FFCP PHASE1:Mm9::chr18:34811357..34811395,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:34811357..34811395,-
|short_description=p1@Cdc23
|description=CAGE_peak_1_at_Cdc23_5end
|association_with_transcript=0bp_to_ENSMUST00000025228,ENSMUST0000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52563 | |EntrezGene=52563 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8W7,F6R0E6,Q8BGZ4 | |UniProt=G3X8W7,F6R0E6,Q8BGZ4 | ||
|association_with_transcript=0bp_to_ENSMUST00000025228,ENSMUST00000055365,ENSMUST00000133162,ENSMUST00000133181,ENSMUST00000135208,ENSMUST00000151409,NM_178347,uc008elb.1,uc008elc.1,uc008eld.1,uc012bbc.1_5end | |||
|cluster_id=chr18:34811357..34811395,- | |||
|description=CAGE_peak_1_at_Cdc23_5end | |||
|id=chr18:34811357..34811395,- | |||
|ontology_enrichment_celltype=CL:0000540!2.81e-11!33;CL:0000047!2.81e-11!33;CL:0000031!2.81e-11!33;CL:0000404!2.81e-11!33;CL:0000393!2.14e-10!39;CL:0000211!2.14e-10!39;CL:0000117!6.66e-10!23;CL:0000337!6.66e-10!23;CL:0000221!1.83e-09!44;CL:0000133!1.83e-09!44;CL:0002319!6.25e-09!43;CL:0000055!8.31e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.81e-11,33;CL:0000047,2.81e-11,33;CL:0000031,2.81e-11,33;CL:0000404,2.81e-11,33;CL:0000393,2.14e-10,39;CL:0000211,2.14e-10,39;CL:0000117,6.66e-10,23;CL:0000337,6.66e-10,23;CL:0000221,1.83e-09,44;CL:0000133,1.83e-09,44;CL:0002319,6.25e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.64e-07!75;UBERON:0001016!4.64e-07!75;UBERON:0001017!6.10e-07!73;UBERON:0005743!6.10e-07!73;UBERON:0004121!9.41e-07!102;UBERON:0000924!9.41e-07!102;UBERON:0006601!9.41e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.03e-09,92;UBERON:0001016,4.64e-07,75;UBERON:0001017,6.10e-07,73 | |||
|phase1_expression=36.513937139893,2.09385244583617,3.63999391511629,4.83942738090928,1.00179145989269,5.70789524500425,3.03696432774183,9.8133725815598,3.09735188733667,3.5109678948299,10.4442960617558,8.05698805852898,6.84802919724823,9.61624426608971,9.66018309265422,11.5410902412201,12.5921138063066,10.567982539501,7.54129384831563,5.94145512517242,10.2902381082794,14.9929336313337,11.4927907221132,5.11975752938901,5.73523202667925,3.44539178469012,3.4460959692726,3.878482188346,3.99049180858385,5.79669298447841,5.76499327703792,19.0509202037889,16.6067492647834,15.8481681015439,11.554064790051,15.2935873729813,11.0251452381679,11.7188856606334,13.2827008569046,14.6586648312664,7.64700934440319,4.78131839470912,8.25367600152961,12.7155786155333,10.644577778049,15.0508336772579,13.3006528539167,11.5553332881637,12.5221124158649,14.7766723296455,12.0388322597812,14.3752564364972,5.20126078778983,5.07753499407941,3.6970317905671,14.663787854049,12.8940047972441,13.9231464914909,24.4802917640113,21.6886301501533,19.6487735086916,10.5041804941431,15.1180115338894,4.94944844504769,4.94433181283487,4.9733608046227,5.09320187881288,9.22123932771731,32.8696071017874,27.6762173579966,27.7628948983824,16.8534080798244,13.693849539,28.9078286147292,32.5874601462004,30.3342199581307,11.0115880999389,15.7055425844781,16.7431121249305,20.44237459818,27.1718301499157,30.7338888628488,14.5175159480718,17.4456409109821,18.7941844765476,20.3293723976831,23.9184423742493,26.0959224155421,15.0695124733036,13.6784523793282,7.24661221754194,3.44169550792555,2.03991400112325,5.39703191637817,5.84798775702902,1.79210754838934,8.00533194750986,12.4414135481982,9.61208217030615,10.2468476607999,27.6053102762294,21.815501160434,10.1922095882658,21.3320010945999,10.8245520505607,9.12095515710355,8.59391556525132,8.33542321949138,11.9111426477699,8.46120192669501,19.2568712710411,10.0473607843007,14.7593918243877,14.9215414147096,11.6412820064348,16.5879900555172,6.67426412882809,5.49477556295664,6.19227386364912,19.0884882937943,16.7839554029899,13.091631834651,3.72783522436244,8.78342391034641,17.1746299587033,4.34276993854605,13.2994788201571,10.7982491578813,15.5025677029139,10.4853447583376,7.77751024791665,27.6439574648302,12.8629996942285,17.1329356411321,12.259494629014,14.2772311499627,22.5064994109199,10.4501855312478,5.55990068554084,7.15502310014011,21.8602344177342,16.3230494147766,16.5657159420921,17.9338733224501,20.6830957420037,21.9074461687093,22.0199052715363,9.05461797586555,25.4370231660754,21.1798809787958,21.8179393963297,23.8923348