FFCP PHASE1:Mm9::chr6:38933302..38933316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21391 | |EntrezGene=21391 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=479 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000161360,uc009blf.1_5end | |association_with_transcript=0bp_to_ENSMUST00000161360,uc009blf.1_5end | ||
|cluster_id=chr6:38933302..38933316,+ | |||
|description=CAGE_peak_3_at_Tbxas1_5end | |description=CAGE_peak_3_at_Tbxas1_5end | ||
|id=chr6:38933302..38933316,+ | |id=chr6:38933302..38933316,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.23e-09,1;CL:0002078,6.23e-09,1;CL:0000115,6.23e-09,1;CL:0002262,6.23e-09,1;CL:1000398,6.23e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!2.17e-15!17;UBERON:0002113!1.47e-14!14;UBERON:0003918!1.47e-14!14;UBERON:0005095!1.47e-14!14;UBERON:0007687!1.47e-14!14;UBERON:0006554!2.23e-14!16;UBERON:0000489!1.50e-08!21;UBERON:0005172!2.94e-08!49;UBERON:0005173!2.94e-08!49;UBERON:0002417!2.94e-08!49;UBERON:0000916!2.94e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.87e-42,14;UBERON:0003918,6.87e-42,14;UBERON:0011143,6.87e-42,14;UBERON:0005095,6.87e-42,14;UBERON:0007687,6.87e-42,14;UBERON:0006554,1.81e-32,18;UBERON:0001008,9.88e-31,19;UBERON:0000489,9.43e-28,21;UBERON:0005172,2.31e-17,49;UBERON:0005173,2.31e-17,49;UBERON:0002417,2.31e-17,49;UBERON:0000916,2.31e-17,49;UBERON:0003104,8.98e-14,61;UBERON:0009142,8.98e-14,61;UBERON:0003103,3.25e-13,43;UBERON:0009569,1.17e-12,66;UBERON:0005177,2.04e-10,79;UBERON:0002100,5.08e-09,90;UBERON:0002394,6.23e-09,1;UBERON:0001281,6.23e-09,1;UBERON:0000353,6.23e-09,1;UBERON:0003497,6.23e-09,1;UBERON:0003909,6.23e-09,1;UBERON:0003928,6.23e-09,1;UBERON:0003835,6.23e-09,1;UBERON:0003513,6.23e-09,1;UBERON:0001280,6.23e-09,1;UBERON:0004647,6.23e-09,1;UBERON:0002294,6.23e-09,1;UBERON:0001173,6.23e-09,1;UBERON:0004912,6.23e-09,1;UBERON:0005171,6.23e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,10.4351215932604,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,1.25673363870702,4.50830942692322,3.05476991767971,6.59438456369928,2.80543279561274,10.813447848248,7.82333784291891,17.2698600625512,8.88459580236964,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,10.4351215932604,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,1.25673363870702,4.50830942692322,3.05476991767971,6.59438456369928,2.80543279561274,10.813447848248,7.82333784291891,17.2698600625512,8.88459580236964,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p3@Tbxas1 | |short_description=p3@Tbxas1 | ||
}} | }} |
Latest revision as of 03:41, 27 September 2015
Short description: | p3@Tbxas1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tbxas1_5end |
Coexpression cluster: | MCL_coexpression_mm9:479 |
Association with transcript: | 0bp_to_ENSMUST00000161360, uc009blf.1_5end |
EntrezGene: | Tbxas1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.23e-09 | 1 |
meso-epithelial cell | 6.23e-09 | 1 |
endothelial cell | 6.23e-09 | 1 |
endothelial cell of sinusoid | 6.23e-09 | 1 |
endothelial cell of hepatic sinusoid | 6.23e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 6.87e-42 | 14 |
kidney mesenchyme | 6.87e-42 | 14 |
upper urinary tract | 6.87e-42 | 14 |
kidney rudiment | 6.87e-42 | 14 |
kidney field | 6.87e-42 | 14 |
urinary system structure | 1.81e-32 | 18 |
renal system | 9.88e-31 | 19 |
cavitated compound organ | 9.43e-28 | 21 |
abdomen element | 2.31e-17 | 49 |
abdominal segment element | 2.31e-17 | 49 |
abdominal segment of trunk | 2.31e-17 | 49 |
abdomen | 2.31e-17 | 49 |
mesenchyme | 8.98e-14 | 61 |
entire embryonic mesenchyme | 8.98e-14 | 61 |
compound organ | 3.25e-13 | 43 |
subdivision of trunk | 1.17e-12 | 66 |
trunk region element | 2.04e-10 | 79 |
trunk | 5.08e-09 | 90 |
bile duct | 6.23e-09 | 1 |
hepatic sinusoid | 6.23e-09 | 1 |
parenchyma | 6.23e-09 | 1 |
abdomen blood vessel | 6.23e-09 | 1 |
sinusoid | 6.23e-09 | 1 |
digestive system duct | 6.23e-09 | 1 |
abdominal segment blood vessel | 6.23e-09 | 1 |
trunk blood vessel | 6.23e-09 | 1 |
liver parenchyma | 6.23e-09 | 1 |
liver lobule | 6.23e-09 | 1 |
biliary system | 6.23e-09 | 1 |
biliary tree | 6.23e-09 | 1 |
biliary bud | 6.23e-09 | 1 |
hepatic duct | 6.23e-09 | 1 |