FFCP PHASE1:Mm9::chr9:76893526..76893529,-: Difference between revisions
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{{FFCP|EntrezGene=26944|HGNC=|MCL_coexpression_id=11|UniProt=Q9WUR0,Q91XG7|association_with_transcript=58bp_to_ENSMUST00000034911,NM_012033,uc009qtd.2,uc009qte.2_5end|description=CAGE_peak_4_at_Tinag_5end|id=chr9:76893526..76893529,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.72e-14!14;UBERON:0000117!2.72e-14!14;UBERON:0000171!2.72e-14!14;UBERON:0000170!2.72e-14!14;UBERON:0005597!2.72e-14!14;UBERON:0000118!2.72e-14!14;UBERON:0000160!1.91e-12!43;UBERON:0005153!4.23e-11!17;UBERON:0005178!4.23e-11!17;UBERON:0005181!4.23e-11!17;UBERON:0002224!4.23e-11!17;UBERON:0000915!4.23e-11!17;UBERON:0008947!4.23e-11!17;UBERON:0003258!4.23e-11!17;UBERON:0002113!1.48e-10!14;UBERON:0003918!1.48e-10!14;UBERON:0005095!1.48e-10!14;UBERON:0007687!1.48e-10!14;UBERON:0005409!1.63e-10!59;UBERON:0001242!4.37e-10!13;UBERON:0000060!4.37e-10!13;UBERON:0001262!4.37e-10!13;UBERON:0004786!4.37e-10!13;UBERON:0000344!7.82e-10!15;UBERON:0001008!1.22e-09!17;UBERON:0006554!7.46e-09!16;UBERON:0001007!7.74e-09!128;UBERON:0001555!7.74e-09!128;UBERON:0007026!7.74e-09!128;UBERON:0004921!1.43e-08!126;UBERON:0004185!1.43e-08!126;UBERON:0004119!1.60e-08!130;UBERON:0000925!1.60e-08!130;UBERON:0006595!1.60e-08!130;UBERON:0009569!2.59e-07!66;UBERON:0004923!3.09e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.32e-11,14;UBERON:0003918,1.32e-11,14;UBERON:0011143,1.32e-11,14;UBERON:0005095,1.32e-11,14;UBERON:0007687,1.32e-11,14;UBERON:0002048,3.44e-11,14;UBERON:0000117,3.44e-11,14;UBERON:0000171,3.44e-11,14;UBERON:0000170,3.44e-11,14;UBERON:0005597,3.44e-11,14;UBERON:0000118,3.44e-11,14;UBERON:0000310,4.75e-10,6;UBERON:0001443,4.75e-10,6;UBERON:0000331,2.90e-09,3;UBERON:0002116,2.90e-09,3;UBERON:0001204,2.90e-09,3;UBERON:0001168,2.90e-09,3;UBERON:0005153,3.32e-09,17;UBERON:0005178,3.32e-09,17;UBERON:0005181,3.32e-09,17;UBERON:0002224,3.32e-09,17;UBERON:0000915,3.32e-09,17;UBERON:0008947,3.32e-09,17;UBERON:0003258,3.32e-09,17;UBERON:0006554,5.20e-09,18;UBERON:0009569,1.38e-08,66;UBERON:0001008,1.57e-08,19;UBERON:0005157,8.20e-08,20;UBERON:0000489,1.05e-07,21;UBERON:0002108,3.67e-07,4;UBERON:0005177,5.63e-07,79|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0.57423196411502,0,1.07735616342945,1.52018735565099,1.26015064879965,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.397912944082302,0.58489226135736,0,1.29682829924817,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.911765658574141,4.42655759869801,4.28069429140846,4.39596437955849,2.34454611451421,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,1.01847051465113,1.87752198630802,3.01511263395268,1.42826184531608,0.780534591431195,1.26108115284953,0.44292937929755,0.956728611944923,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Tinag}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26944 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUR0,Q91XG7 | |||
|association_with_transcript=58bp_to_ENSMUST00000034911,NM_012033,uc009qtd.2,uc009qte.2_5end | |||
|cluster_id=chr9:76893526..76893529,- | |||
|description=CAGE_peak_4_at_Tinag_5end | |||
