FFCP PHASE1:Mm9::chr18:35809223..35809243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69816 | |EntrezGene=69816 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D8I1 | |UniProt=Q9D8I1 | ||
|association_with_transcript=-202bp_to_ENSMUST00000025211,NM_027222,uc008emm.2_5end | |association_with_transcript=-202bp_to_ENSMUST00000025211,NM_027222,uc008emm.2_5end | ||
|cluster_id=chr18:35809223..35809243,- | |||
|description=CAGE_peak_2_at_2010001M09Rik_5end | |description=CAGE_peak_2_at_2010001M09Rik_5end | ||
|id=chr18:35809223..35809243,- | |id=chr18:35809223..35809243,- | ||
|ontology_enrichment_celltype=CL:0000553!2.38e-12!6;CL:0000556!2.38e-12!6;CL:0000050!6.95e-08!9 | |ontology_enrichment_celltype=CL:0000553!2.38e-12!6;CL:0000556!2.38e-12!6;CL:0000050!6.95e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.93e-29,6;CL:0000556,9.93e-29,6;CL:0000050,3.43e-19,9;CL:0000839,2.68e-13,13;CL:0000763,8.39e-11,16;CL:0002031,1.02e-09,25;CL:0002027,1.03e-09,3;CL:0002006,1.03e-09,3;CL:0002024,1.03e-09,3;CL:0000049,4.33e-09,19;CL:0000945,2.54e-08,1;CL:0000236,2.54e-08,1;CL:0000826,2.54e-08,1;CL:0000988,1.61e-07,32;CL:0002032,1.61e-07,32;CL:0000037,1.61e-07,32;CL:0000837,1.61e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.98e-15!48;UBERON:0002405!1.14e-13!70;UBERON:0002390!1.91e-11!45;UBERON:0003061!1.91e-11!45;UBERON:0002106!1.98e-11!6;UBERON:0004457!1.98e-11!6;UBERON:0000042!1.98e-11!6;UBERON:0004854!1.98e-11!6;UBERON:0009034!1.98e-11!6;UBERON:0002095!1.98e-11!6;UBERON:0004782!1.98e-11!6;UBERON:0003281!1.98e-11!6;UBERON:0009664!1.98e-11!6;UBERON:0002296!1.98e-11!6;UBERON:0005602!1.98e-11!6;UBERON:0001179!1.98e-11!6;UBERON:0006293!1.98e-11!6;UBERON:0003887!9.86e-09!10;UBERON:0004177!1.29e-08!29;UBERON:0005057!1.24e-07!51;UBERON:0002465!6.61e-07!3;UBERON:0003081!7.36e-07!88 | |ontology_enrichment_uberon=UBERON:0002193!5.98e-15!48;UBERON:0002405!1.14e-13!70;UBERON:0002390!1.91e-11!45;UBERON:0003061!1.91e-11!45;UBERON:0002106!1.98e-11!6;UBERON:0004457!1.98e-11!6;UBERON:0000042!1.98e-11!6;UBERON:0004854!1.98e-11!6;UBERON:0009034!1.98e-11!6;UBERON:0002095!1.98e-11!6;UBERON:0004782!1.98e-11!6;UBERON:0003281!1.98e-11!6;UBERON:0009664!1.98e-11!6;UBERON:0002296!1.98e-11!6;UBERON:0005602!1.98e-11!6;UBERON:0001179!1.98e-11!6;UBERON:0006293!1.98e-11!6;UBERON:0003887!9.86e-09!10;UBERON:0004177!1.29e-08!29;UBERON:0005057!1.24e-07!51;UBERON:0002465!6.61e-07!3;UBERON:0003081!7.36e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,9.96e-21,3;UBERON:0002193,3.86e-16,48;UBERON:0002405,3.86e-16,48;UBERON:0001962,3.65e-14,2;UBERON:0001961,3.65e-14,2;UBERON:0001744,3.65e-14,2;UBERON:0002371,8.39e-11,16;UBERON:0002106,8.77e-11,6;UBERON:0004457,8.77e-11,6;UBERON:0000042,8.77e-11,6;UBERON:0004854,8.77e-11,6;UBERON:0009034,8.77e-11,6;UBERON:0002095,8.77e-11,6;UBERON:0004782,8.77e-11,6;UBERON:0003281,8.77e-11,6;UBERON:0009664,8.77e-11,6;UBERON:0002296,8.77e-11,6;UBERON:0005602,8.77e-11,6;UBERON:0001179,8.77e-11,6;UBERON:0006293,8.77e-11,6;UBERON:0002390,4.45e-09,45;UBERON:0003061,4.45e-09,45;UBERON:0000029,2.98e-08,1;UBERON:0001097,2.98e-08,1;UBERON:0003968,2.98e-08,1;UBERON:0001467,2.98e-08,1;UBERON:0001474,7.70e-08,22;UBERON