Personal tools

FFCP PHASE1:Mm9::chr11:21138567..21138582,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=245944|HGNC=|UniProt=E9PUS8,Q5SPW0,Q8BRE9,Q91ZJ4|association_with_transcript=-309bp_to_ENSMUST00000094375,NM_139061,uc007ido.2,uc007idp.2_5end|description=CAGE_peak_7_at_Vps54_5end|id=chr11:21138567..21138582,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.03e-09!14;UBERON:0000117!4.03e-09!14;UBERON:0000171!4.03e-09!14;UBERON:0000170!4.03e-09!14;UBERON:0005597!4.03e-09!14;UBERON:0000118!4.03e-09!14;UBERON:0005178!2.28e-07!17;UBERON:0005181!2.28e-07!17;UBERON:0002224!2.28e-07!17;UBERON:0000915!2.28e-07!17;UBERON:0008947!2.28e-07!17;UBERON:0003258!2.28e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.84e-15,14;UBERON:0000117,1.84e-15,14;UBERON:0000171,1.84e-15,14;UBERON:0000170,1.84e-15,14;UBERON:0005597,1.84e-15,14;UBERON:0000118,1.84e-15,14;UBERON:0005153,1.95e-12,17;UBERON:0005178,1.95e-12,17;UBERON:0005181,1.95e-12,17;UBERON:0002224,1.95e-12,17;UBERON:0000915,1.95e-12,17;UBERON:0008947,1.95e-12,17;UBERON:0003258,1.95e-12,17;UBERON:0005157,2.56e-10,20;UBERON:0000065,3.84e-09,41;UBERON:0001004,7.36e-09,42;UBERON:0005911,3.87e-07,69|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0.90739263392049,0,0.16787927191189,0.233612640595526,0.516493293766305,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.794327609607082,0,0.159992422793407,0.45881856213434,0,0,0.646413698057667,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0.263772575460388,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.376999773989026,0.494389935468748,0,0,0.323533699894818,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0,0.239630249011841,0,0.254140454146129,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.712875546952214,0.746441823660558,0.252722758433675,0,0.520481771850815,1.37941262660084,0.540186389416048,0.150704817835715,0.680364991513279,0.2562274405697,0.655912071918102,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,1.24275463521301,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0.528901133327089,0.639864751605702,0.464473343720877,0.644337306610467,0.80673409849337,0.444756087689741,0.760902504450237,0,1.4822905925161,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,0.685491075658373,0,1.4255592949172,0.581857461502877,1.75339549725796,0.758838445491087,0.147610147979602,0.627994911365499,0.493588655687202,0,0.667380422864376,0.196558995113203,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.549122826376163,0,0,1.24815069245824,0,0.538192240565737,1.4473305640901,0.923765950833023,1.13694847062291,0.814824882210129,0.678980343100753,0.704070744865506,0.837531287209079,1.6663054862021,2.34160377429359,1.57635144106191,1.32878813789265,1.43509291791738,2.13022309130459,1.20879487306127,2.4590339958857,1.50791283939272,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0.709700426041343,0.35613120733451,0.488660878060728,0.164970122972535,0,0.242780636154981,1.209294227859,0.377210159511796,0,0,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0.164549020602121,0,0.469343416127421,0.21183207086382,0,0.49465875882444,0.645857706783622,0.301564624640779,0,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.979660166265606,0.414599921413271,0,0.949007980743406,0.406638934253697,0.756037385752609,0,0.436725127492355,0.134864346384821,0.743881101528023,0.523511883968059,0.518459893167171,0,0,1.19613236835183,0.330916980914195,0.583353565032143,0.645799117388655,0.168956125490778,0.234714477291508,1.0416350787516,0.943734099831398,0.483168241652012,0.576060012515731,0.632022241256357,0.608175645870493,0.102710957164827,0.389762468933385,1.25318686967237,1.58945083825012,0.841368146639782,0.443068581523732,0.403865799792591,0.990688486514998,0.705783295957884,1.07203668813728,0.962118416403295,1.40252282617883,0,0,0.0897138566094757,0,0,0,0.915758121336325,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.367687016900028,0.888986911206461,0.206035057238894,0,0.505394423527595,0,0.565879024158229,0.468207537349412,0.384150914429216,0.459483751644906,0.952587382566147,0.347652977834566,1.35036454324594,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0,0.543216455383447,0,0.593175090620871,0.788035859004508,0.409231043169689,0.619747364743864,0.192906610981141,0,0.935726433781634,0.644613162144895,0.382576664137687,0,0.463735671240843|short_description=p7@Vps54}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245944
|HGNC=
|TSSclassifier=NA
|UniProt=E9PUS8,Q5SPW0,Q8BRE9,Q91ZJ4
|association_with_transcript=-309bp_to_ENSMUST00000094375,NM_139061,uc007ido.2,uc007idp.2_5end
|cluster_id=chr11:21138567..21138582,+
|description=CAGE_peak_7_at_Vps54_5end
