBERON:0002780!1.36e-07!39;UBERON:0001890!1.36e-07!39;UBERON:0006240!1.36e-07!39;UBERON:0003080!2.10e-07!40;UBERON:0002020!2.96e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.84e-19,73;UBERON:0001016,4.34e-18,75;UBERON:0002346,2.37e-15,64;UBERON:0003075,2.37e-15,64;UBERON:0007284,2.37e-15,64;UBERON:0004121,1.39e-14,95;UBERON:0000924,1.39e-14,95;UBERON:0006601,1.39e-14,95;UBERON:0010314,3.59e-13,92;UBERON:0001049,5.48e-13,52;UBERON:0005068,5.48e-13,52;UBERON:0006241,5.48e-13,52;UBERON:0007135,5.48e-13,52;UBERON:0000073,5.95e-13,54;UBERON:0010371,2.54e-12,73;UBERON:0002616,4.28e-10,46;UBERON:0000955,4.63e-10,47;UBERON:0006238,4.63e-10,47;UBERON:0003056,4.88e-09,49;UBERON:0002780,1.89e-08,39;UBERON:0001890,1.89e-08,39;UBERON:0006240,1.89e-08,39;UBERON:0002020,4.47e-08,34;UBERON:0003080,6.44e-08,40 | |||
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| ||
|short_description=p5@Anapc11 | |||
}} | }} |
Latest revision as of 03:08, 27 September 2015
Short description: | p5@Anapc11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Anapc11_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENSMUST00000093140, NM_001038230, uc007mtn.2_5end |
EntrezGene: | Anapc11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.52e-17 | 44 |
neurectodermal cell | 4.52e-17 | 44 |
neural cell | 1.24e-16 | 43 |
CNS neuron (sensu Vertebrata) | 5.70e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.70e-13 | 23 |
neuron | 6.79e-13 | 33 |
neuronal stem cell | 6.79e-13 | 33 |
neuroblast | 6.79e-13 | 33 |
electrically signaling cell | 6.79e-13 | 33 |
electrically responsive cell | 5.33e-12 | 39 |
electrically active cell | 5.33e-12 | 39 |
embryonic cell | 1.60e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.84e-19 | 73 |
nervous system | 4.34e-18 | 75 |
neurectoderm | 2.37e-15 | 64 |
neural plate | 2.37e-15 | 64 |
presumptive neural plate | 2.37e-15 | 64 |
ectoderm-derived structure | 1.39e-14 | 95 |
ectoderm | 1.39e-14 | 95 |
presumptive ectoderm | 1.39e-14 | 95 |
structure with developmental contribution from neural crest | 3.59e-13 | 92 |
neural tube | 5.48e-13 | 52 |
neural rod | 5.48e-13 | 52 |
future spinal cord | 5.48e-13 | 52 |
neural keel | 5.48e-13 | 52 |
regional part of nervous system | 5.95e-13 | 54 |
ecto-epithelium | 2.54e-12 | 73 |
regional part of brain | 4.28e-10 | 46 |
brain | 4.63e-10 | 47 |
future brain | 4.63e-10 | 47 |
pre-chordal neural plate | 4.88e-09 | 49 |
regional part of forebrain | 1.89e-08 | 39 |
forebrain | 1.89e-08 | 39 |
future forebrain | 1.89e-08 | 39 |
gray matter | 4.47e-08 | 34 |
anterior neural tube | 6.44e-08 | 40 |