:0004765,7.70e-08,22;UBERON:0001434,7.70e-08,22;UBERON:0003199,8.96e-08,1;UBERON:0004923,5.59e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.63217847606774,0.699561878128147,23.1864691538305,19.6073640056206,20.3707032863054,0,0,0,3.19984845586813,2.2940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9058693937529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0.206386867963223,0.370389054739423,0.753473828018764,2.7338845544205,3.43167259809784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.63217847606774,0.699561878128147,23.1864691538305,19.6073640056206,20.3707032863054,0,0,0,3.19984845586813,2.2940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9058693937529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0.206386867963223,0.370389054739423,0.753473828018764,2.7338845544205,3.43167259809784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p2@2010001M09Rik | |short_description=p2@2010001M09Rik | ||
}} | }} |
Latest revision as of 04:53, 27 September 2015
Short description: | p2@2010001M09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2010001M09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -202bp_to_ENSMUST00000025211, NM_027222, uc008emm.2_5end |
EntrezGene: | 2010001M09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.93e-29 | 6 |
megakaryocyte | 9.93e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 3.43e-19 | 9 |
myeloid lineage restricted progenitor cell | 2.68e-13 | 13 |
myeloid cell | 8.39e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 1.02e-09 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.03e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.03e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.03e-09 | 3 |
common myeloid progenitor | 4.33e-09 | 19 |
lymphocyte of B lineage | 2.54e-08 | 1 |
B cell | 2.54e-08 | 1 |
pro-B cell | 2.54e-08 | 1 |
hematopoietic cell | 1.61e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.61e-07 | 32 |
hematopoietic stem cell | 1.61e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.61e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 9.96e-21 | 3 |
hemolymphoid system | 3.86e-16 | 48 |
immune system | 3.86e-16 | 48 |
gut-associated lymphoid tissue | 3.65e-14 | 2 |
mucosa-associated lymphoid tissue | 3.65e-14 | 2 |
lymphoid tissue | 3.65e-14 | 2 |
bone marrow | 8.39e-11 | 16 |
spleen | 8.77e-11 | 6 |
cavity lining | 8.77e-11 | 6 |
serous membrane | 8.77e-11 | 6 |
gastrointestinal system mesentery | 8.77e-11 | 6 |
stomach region | 8.77e-11 | 6 |
mesentery | 8.77e-11 | 6 |
gastrointestinal system serosa | 8.77e-11 | 6 |
mesentery of stomach | 8.77e-11 | 6 |
gut mesentery | 8.77e-11 | 6 |
dorsal mesentery | 8.77e-11 | 6 |
dorsal mesogastrium | 8.77e-11 | 6 |
peritoneal cavity | 8.77e-11 | 6 |
spleen primordium | 8.77e-11 | 6 |
hematopoietic system | 4.45e-09 | 45 |
blood island | 4.45e-09 | 45 |
lymph node | 2.98e-08 | 1 |
axillary lymph node | 2.98e-08 | 1 |
peripheral lymph node | 2.98e-08 | 1 |
shoulder | 2.98e-08 | 1 |
bone element | 7.70e-08 | 22 |
skeletal element | 7.70e-08 | 22 |
skeletal system | 7.70e-08 | 22 |
egg chamber | 8.96e-08 | 1 |
organ component layer | 5.59e-07 | 24 |