FFCP PHASE1:Mm9::chr18:3337339..3337397,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3337339..3337397,-
|short_description=p5@Crem
|description=CAGE_peak_5_at_Crem_5end
|association_with_transcript=88bp_to_ENSMUST00000154135_5end
|EntrezG...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12916 | |EntrezGene=12916 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=363 | |||
|TSSclassifier=NA | |||
|UniProt=P27699 | |UniProt=P27699 | ||
|association_with_transcript=88bp_to_ENSMUST00000154135_5end | |||
|cluster_id=chr18:3337339..3337397,- | |||
|description=CAGE_peak_5_at_Crem_5end | |||
|id=chr18:3337339..3337397,- | |||
|ontology_enrichment_celltype=CL:0000063!9.70e-16!66;CL:0000144!4.14e-15!121;CL:0000012!4.14e-15!121;CL:0002371!1.25e-13!118;CL:0000723!2.37e-12!91;CL:0000048!2.37e-12!91;CL:0000219!3.58e-12!54;CL:0000548!3.96e-12!115;CL:0000004!3.96e-12!115;CL:0000255!3.96e-12!115;CL:0002320!4.05e-12!46;CL:0000134!4.05e-12!46;CL:0000034!6.22e-12!97;CL:0000988!3.07e-09!32;CL:0002032!3.07e-09!32;CL:0000037!3.07e-09!32;CL:0000566!3.07e-09!32;CL:0000837!3.07e-09!32;CL:0002031!2.15e-08!25;CL:0000838!8.46e-08!12;CL:0000084!3.51e-07!11;CL:0000827!3.51e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.53e-14,46;CL:0000134,2.53e-14,46;CL:0000219,6.24e-14,54;CL:0000034,1.09e-13,97;CL:0000723,2.53e-13,91;CL:0000048,2.53e-13,91;CL:0000988,7.10e-11,32;CL:0002032,7.10e-11,32;CL:0000037,7.10e-11,32;CL:0000837,7.10e-11,32;CL:0002031,6.10e-10,25;CL:0000838,6.63e-09,12;CL:0000084,3.53e-08,11;CL:0000827,3.53e-08,11;CL:0000542,8.94e-08,13;CL:0000051,8.94e-08,13;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000738,2.15e-07,17;CL:0002087,2.15e-07,17;CL:0000624,6.22e-07,8;CL:0000066,7.63e-07,25;CL:0000223,7.95e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.05e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-14,46 | |||
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| ||
|short_description=p5@Crem | |||
}} | }} |
Latest revision as of 03:53, 27 September 2015
Short description: | p5@Crem |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Crem_5end |
Coexpression cluster: | MCL_coexpression_mm9:363 |
Association with transcript: | 88bp_to_ENSMUST00000154135_5end |
EntrezGene: | Crem |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.53e-14 | 46 |
mesenchymal cell | 2.53e-14 | 46 |
motile cell | 6.24e-14 | 54 |
stem cell | 1.09e-13 | 97 |
somatic stem cell | 2.53e-13 | 91 |
multi fate stem cell | 2.53e-13 | 91 |
hematopoietic cell | 7.10e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.10e-11 | 32 |
hematopoietic stem cell | 7.10e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.10e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 6.10e-10 | 25 |
lymphoid lineage restricted progenitor cell | 6.63e-09 | 12 |
T cell | 3.53e-08 | 11 |
pro-T cell | 3.53e-08 | 11 |
lymphocyte | 8.94e-08 | 13 |
common lymphoid progenitor | 8.94e-08 | 13 |
mature alpha-beta T cell | 1.23e-07 | 9 |
alpha-beta T cell | 1.23e-07 | 9 |
immature T cell | 1.23e-07 | 9 |
mature T cell | 1.23e-07 | 9 |
immature alpha-beta T cell | 1.23e-07 | 9 |
leukocyte | 2.15e-07 | 17 |
nongranular leukocyte | 2.15e-07 | 17 |
CD4-positive, alpha-beta T cell | 6.22e-07 | 8 |
epithelial cell | 7.63e-07 | 25 |
endodermal cell | 7.95e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.53e-14 | 46 |