FFCP PHASE1:Mm9::chr4:82151126..82151133,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18028 | |EntrezGene=18028 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2407 | |MCL_coexpression_id=2407 | ||
|TSSclassifier=NA | |||
|UniProt=P97863,F8WHI4,F8WIX3,Q6GSP7,B1AUB6 | |UniProt=P97863,F8WHI4,F8WIX3,Q6GSP7,B1AUB6 | ||
|association_with_transcript=78bp_to_ENSMUST00000050872,ENSMUST00000064770,ENSMUST00000075543,ENSMUST00000107243,ENSMUST00000107250,NM_001113209,NM_001113210,NM_008687,uc008tkb.2,uc008tkc.2,uc008tkd.2,uc008tke.2,uc008tkf.2,uc008tkg.2,uc008tkh.2,uc008tki.2,uc012dgm.1_5end | |association_with_transcript=78bp_to_ENSMUST00000050872,ENSMUST00000064770,ENSMUST00000075543,ENSMUST00000107243,ENSMUST00000107250,NM_001113209,NM_001113210,NM_008687,uc008tkb.2,uc008tkc.2,uc008tkd.2,uc008tke.2,uc008tkf.2,uc008tkg.2,uc008tkh.2,uc008tki.2,uc012dgm.1_5end | ||
|cluster_id=chr4:82151126..82151133,- | |||
|description=CAGE_peak_8_at_Nfib_5end | |description=CAGE_peak_8_at_Nfib_5end | ||
|id=chr4:82151126..82151133,- | |id=chr4:82151126..82151133,- | ||
Latest revision as of 05:46, 27 September 2015
| Short description: | p8@Nfib |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Nfib_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2407 |
| Association with transcript: | 78bp_to_ENSMUST00000050872, ENSMUST00000064770, ENSMUST00000075543, ENSMUST00000107243, ENSMUST00000107250, NM_001113209, NM_001113210, NM_008687, uc008tkb.2, uc008tkc.2, uc008tkd.2, uc008tke.2, uc008tkf.2, uc008tkg.2, uc008tkh.2, uc008tki.2, uc012dgm.1_5end |
| EntrezGene: | Nfib |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lung | 1.31e-14 | 14 |
| respiratory tube | 1.31e-14 | 14 |
| respiration organ | 1.31e-14 | 14 |
| pair of lungs | 1.31e-14 | 14 |
| lung primordium | 1.31e-14 | 14 |
| lung bud | 1.31e-14 | 14 |
| epithelial bud | 2.11e-13 | 17 |
| thoracic cavity element | 2.32e-11 | 17 |
| thoracic segment organ | 2.32e-11 | 17 |
| thoracic cavity | 2.32e-11 | 17 |
| thoracic segment of trunk | 2.32e-11 | 17 |
| respiratory primordium | 2.32e-11 | 17 |
| endoderm of foregut | 2.32e-11 | 17 |
| epithelial fold | 8.92e-11 | 20 |
| primordium | 5.63e-07 | 134 |
| primary circulatory organ | 5.97e-07 | 18 |
| heart | 5.97e-07 | 18 |
| primitive heart tube | 5.97e-07 | 18 |
| primary heart field | 5.97e-07 | 18 |
| anterior lateral plate mesoderm | 5.97e-07 | 18 |
| heart tube | 5.97e-07 | 18 |
| heart primordium | 5.97e-07 | 18 |
| cardiac mesoderm | 5.97e-07 | 18 |
| cardiogenic plate | 5.97e-07 | 18 |
| heart rudiment | 5.97e-07 | 18 |