|id=chr11:21138567..21138582,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!4.03e-09!14;UBERON:0000117!4.03e-09!14;UBERON:0000171!4.03e-09!14;UBERON:0000170!4.03e-09!14;UBERON:0005597!4.03e-09!14;UBERON:0000118!4.03e-09!14;UBERON:0005178!2.28e-07!17;UBERON:0005181!2.28e-07!17;UBERON:0002224!2.28e-07!17;UBERON:0000915!2.28e-07!17;UBERON:0008947!2.28e-07!17;UBERON:0003258!2.28e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.84e-15,14;UBERON:0000117,1.84e-15,14;UBERON:0000171,1.84e-15,14;UBERON:0000170,1.84e-15,14;UBERON:0005597,1.84e-15,14;UBERON:0000118,1.84e-15,14;UBERON:0005153,1.95e-12,17;UBERON:0005178,1.95e-12,17;UBERON:0005181,1.95e-12,17;UBERON:0002224,1.95e-12,17;UBERON:0000915,1.95e-12,17;UBERON:0008947,1.95e-12,17;UBERON:0003258,1.95e-12,17;UBERON:0005157,2.56e-10,20;UBERON:0000065,3.84e-09,41;UBERON:0001004,7.36e-09,42;UBERON:0005911,3.87e-07,69
|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0.90739263392049,0,0.16787927191189,0.233612640595526,0.516493293766305,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.794327609607082,0,0.159992422793407,0.45881856213434,0,0,0.646413698057667,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0.263772575460388,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.376999773989026,0.494389935468748,0,0,0.323533699894818,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0,0.239630249011841,0,0.254140454146129,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.712875546952214,0.746441823660558,0.252722758433675,0,0.520481771850815,1.37941262660084,0.540186389416048,0.150704817835715,0.680364991513279,0.2562274405697,0.655912071918102,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,1.24275463521301,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0.528901133327089,0.639864751605702,0.464473343720877,0.644337306610467,0.80673409849337,0.444756087689741,0.760902504450237,0,1.4822905925161,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,0.685491075658373,0,1.4255592949172,0.581857461502877,1.75339549725796,0.758838445491087,0.147610147979602,0.627994911365499,0.493588655687202,0,0.667380422864376,0.196558995113203,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.549122826376163,0,0,1.24815069245824,0,0.538192240565737,1.4473305640901,0.923765950833023,1.13694847062291,0.814824882210129,0.678980343100753,0.704070744865506,0.837531287209079,1.6663054862021,2.34160377429359,1.57635144106191,1.32878813789265,1.43509291791738,2.13022309130459,1.20879487306127,2.4590339958857,1.50791283939272,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0.709700426041343,0.35613120733451,0.488660878060728,0.164970122972535,0,0.242780636154981,1.209294227859,0.377210159511796,0,0,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0.164549020602121,0,0.469343416127421,0.21183207086382,0,0.49465875882444,0.645857706783622,0.301564624640779,0,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.979660166265606,0.414599921413271,0,0.949007980743406,0.406638934253697,0.756037385752609,0,0.436725127492355,0.134864346384821,0.743881101528023,0.523511883968059,0.518459893167171,0,0,1.19613236835183,0.330916980914195,0.583353565032143,0.645799117388655,0.168956125490778,0.234714477291508,1.0416350787516,0.943734099831398,0.483168241652012,0.576060012515731,0.632022241256357,0.608175645870493,0.102710957164827,0.389762468933385,1.25318686967237,1.58945083825012,0.841368146639782,0.443068581523732,0.403865799792591,0.990688486514998,0.705783295957884,1.07203668813728,0.962118416403295,1.40252282617883,0,0,0.0897138566094757,0,0,0,0.915758121336325,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.367687016900028,0.888986911206461,0.206035057238894,0,0.505394423527595,0,0.565879024158229,0.468207537349412,0.384150914429216,0.459483751644906,0.952587382566147,0.347652977834566,1.35036454324594,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0,0.543216455383447,0,0.593175090620871,0.788035859004508,0.409231043169689,0.619747364743864,0.192906610981141,0,0.935726433781634,0.644613162144895,0.382576664137687,0,0.463735671240843
|short_description=p7@Vps54
}}

Latest revision as of 05:03, 27 September 2015

Short description:p7@Vps54
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Vps54_5end
Coexpression cluster:NA
Association with transcript: -309bp_to_ENSMUST00000094375, NM_139061, uc007ido.2, uc007idp.2_5end
EntrezGene:Vps54
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Vps54

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung1.84e-1514
respiratory tube1.84e-1514
respiration organ1.84e-1514
pair of lungs1.84e-1514
lung primordium1.84e-1514
lung bud1.84e-1514
epithelial bud1.95e-1217
thoracic cavity element1.95e-1217
thoracic segment organ1.95e-1217
thoracic cavity1.95e-1217
thoracic segment of trunk1.95e-1217
respiratory primordium1.95e-1217
endoderm of foregut1.95e-1217
epithelial fold2.56e-1020
respiratory tract3.84e-0941
respiratory system7.36e-0942
endo-epithelium3.87e-0769
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:21138567..21138582,%2B&oldid=4294000"