346057,14.1804097105055,16.0195996600197,10.906453229621,22.0928036168527,2.80885274925294,9.26452465612975,12.5031939734061,14.4988040774851,16.8858763186389,24.128316235776,19.4130683179872,16.9217239302767,21.2888615784582,19.9979192485351,18.2425912951741,20.667465598989,20.2408615393581,16.0884114797513,13.9438352418872,13.5965988305559,4.83010253640311,11.541752013392,12.4071069652835,24.3883931338904,2.31293148088659,4.49565963328025,22.6085545567348,20.4368271237186,14.5620231293965,11.4959609035305,5.78182913996663,10.0819581839656,9.01605216934572,8.23494773620054,9.0480675168097,9.15199771389294,7.60359939764569,5.39291645192533,6.91641759599022,6.96994456390285,20.2944654019797,22.735454009336,19.1603150644237,13.8482902934814,12.9948166402309,16.2013743946636,15.1135323726975,8.85660887877613,12.55989822731,8.88459580236964,2.07516838961004,13.6812986687197,15.9212786041694,10.5685192820881,12.7801876474757,13.5059209461353,7.38414970166117,7.19240343627027,11.1873306474774,9.88421087477093,7.18841032636773,5.58211421502755,11.8574315783533,6.06189307073068,6.63770430031075,4.3419916922703,7.02062122633098,19.3281240005894,19.066902243717,18.3324692637203,19.4792906079457,14.2380318825543,11.4260947625287,19.9036320814955,14.817703545982,12.8449519996289,21.5263937687608,7.70157579163969,14.5055384767352,11.2826265693579,10.5553898757491,5.4390568381871,7.37646409528554,8.27810238914197,9.63303539926752,13.7137673312878,10.1639666133539,7.82659874333556,17.6684602873104,16.7888660047555,14.6487910458303,16.4888470587261,15.1503098376028,17.8338214396964,18.2164815753702,13.151513606009,13.8350722281283,14.1381379225595,12.7746076687442,20.8336756290689,22.4784003907935,13.3625799607754,2.65490276679926,15.7807413500738,17.8370898609203,10.3732793865744,10.9261700365886,10.7602301780375,12.6629863652428,13.4507479906677,15.329387270543,9.48110273807448,5.27093042874994,7.21948802737308,11.5749465956288,21.0671480016633,20.8267480890235,21.005029433096,19.3300854670078,16.7666688545946,19.087686389846,18.267896946876,10.3255551548033,8.04961869282517,8.38007912608855,8.73897140589844,13.2400829890643,18.1541904033749,13.2503301843481,12.4747083806247,7.28702091574627,9.27126510052548,6.66396435111626,21.2578474002119,13.8895895527284,11.4904758772862,10.3887613067979,12.5827995263587,14.2781881194838,12.0358248998346,11.746997773376,5.72802370809068,20.0873355924021,21.34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| |phase1_expression=36.513937139893,2.09385244583617,3.63999391511629,4.83942738090928,1.00179145989269,5.70789524500425,3.03696432774183,9.8133725815598,3.09735188733667,3.5109678948299,10.4442960617558,8.05698805852898,6.84802919724823,9.61624426608971,9.66018309265422,11.5410902412201,12.5921138063066,10.567982539501,7.54129384831563,5.94145512517242,10.2902381082794,14.9929336313337,11.4927907221132,5.11975752938901,5.73523202667925,3.44539178469012,3.4460959692726,3.878482188346,3.99049180858385,5.79669298447841,5.76499327703792,19.0509202037889,16.6067492647834,15.8481681015439,11.554064790051,15.2935873729813,11.0251452381679,11.7188856606334,13.2827008569046,14.6586648312664,7.64700934440319,4.78131839470912,8.25367600152961,12.7155786155333,10.644577778049,15.0508336772579,13.3006528539167,11.5553332881637,12.5221124158649,14.7766723296455,12.0388322597812,14.3752564364972,5.20126078778983,5.07753499407941,3.6970317905671,14.663787854049,12.8940047972441,13.9231464914909,24.4802917640113,21.6886301501533,19.6487735086916,10.5041804941431,15.1180115338894,4.94944844504769,4.94433181283487,4.9733608046227,5.09320187881288,9.22123932771731,32.8696071017874,27.6762173579966,27.7628948983824,16.8534080798244,13.693849539,28.9078286147292,32.5874601462004,30.3342199581307,11.0115880999389,15.7055425844781,16.7431121249305,20.44237459818,27.1718301499157,30.7338888628488,14.5175159480718,17.4456409109821,18.7941844765476,20.3293723976831,23.9184423742493,26.0959224155421,15.0695124733036,13.6784523793282,7.24661221754194,3.44169550792555,2.03991400112325,5.39703191637817,5.84798775702902,1.79210754838934,8.00533194750986,12.4414135481982,9.61208217030615,10.2468476607999,27.6053102762294,21.815501160434,10.1922095882658,21.3320010945999,10.8245520505607,9.12095515710355,8.59