|id=chr9:76893526..76893529,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.72e-14!14;UBERON:0000117!2.72e-14!14;UBERON:0000171!2.72e-14!14;UBERON:0000170!2.72e-14!14;UBERON:0005597!2.72e-14!14;UBERON:0000118!2.72e-14!14;UBERON:0000160!1.91e-12!43;UBERON:0005153!4.23e-11!17;UBERON:0005178!4.23e-11!17;UBERON:0005181!4.23e-11!17;UBERON:0002224!4.23e-11!17;UBERON:0000915!4.23e-11!17;UBERON:0008947!4.23e-11!17;UBERON:0003258!4.23e-11!17;UBERON:0002113!1.48e-10!14;UBERON:0003918!1.48e-10!14;UBERON:0005095!1.48e-10!14;UBERON:0007687!1.48e-10!14;UBERON:0005409!1.63e-10!59;UBERON:0001242!4.37e-10!13;UBERON:0000060!4.37e-10!13;UBERON:0001262!4.37e-10!13;UBERON:0004786!4.37e-10!13;UBERON:0000344!7.82e-10!15;UBERON:0001008!1.22e-09!17;UBERON:0006554!7.46e-09!16;UBERON:0001007!7.74e-09!128;UBERON:0001555!7.74e-09!128;UBERON:0007026!7.74e-09!128;UBERON:0004921!1.43e-08!126;UBERON:0004185!1.43e-08!126;UBERON:0004119!1.60e-08!130;UBERON:0000925!1.60e-08!130;UBERON:0006595!1.60e-08!130;UBERON:0009569!2.59e-07!66;UBERON:0004923!3.09e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.32e-11,14;UBERON:0003918,1.32e-11,14;UBERON:0011143,1.32e-11,14;UBERON:0005095,1.32e-11,14;UBERON:0007687,1.32e-11,14;UBERON:0002048,3.44e-11,14;UBERON:0000117,3.44e-11,14;UBERON:0000171,3.44e-11,14;UBERON:0000170,3.44e-11,14;UBERON:0005597,3.44e-11,14;UBERON:0000118,3.44e-11,14;UBERON:0000310,4.75e-10,6;UBERON:0001443,4.75e-10,6;UBERON:0000331,2.90e-09,3;UBERON:0002116,2.90e-09,3;UBERON:0001204,2.90e-09,3;UBERON:0001168,2.90e-09,3;UBERON:0005153,3.32e-09,17;UBERON:0005178,3.32e-09,17;UBERON:0005181,3.32e-09,17;UBERON:0002224,3.32e-09,17;UBERON:0000915,3.32e-09,17;UBERON:0008947,3.32e-09,17;UBERON:0003258,3.32e-09,17;UBERON:0006554,5.20e-09,18;UBERON:0009569,1.38e-08,66;UBERON:0001008,1.57e-08,19;UBERON:0005157,8.20e-08,20;UBERON:0000489,1.05e-07,21;UBERON:0002108,3.67e-07,4;UBERON:0005177,5.63e-07,79 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0.57423196411502,0,1.07735616342945,1.52018735565099,1.26015064879965,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.397912944082302,0.58489226135736,0,1.29682829924817,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.911765658574141,4.42655759869801,4.28069429140846,4.39596437955849,2.34454611451421,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,1.01847051465113,1.87752198630802,3.01511263395268,1.42826184531608,0.780534591431195,1.26108115284953,0.44292937929755,0.956728611944923,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Tinag | |||
}} |
Latest revision as of 03:44, 27 September 2015
Short description: | p4@Tinag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tinag_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 58bp_to_ENSMUST00000034911, NM_012033, uc009qtd.2, uc009qte.2_5end |
EntrezGene: | Tinag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.32e-11 | 14 |
kidney mesenchyme | 1.32e-11 | 14 |
upper urinary tract | 1.32e-11 | 14 |
kidney rudiment | 1.32e-11 | 14 |
kidney field | 1.32e-11 | 14 |
lung | 3.44e-11 | 14 |
respiratory tube | 3.44e-11 | 14 |
respiration organ | 3.44e-11 | 14 |
pair of lungs | 3.44e-11 | 14 |
lung primordium | 3.44e-11 | 14 |
lung bud | 3.44e-11 | 14 |
breast | 4.75e-10 | 6 |
chest | 4.75e-10 | 6 |
ileal mucosa | 2.90e-09 | 3 |
ileum | 2.90e-09 | 3 |
mucosa of small intestine | 2.90e-09 | 3 |
wall of small intestine | 2.90e-09 | 3 |
epithelial bud | 3.32e-09 | 17 |
thoracic cavity element | 3.32e-09 | 17 |
thoracic segment organ | 3.32e-09 | 17 |
thoracic cavity | 3.32e-09 | 17 |
thoracic segment of trunk | 3.32e-09 | 17 |
respiratory primordium | 3.32e-09 | 17 |
endoderm of foregut | 3.32e-09 | 17 |
urinary system structure | 5.20e-09 | 18 |
subdivision of trunk | 1.38e-08 | 66 |
renal system | 1.57e-08 | 19 |
epithelial fold | 8.20e-08 | 20 |
cavitated compound organ | 1.05e-07 | 21 |
small intestine | 3.67e-07 | 4 |
trunk region element | 5.63e-07 | 79 |