391556525132,8.33542321949138,11.9111426477699,8.46120192669501,19.2568712710411,10.0473607843007,14.7593918243877,14.9215414147096,11.6412820064348,16.5879900555172,6.67426412882809,5.49477556295664,6.19227386364912,19.0884882937943,16.7839554029899,13.091631834651,3.72783522436244,8.78342391034641,17.1746299587033,4.34276993854605,13.2994788201571,10.7982491578813,15.5025677029139,10.4853447583376,7.77751024791665,27.6439574648302,12.8629996942285,17.1329356411321,12.259494629014,14.2772311499627,22.5064994109199,10.4501855312478,5.55990068554084,7.15502310014011,21.8602344177342,16.3230494147766,16.5657159420921,17.9338733224501,20.6830957420037,21.9074461687093,22.0199052715363,9.05461797586555,25.4370231660754,21.1798809787958,21.8179393963297,23.8923348346057,14.1804097105055,16.0195996600197,10.906453229621,22.0928036168527,2.80885274925294,9.26452465612975,12.5031939734061,14.4988040774851,16.8858763186389,24.128316235776,19.4130683179872,16.9217239302767,21.2888615784582,19.9979192485351,18.2425912951741,20.667465598989,20.2408615393581,16.0884114797513,13.9438352418872,13.5965988305559,4.83010253640311,11.541752013392,12.4071069652835,24.3883931338904,2.31293148088659,4.49565963328025,22.6085545567348,20.4368271237186,14.5620231293965,11.4959609035305,5.78182913996663,10.0819581839656,9.01605216934572,8.23494773620054,9.0480675168097,9.15199771389294,7.60359939764569,5.39291645192533,6.91641759599022,6.96994456390285,20.2944654019797,22.735454009336,19.1603150644237,13.8482902934814,12.9948166402309,16.2013743946636,15.1135323726975,8.85660887877613,12.55989822731,8.88459580236964,2.07516838961004,13.6812986687197,15.9212786041694,10.5685192820881,12.7801876474757,13.5059209461353,7.38414970166117,7.19240343627027,11.1873306474774,9.88421087477093,7.18841032636773,5.58211421502755,11.8574315783533,6.06189307073068,6.63770430031075,4.3419916922703,7.02062122633098,19.3281240005894,19.066902243717,18.3324692637203,19.4792906079457,14.2380318825543,11.4260947625287,19.9036320814955,14.817703545982,12.8449519996289,21.5263937687608,7.70157579163969,14.5055384767352,11.2826265693579,10.5553898757491,5.4390568381871,7.37646409528554,8.27810238914197,9.63303539926752,13.7137673312878,10.1639666133539,7.82659874333556,17.6684602873104,16.7888660047555,14.6487910458303,16.4888470587261,15.1503098376028,17.8338214396964,18.2164815753702,13.151513606009,13.8350722281283,14.1381379225595,12.7746076687442,20.8336756290689,22.4784003907935,13.3625799607754,2.65490276679926,15.7807413500738,17.8370898609203,10.3732793865744,10.9261700365886,10.7602301780375,12.6629863652428,13.4507479906677,15.329387270543,9.48110273807448,5.27093042874994,7.21948802737308,11.5749465956288,21.0671480016633,20.8267480890235,21.005029433096,19.3300854670078,16.7666688545946,19.087686389846,18.267896946876,10.3255551548033,8.04961869282517,8.38007912608855,8.73897140589844,13.2400829890643,18.1541904033749,13.2503301843481,12.4747083806247,7.28702091574627,9.27126510052548,6.66396435111626,21.2578474002119,13.8895895527284,11.4904758772862,10.3887613067979,12.5827995263587,14.2781881194838,12.0358248998346,11.746997773376,5.72802370809068,20.0873355924021,21.34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| ||
|short_description=p1@Cdc23 | |||
}} | }} |
Latest revision as of 04:17, 27 September 2015
Short description: | p1@Cdc23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdc23_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000025228, ENSMUST00000055365, ENSMUST00000133162, ENSMUST00000133181, ENSMUST00000135208, ENSMUST00000151409, NM_178347, uc008elb.1, uc008elc.1, uc008eld.1, uc012bbc.1_5end |
EntrezGene: | Cdc23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.81e-11 | 33 |
neuronal stem cell | 2.81e-11 | 33 |
neuroblast | 2.81e-11 | 33 |
electrically signaling cell | 2.81e-11 | 33 |
electrically responsive cell | 2.14e-10 | 39 |
electrically active cell | 2.14e-10 | 39 |
CNS neuron (sensu Vertebrata) | 6.66e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.66e-10 | 23 |
ectodermal cell | 1.83e-09 | 44 |
neurectodermal cell | 1.83e-09 | 44 |
neural cell | 6.25e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.03e-09 | 92 |
nervous system | 4.64e-07 | 75 |
central nervous system | 6.10e-07 | 73 |